Miyakogusa Predicted Gene

Lj3g3v1605120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1605120.1 Non Characterized Hit- tr|Q0AQZ6|Q0AQZ6_MARMM
Putative uncharacterized protein OS=Maricaulis maris
(,47.47,2e-19,DUF962,Protein of unknown function DUF962;
seg,NULL,CUFF.42862.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g014970.1 | transmembrane protein | HC | chr4:4316861-4316...   150   3e-37
Medtr7g066800.1 | transmembrane protein | HC | chr7:24362572-243...   138   9e-34

>Medtr4g014970.1 | transmembrane protein | HC | chr4:4316861-4316523
           | 20130731
          Length = 112

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 81/110 (73%)

Query: 1   MNFRSSEDFWVYYMNHHSKPSTRRWHFVGTLFSIXXXXXXXXXXXXXXXXXXXXGYGCAV 60
           MNF++ E+FW++YMNHHS PSTR+WHF+GTLFSI                     YG A+
Sbjct: 1   MNFKNKEEFWIFYMNHHSNPSTRKWHFIGTLFSIIFLLFSIILTWWFLFLVPLSFYGFAL 60

Query: 61  YSHLFVERNFPATFGYPFWSVLCDLKMFGFMLTGKMDREIKRLGKRPVLQ 110
           YSHLF+E NFP T GYPFWS+ CDLK+F FM++GKMDREIKRLGKRPVLQ
Sbjct: 61  YSHLFIEENFPVTIGYPFWSLYCDLKLFLFMVSGKMDREIKRLGKRPVLQ 110


>Medtr7g066800.1 | transmembrane protein | HC |
           chr7:24362572-24365623 | 20130731
          Length = 112

 Score =  138 bits (348), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 78/112 (69%)

Query: 1   MNFRSSEDFWVYYMNHHSKPSTRRWHFVGTLFSIXXXXXXXXXXXXXXXXXXXXGYGCAV 60
           MNFR+ EDFW +Y++ HSK +TR WHFVGT  S+                    GYGCA 
Sbjct: 1   MNFRNLEDFWAFYVSQHSKRATRHWHFVGTFLSLLFLLCSFLFSWWFLLFVPLSGYGCAW 60

Query: 61  YSHLFVERNFPATFGYPFWSVLCDLKMFGFMLTGKMDREIKRLGKRPVLQVF 112
           YSH FVE+N PATFG+PFWS LCD KMFG MLTG+MDREIKRLGKRPVLQ F
Sbjct: 61  YSHFFVEKNVPATFGHPFWSFLCDYKMFGLMLTGQMDREIKRLGKRPVLQGF 112