Miyakogusa Predicted Gene

Lj3g3v1606140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1606140.1 Non Characterized Hit- tr|K4CA30|K4CA30_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.54,1e-16,DUF740,Uncharacterised protein family UPF0503;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,,CUFF.42865.1
         (577 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g066730.1 | DUF740 family protein | HC | chr7:24313566-243...    99   2e-20

>Medtr7g066730.1 | DUF740 family protein | HC |
           chr7:24313566-24310624 | 20130731
          Length = 746

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 73/146 (50%), Gaps = 15/146 (10%)

Query: 13  HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTT----------PSSSSIVPARKXXXX- 61
           +RPSTSC  HP   FTGFCPSCLCERL VL P            P+SS+   A K     
Sbjct: 30  NRPSTSCETHPQEVFTGFCPSCLCERLAVLDPNNTSTTSSTRKPPTSSTAAAALKAIFRP 89

Query: 62  XXXXXLXXXXXXXXXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDVRVRGAXXXXXX 121
                             PELRR+KSFSASK NE  SG+FEPQRKSCDVR R        
Sbjct: 90  STSQRRPPTSTTASSSLFPELRRTKSFSASK-NEGFSGSFEPQRKSCDVRGRST---LYT 145

Query: 122 XXXXXXEKKIEAVDCRNQASSSSNIQ 147
                 E+KI     +   +SSS +Q
Sbjct: 146 LFNQADERKIPKPQAQEFEASSSTVQ 171



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 143/371 (38%), Gaps = 101/371 (27%)

Query: 189 LKTMKDHIDLDSS-------QTKKPKGSFWSAASVFSKKLXXXXXXXXXXXXXXXEGA-- 239
           LK MK+H+DLDS          K+  GSFWSAASVFSKKL                G+  
Sbjct: 246 LKPMKEHMDLDSQPKKNSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKAKKRGPRNGSVS 305

Query: 240 -----LPAGKPTGRHFRES----------RRSRTT----GSDGGPATLTRDSHWT---PL 277
                LP  KP GR FRE+          RRS  T      D    +   D  ++   P 
Sbjct: 306 GSSTLLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDIARMSFDNDPRYSFDEPR 365

Query: 278 GRGSRLTLGGCRPMIRGTPLTSRXTMLSVVEDAPPPPVNVLRTDAQIPVEEPPVEDD--- 334
                  +G   P +   PL    TMLSVVEDA  P V+V RTD+ IPVEEPPV ++   
Sbjct: 366 ASWDGYLIGKTFPRV---PLP---TMLSVVEDA--PAVHVQRTDSLIPVEEPPVLNENGE 417

Query: 335 ----AVPGGSAQTREYYXXXXX---XXXXXXXXXXXXXXXEIGGDELIRSVSNGSIIXXX 387
                 PG   QT+EYY                        +   + ++ VSN  +    
Sbjct: 418 EINVNFPGNQTQTKEYYSDSSTRRRKSLDRSSSIRKTAAAVVAEMDELKPVSNAKVTPAT 477

Query: 388 XXXXXXXXXX--------XDF-IHGAKMGFQDRGD--------------DCCSEVY---- 420
                              D+ +HG K+  +D  D              D CSE +    
Sbjct: 478 ASVHASASVNPVVNANAGIDYLLHGQKVVDRDLRDYSNNSNSNSNNSLRDDCSESFELGG 537

Query: 421 ------------GNGER------KEEKKSRRWSIWGLIHRR---GRNKDEDDGKCS---- 455
                       G G+R         K    WSIWG IHRR     NK+E+D + S    
Sbjct: 538 FRDNGSVVGSNNGGGDRKGGSKKSSSKWKAAWSIWGFIHRRSGGNNNKEEEDDRYSSRGG 597

Query: 456 RVNGVERCFSE 466
             NGVER +SE
Sbjct: 598 NGNGVERSYSE 608



 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 5/60 (8%)

Query: 520 DEFVLERNRSARYSPS-SVDN-GLLRFYLAPMXXXXXXXXXXXXXXXQAQSIARSVIGLY 577
           DEFVLERNRSARYSP+ S+DN GLLR YL P                QA SIARSV+ LY
Sbjct: 690 DEFVLERNRSARYSPTNSMDNGGLLRLYLTP---SGRRNGASKGRSNQAHSIARSVLRLY 746