Miyakogusa Predicted Gene

Lj3g3v1603940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1603940.1 Non Characterized Hit- tr|D8T269|D8T269_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.61,0.0000000001,Cysteine proteinases,NULL; OTU,Ovarian
tumour, otubain; SUBFAMILY NOT NAMED,NULL; HIV-INDUCED
PROTEI,CUFF.42848.1
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g014750.1 | OTU-like cysteine protease | HC | chr4:4213542...   298   2e-81
Medtr4g014750.2 | OTU-like cysteine protease | HC | chr4:4213542...   233   1e-61
Medtr1g492730.1 | OTU-like cysteine protease | HC | chr1:4156678...    64   6e-11
Medtr1g052405.2 | OTU-like cysteine protease | HC | chr1:2126899...    61   6e-10
Medtr1g052405.1 | OTU-like cysteine protease | HC | chr1:2126899...    61   6e-10
Medtr3g085620.1 | OTU-like cysteine protease | HC | chr3:3871118...    48   5e-06
Medtr1g052380.1 | OTU-like cysteine protease | HC | chr1:2125334...    47   9e-06

>Medtr4g014750.1 | OTU-like cysteine protease | HC |
           chr4:4213542-4209698 | 20130731
          Length = 229

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/203 (72%), Positives = 170/203 (83%), Gaps = 6/203 (2%)

Query: 1   MDHKLFNE-----DILEQMRNGSAKFELVSDSPVPSIAALPNRNASFFGVGNSSSLFFAR 55
           M  KL N+     +IL+Q+++G+AKFE+VS      ++   NRN+S FGVGN S+ FFAR
Sbjct: 1   MAQKLLNDSENDDNILKQLKDGTAKFEIVSSPVASVVSRF-NRNSSLFGVGNCSTHFFAR 59

Query: 56  VGSLFSGQSPAMKKVERLSVHKVTGDGRCLFRALVKGMAHNKGVALNQREERESADELRM 115
           +GS   GQS AMKK+ER SV KVTGDGRCLFRALVKGMAHNKG+ALNQREERE+ADELRM
Sbjct: 60  IGSSIGGQSTAMKKLERFSVQKVTGDGRCLFRALVKGMAHNKGMALNQREERENADELRM 119

Query: 116 AVKEVICENEGERKLYEEALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVI 175
           AVKE ICEN G+RKLYEEA+IA+TVDEPL RYC+RI + DFWGGESELLVLSKLCKQP+I
Sbjct: 120 AVKEAICENVGDRKLYEEAIIAVTVDEPLQRYCRRIGQPDFWGGESELLVLSKLCKQPII 179

Query: 176 VYIPEHEHRGSGRGSGFIPIAEY 198
           VYIPEHEHRG G GSGFIPIAEY
Sbjct: 180 VYIPEHEHRGGGWGSGFIPIAEY 202


>Medtr4g014750.2 | OTU-like cysteine protease | HC |
           chr4:4213542-4209698 | 20130731
          Length = 168

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 117/169 (69%), Positives = 138/169 (81%), Gaps = 6/169 (3%)

Query: 1   MDHKLFNE-----DILEQMRNGSAKFELVSDSPVPSIAALPNRNASFFGVGNSSSLFFAR 55
           M  KL N+     +IL+Q+++G+AKFE+VS      ++   NRN+S FGVGN S+ FFAR
Sbjct: 1   MAQKLLNDSENDDNILKQLKDGTAKFEIVSSPVASVVSRF-NRNSSLFGVGNCSTHFFAR 59

Query: 56  VGSLFSGQSPAMKKVERLSVHKVTGDGRCLFRALVKGMAHNKGVALNQREERESADELRM 115
           +GS   GQS AMKK+ER SV KVTGDGRCLFRALVKGMAHNKG+ALNQREERE+ADELRM
Sbjct: 60  IGSSIGGQSTAMKKLERFSVQKVTGDGRCLFRALVKGMAHNKGMALNQREERENADELRM 119

Query: 116 AVKEVICENEGERKLYEEALIAITVDEPLPRYCKRIVRSDFWGGESELL 164
           AVKE ICEN G+RKLYEEA+IA+TVDEPL RYC+RI + DFWGGESELL
Sbjct: 120 AVKEAICENVGDRKLYEEAIIAVTVDEPLQRYCRRIGQPDFWGGESELL 168


>Medtr1g492730.1 | OTU-like cysteine protease | HC |
           chr1:41566786-41570169 | 20130731
          Length = 305

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 12/107 (11%)

Query: 76  HKVTG---DGRCLFRALVKGMAHNKGV-ALNQREERESADELRMAVKEVICENEGERKLY 131
           ++VTG   DGRCLFRA+  G     G  A N+  +RE ADELR+ V E +     E + +
Sbjct: 165 YRVTGVLADGRCLFRAIAHGACLKNGEEAPNESRQRELADELRVKVAEELLNRRKETEWF 224

Query: 132 EEALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYI 178
                   ++     Y  RI ++  WGGE ELL+ S + K P+ V++
Sbjct: 225 --------IEGDFDTYVTRIQQTYVWGGEPELLMASHVLKTPIYVFM 263


>Medtr1g052405.2 | OTU-like cysteine protease | HC |
           chr1:21268997-21273587 | 20130731
          Length = 337

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 15/126 (11%)

Query: 74  SVHKVTGDGRCLFRALVKGMAHNKGV-ALNQREERESADELRMAVKEVICENEGERKLYE 132
           SV  + GDGRC+FR++  G     G  A ++  +RE AD+LR  V +   +   E + + 
Sbjct: 191 SVIGIPGDGRCMFRSVAHGACLRSGKPAPSESFQRELADDLRAKVADEFIKRREETEWF- 249

Query: 133 EALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGSGF 192
                  ++     Y  +I +   WGGE EL + S + + P+ VY+ + E        G 
Sbjct: 250 -------IEGDFDSYISQIRKPHVWGGEPELFIASHVLQMPITVYMYDQE------AGGL 296

Query: 193 IPIAEY 198
           I IAEY
Sbjct: 297 ISIAEY 302


>Medtr1g052405.1 | OTU-like cysteine protease | HC |
           chr1:21268997-21273669 | 20130731
          Length = 337

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 15/126 (11%)

Query: 74  SVHKVTGDGRCLFRALVKGMAHNKGV-ALNQREERESADELRMAVKEVICENEGERKLYE 132
           SV  + GDGRC+FR++  G     G  A ++  +RE AD+LR  V +   +   E + + 
Sbjct: 191 SVIGIPGDGRCMFRSVAHGACLRSGKPAPSESFQRELADDLRAKVADEFIKRREETEWF- 249

Query: 133 EALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGSGF 192
                  ++     Y  +I +   WGGE EL + S + + P+ VY+ + E        G 
Sbjct: 250 -------IEGDFDSYISQIRKPHVWGGEPELFIASHVLQMPITVYMYDQE------AGGL 296

Query: 193 IPIAEY 198
           I IAEY
Sbjct: 297 ISIAEY 302


>Medtr3g085620.1 | OTU-like cysteine protease | HC |
           chr3:38711189-38713908 | 20130731
          Length = 177

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 78  VTGDGRCLFRALVKGMAHNKG-VALNQREERESADELRMAVKEVICENEGERKLYEEALI 136
           + GDGRC+FR++V G    KG    +   ++E ADELR  V +   +   + + + E   
Sbjct: 43  IPGDGRCMFRSVVYGACLRKGDPPPSLTRQKELADELRAKVVDEFIKRRVDTEWFLEG-- 100

Query: 137 AITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIV 176
                     Y  ++ ++  WGGE ELL+ S + + P+ V
Sbjct: 101 ------DFNTYTVQMRKAQVWGGEPELLMSSHVLQMPITV 134


>Medtr1g052380.1 | OTU-like cysteine protease | HC |
           chr1:21253346-21255101 | 20130731
          Length = 221

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 73  LSVHKVTGDGRCLFRALVKGMAHNKGV-ALNQREERESADELRMAV-KEVICENEGERKL 130
            SV  + GDGRC+FR++  G     G    ++  +RE AD+LR  V  E +   E  ++ 
Sbjct: 56  YSVIGIPGDGRCMFRSIAHGARLRSGKPPPSESIQRELADDLRDKVADEYVKRKEQMKQW 115

Query: 131 YEEALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGS 190
           + E      + +        I +   WG E EL + S + + P+ VY+ +       +  
Sbjct: 116 FIEGDFESNISQ--------IRKPHVWGDEPELFIASHVLQMPIAVYVYDP------KAG 161

Query: 191 GFIPIAEY 198
           G I  +EY
Sbjct: 162 GLISKSEY 169