Miyakogusa Predicted Gene
- Lj3g3v1543510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1543510.1 Non Characterized Hit- tr|I1JFF5|I1JFF5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.5,0,GPROTEINBRPT,G-protein beta WD-40 repeat; WD40
repeats,WD40 repeat; WD40,WD40 repeat; FERTILIZATION-,CUFF.42795.1
(373 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g028310.2 | fertilization-independent endosperm protein | ... 649 0.0
Medtr1g028310.1 | fertilization-independent endosperm protein | ... 649 0.0
Medtr4g011950.1 | coatomer subunit beta-like protein | HC | chr4... 63 4e-10
Medtr2g102277.4 | coatomer subunit beta-like protein | HC | chr2... 63 4e-10
Medtr2g102277.1 | coatomer subunit beta-like protein | HC | chr2... 63 4e-10
Medtr2g102277.2 | coatomer subunit beta-like protein | HC | chr2... 63 4e-10
Medtr2g102277.3 | coatomer subunit beta-like protein | HC | chr2... 63 4e-10
Medtr1g090827.1 | coatomer subunit alpha-like protein | HC | chr... 58 1e-08
Medtr4g071130.1 | coatomer subunit alpha-like protein | HC | chr... 58 1e-08
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 53 4e-07
Medtr8g106790.1 | guanine nucleotide-binding protein beta subuni... 53 5e-07
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 53 6e-07
Medtr2g102267.1 | coatomer subunit beta-like protein | HC | chr2... 52 9e-07
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 50 3e-06
Medtr8g092890.1 | transducin/WD-like repeat-protein | HC | chr8:... 50 5e-06
Medtr2g060520.2 | cleavage stimulation factor 50 kDa subunit | H... 50 5e-06
Medtr1g011610.2 | transcriptional corepressor leunig-like protei... 49 5e-06
Medtr1g011610.1 | transcriptional corepressor leunig-like protei... 49 6e-06
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 49 8e-06
Medtr3g491920.1 | transducin/WD40 repeat protein | HC | chr3:418... 49 8e-06
Medtr2g060520.1 | cleavage stimulation factor 50 kDa subunit | H... 49 1e-05
>Medtr1g028310.2 | fertilization-independent endosperm protein | HC
| chr1:9510205-9513474 | 20130731
Length = 372
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/366 (81%), Positives = 338/366 (92%)
Query: 1 MSKLSALGCEPVTGNPLAPKKRDYKVTNRLQEGKRPLYAVVFNFIDSRYVNVFATVGGNR 60
M KL +LG EPV GN + +K++Y+VTNRLQEGKRPLYAVVFNFIDSRY NVFATVGGNR
Sbjct: 1 MVKLFSLGTEPVVGNLNSSRKKEYRVTNRLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR 60
Query: 61 VTIYQCLEGGVIAVLQSYVDEDKDESFYTVSWACSVDGNPFVVAGGINGIIRVIDTGSEK 120
VTIYQCL+GGVIAVLQS+VD+DKDESFYTVSWAC+ +G P VAGG+NGIIRVI+ EK
Sbjct: 61 VTIYQCLQGGVIAVLQSFVDDDKDESFYTVSWACNTNGAPLAVAGGVNGIIRVINGSDEK 120
Query: 121 IHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLS 180
+HKSFVGHGDS+NEIRTQ ++P+LVISASKDESVRLWNVHTGVC+LIFAGAGGHRNEVLS
Sbjct: 121 LHKSFVGHGDSINEIRTQAMRPALVISASKDESVRLWNVHTGVCVLIFAGAGGHRNEVLS 180
Query: 181 VDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDLPSKFPTKYVQFPIFNATVH 240
+DFHPSD+ KIASCGMDNTVKIWSMK+F YVE+SFTWTD+PSKFPTKYVQFPIFNA+VH
Sbjct: 181 IDFHPSDIFKIASCGMDNTVKIWSMKDFWGYVEQSFTWTDIPSKFPTKYVQFPIFNASVH 240
Query: 241 TNYVDCTRWLGDFVLSKSVDNEILLWEPKVKEQTPGEGVVDVLQRYPVAECDIWFIKFSC 300
TNYVDCTRWLG+F+LSKSVD+EI+LWEPKVKEQ+PGEG D+LQ+YPV ECDIWFIKFSC
Sbjct: 241 TNYVDCTRWLGEFILSKSVDHEIILWEPKVKEQSPGEGAADILQKYPVPECDIWFIKFSC 300
Query: 301 DFHFKEVAIGNREGKIFVWELQSSPPVLVSRLSHLQSKSVIRQTAMSYDGSTILCCCEDG 360
DFHFK AIGNREGKIFVW+LQSSPP+L ++L H QSKS IRQTA+S+DGSTILCCC+DG
Sbjct: 301 DFHFKACAIGNREGKIFVWDLQSSPPILNAKLVHAQSKSPIRQTALSHDGSTILCCCDDG 360
Query: 361 TIWRWD 366
TIWRWD
Sbjct: 361 TIWRWD 366
>Medtr1g028310.1 | fertilization-independent endosperm protein | HC
| chr1:9510205-9513474 | 20130731
Length = 372
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/366 (81%), Positives = 338/366 (92%)
Query: 1 MSKLSALGCEPVTGNPLAPKKRDYKVTNRLQEGKRPLYAVVFNFIDSRYVNVFATVGGNR 60
M KL +LG EPV GN + +K++Y+VTNRLQEGKRPLYAVVFNFIDSRY NVFATVGGNR
Sbjct: 1 MVKLFSLGTEPVVGNLNSSRKKEYRVTNRLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR 60
Query: 61 VTIYQCLEGGVIAVLQSYVDEDKDESFYTVSWACSVDGNPFVVAGGINGIIRVIDTGSEK 120
VTIYQCL+GGVIAVLQS+VD+DKDESFYTVSWAC+ +G P VAGG+NGIIRVI+ EK
Sbjct: 61 VTIYQCLQGGVIAVLQSFVDDDKDESFYTVSWACNTNGAPLAVAGGVNGIIRVINGSDEK 120
Query: 121 IHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLS 180
+HKSFVGHGDS+NEIRTQ ++P+LVISASKDESVRLWNVHTGVC+LIFAGAGGHRNEVLS
Sbjct: 121 LHKSFVGHGDSINEIRTQAMRPALVISASKDESVRLWNVHTGVCVLIFAGAGGHRNEVLS 180
Query: 181 VDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDLPSKFPTKYVQFPIFNATVH 240
+DFHPSD+ KIASCGMDNTVKIWSMK+F YVE+SFTWTD+PSKFPTKYVQFPIFNA+VH
Sbjct: 181 IDFHPSDIFKIASCGMDNTVKIWSMKDFWGYVEQSFTWTDIPSKFPTKYVQFPIFNASVH 240
Query: 241 TNYVDCTRWLGDFVLSKSVDNEILLWEPKVKEQTPGEGVVDVLQRYPVAECDIWFIKFSC 300
TNYVDCTRWLG+F+LSKSVD+EI+LWEPKVKEQ+PGEG D+LQ+YPV ECDIWFIKFSC
Sbjct: 241 TNYVDCTRWLGEFILSKSVDHEIILWEPKVKEQSPGEGAADILQKYPVPECDIWFIKFSC 300
Query: 301 DFHFKEVAIGNREGKIFVWELQSSPPVLVSRLSHLQSKSVIRQTAMSYDGSTILCCCEDG 360
DFHFK AIGNREGKIFVW+LQSSPP+L ++L H QSKS IRQTA+S+DGSTILCCC+DG
Sbjct: 301 DFHFKACAIGNREGKIFVWDLQSSPPILNAKLVHAQSKSPIRQTALSHDGSTILCCCDDG 360
Query: 361 TIWRWD 366
TIWRWD
Sbjct: 361 TIWRWD 366
>Medtr4g011950.1 | coatomer subunit beta-like protein | HC |
chr4:3146350-3132249 | 20130731
Length = 931
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWICTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.4 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056312 | 20130731
Length = 917
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWICTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.1 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 917
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWICTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.2 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 921
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWICTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.3 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056785 | 20130731
Length = 921
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWICTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr1g090827.1 | coatomer subunit alpha-like protein | HC |
chr1:40855860-40850967 | 20130731
Length = 1216
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 97 DGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRL 156
+ P V+GG + I+V + + + +GH D + ++ P ++SAS D+++R+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESP-WIVSASDDQTIRI 119
Query: 157 WNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
WN + CI + GH + V+ FHP D + + S +D TV++W +
Sbjct: 120 WNWQSRTCISVLT---GHNHYVMCALFHPKD-DLVVSASLDQTVRVWDI 164
>Medtr4g071130.1 | coatomer subunit alpha-like protein | HC |
chr4:26807943-26801111 | 20130731
Length = 1206
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 97 DGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRL 156
+ P V+GG + I+V + + + +GH D + ++ P ++SAS D+++R+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHENP-WIVSASDDQTIRI 119
Query: 157 WNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
WN + CI + GH + V+ FHP + + + S +D TV++W +
Sbjct: 120 WNWQSRTCISVLT---GHNHYVMCASFHPKE-DIVVSASLDQTVRVWDI 164
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 43 NFIDSRYVNVFATVGGNRVTIYQCLEGGVIAVLQSYVDEDKDESFYTVSWACSVDGNPF- 101
NF DS V V A + ++ E ++ L + S SVD +PF
Sbjct: 66 NF-DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR-----------SNCTSVDFHPFG 113
Query: 102 --VVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNV 159
+G ++ +++ D + ++ GH VN IR T V+S +D +V+LW++
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF-TPDGRWVVSGGEDNTVKLWDL 172
Query: 160 HTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEF 208
G + F H ++ +DFHPS+ +A+ D TVK W ++ F
Sbjct: 173 TAGKLLHDFK---SHEGQIQCIDFHPSEF-LLATGSADRTVKFWDLETF 217
>Medtr8g106790.1 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr8:45077951-45080671 |
20130731
Length = 325
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DG F ++G +G +R+ D + + FVGH V + ++ ++SAS+D ++
Sbjct: 72 SSDGQ-FALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSV-AFSIDNRQIVSASRDRTI 129
Query: 155 RLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMN-KIASCGMDNTVKIWSM 205
+LWN G C H + V V F PS + I S D TVK+W++
Sbjct: 130 KLWNT-LGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNL 180
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 108/273 (39%), Gaps = 40/273 (14%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DGN A +I T +H+ GH + +N+I + + SAS D+++
Sbjct: 36 SNDGNLLASASLDKTLIIYSSTTLSLLHR-LTGHSEGINDIAWSS-DSHYICSASDDKTL 93
Query: 155 RLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSS-YVE 213
R+W+ +TG C+ GH + V V+F+P N I S D TV++W +K S +V
Sbjct: 94 RIWDANTGDCVKTLR---GHGHNVFCVNFNPQS-NYIVSGSFDETVRVWEVKTGKSVHVI 149
Query: 214 KSFTWTDLPSKFPTKYVQFPIFNATVHTNYVDCTRWLGDFVLSKSVDNEILLWEPKVKEQ 273
K+ P V F G ++S S D +W+
Sbjct: 150 KAHA-------MPVTSVDF---------------NRDGSLIVSGSHDGSCKIWD------ 181
Query: 274 TPGEGVVDVLQRYPVAECDIWFIKFSCDFHFKEVAIGNREGKIFVWELQSSPPVLVSRLS 333
T ++ L V + F KFS + F VA N K++ + S L
Sbjct: 182 TNSGALLKTLIDDKVPA--VSFAKFSPNGKFILVATLNDTLKLWNYAAGRS---LKMYSG 236
Query: 334 HLQSKSVIRQTAMSYDGSTILCCCEDGTIWRWD 366
H+ + T +G I+ ED ++ WD
Sbjct: 237 HVNRVYCLTSTFSVTNGRYIVSGSEDRCLYLWD 269
>Medtr2g102267.1 | coatomer subunit beta-like protein | HC |
chr2:44039290-44042383 | 20130731
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHK--SFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWN 158
+++A + IRV + EK+ K F H D + + P V+SAS D+ ++LWN
Sbjct: 73 WIIAATDDKYIRVYNY--EKMEKIIEFEAHKDYIRSLAVHPFLP-YVVSASDDQVLKLWN 129
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C F G + V+ V F+P D + AS +D T+KIW++
Sbjct: 130 WKKGWSCDETFEGNSHY---VMQVAFNPKDPSTFASASLDGTLKIWTI 174
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 44/230 (19%)
Query: 144 LVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIW 203
++S+S D ++RLW+ ++ + GH V V F P + AS D T ++W
Sbjct: 433 FILSSSADSTIRLWSTKLNANLVCYK---GHNYPVWDVQFSPMG-HYFASSSHDRTARVW 488
Query: 204 SMKEFSSYVEKSFTWTDLPSKFPTKYVQFPIFNATVHTNYVDCTRWLG--DFVLSKSVDN 261
SM P+ H + VDC +W +++ + S D
Sbjct: 489 SMDRIQ-----------------------PLRIMAGHLSDVDCVQWHANCNYIATGSSDK 525
Query: 262 EILLWEPKVKEQTPGEGVVDVLQRYPVAECDIWFIKFSCDFHFKEVAIGNREGKIFVWEL 321
+ LW+ + E ++ + I + S D + +A G+ +G I +W+L
Sbjct: 526 TVRLWDVQSGE---------CVRVFVGHRGMILSLSMSPDGRY--MASGDEDGTIMMWDL 574
Query: 322 QSSPPVLVSRLSHLQSKSVIRQTAMSYDGSTILCCCEDGTIWRWDAVTNS 371
SS + + H S + A S +GS + D T+ WD T++
Sbjct: 575 -SSGRCVTPLVGH---TSCVWSLAFSSEGSILASGSADCTVKLWDVNTST 620
>Medtr8g092890.1 | transducin/WD-like repeat-protein | HC |
chr8:38951241-38954817 | 20130731
Length = 645
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 26/138 (18%)
Query: 101 FVVAGGINGIIRVIDTGSE-KIHKSFVGHGDSVNEIRTQTLKP----------------S 143
++ +GG +G++R+ S K H FV + + +I L+
Sbjct: 244 YLASGGEDGVVRIWRVFSRNKSHPPFVSLPNDIFQIEESPLQELFGHSSDILDLAWSNSD 303
Query: 144 LVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIW 203
+++S+S D++VR W + C+ +F H+ V + F+P + N S +D V+IW
Sbjct: 304 ILLSSSMDKTVRAWKISCDQCLSVFP----HKGFVTCIQFNPVNENYFISGSIDGKVRIW 359
Query: 204 SMKEFSSYVEKSFTWTDL 221
++E E+ W D+
Sbjct: 360 GIRE-----ERVIDWADI 372
>Medtr2g060520.2 | cleavage stimulation factor 50 kDa subunit | HC |
chr2:25669463-25676713 | 20130731
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSF----VGHGDSVNEIRTQTLKPSLVISASKDESVRL 156
F++AG + I + D + + + S ++N++R + S+ ++ASKD ++RL
Sbjct: 120 FLLAGTDHAIPHLYDINTFQCYLSANIPDANPNGAINQVR-YSCSGSMYVTASKDGAIRL 178
Query: 157 WNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSF 216
W+ T C+ A G E S F SD + SCG D+T+K+W + S + K +
Sbjct: 179 WDGITANCVRSITAAHG-TAEATSAVF-TSDQRFVLSCGKDSTIKLWEVG--SGRLVKQY 234
Query: 217 TWTDLPSKFPTKYVQFPIFNATVHTNYVDCTRWLGDFVLS-KSVDNEILLWEPKVKE 272
T+ IFNAT +F+LS ++NE+++W+ E
Sbjct: 235 L-----GAIHTQLRCQAIFNAT------------EEFILSIDELNNEVIIWDAMTTE 274
>Medtr1g011610.2 | transcriptional corepressor leunig-like protein |
HC | chr1:2110664-2100048 | 20130731
Length = 902
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DG + +GG + + + T S K + H + ++R P L S S D++V
Sbjct: 631 SSDGK-LLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS-SYDKTV 688
Query: 155 RLWNV-HTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFS 209
R+W+V + G + F G H V+S+DFHP+ + I SC D ++ WS+ S
Sbjct: 689 RVWDVDNPGYSLRTFTG---HSAAVMSLDFHPNKDDLICSCDCDGEIRYWSINNGS 741
>Medtr1g011610.1 | transcriptional corepressor leunig-like protein |
HC | chr1:2110686-2100048 | 20130731
Length = 893
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DG + +GG + + + T S K + H + ++R P L S S D++V
Sbjct: 622 SSDGK-LLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATS-SYDKTV 679
Query: 155 RLWNV-HTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFS 209
R+W+V + G + F G H V+S+DFHP+ + I SC D ++ WS+ S
Sbjct: 680 RVWDVDNPGYSLRTFTG---HSAAVMSLDFHPNKDDLICSCDCDGEIRYWSINNGS 732
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 39/226 (17%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKP--SLVISASKDESVRLWN 158
++V+ + IR+ D + + K+ GH N + P ++++S S DE+VR+W+
Sbjct: 92 YLVSASDDKTIRLWDVPTGSLVKTLHGH---TNYVFCVNFNPQSNVIVSGSFDETVRVWD 148
Query: 159 VHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTW 218
V +G C+ + H + V +VDF+ D I S D +IW + + K+
Sbjct: 149 VKSGKCLKVLP---AHSDPVTAVDFN-RDGTLIVSSSYDGLCRIWDAS--TGHCIKTLID 202
Query: 219 TDLPSKFPTKYVQFPIFNATVHTNYVDCTRWLGDFVLSKSVDNEILLWEPKVKEQTPGEG 278
+ P P YV+F NA F+L ++DN + LW +
Sbjct: 203 DENP---PVSYVKFSP-NA--------------KFILVGTLDNNLRLWNYSTGK------ 238
Query: 279 VVDVLQRYPVAECDIWFIKFSCDF-HFKEVAIGNREGKIFVWELQS 323
L+ Y + I S + K V G+ + I++W LQS
Sbjct: 239 ---FLKTYTGHVNSKYCISSSFSITNGKYVVGGSEDNCIYLWGLQS 281
>Medtr3g491920.1 | transducin/WD40 repeat protein | HC |
chr3:41863790-41858899 | 20130731
Length = 702
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 119 EKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEV 178
EK F GH V ++ K + ++S+S D++VRLW V+ C+ +F+ H N V
Sbjct: 342 EKPLHEFRGHRSEVLDLSWS--KKNYLLSSSTDKTVRLWQVNRDHCLEVFS----HSNYV 395
Query: 179 LSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDL 221
+ F+P D + S +D V+IW++ + S V+ WTD+
Sbjct: 396 TCIQFNPVDEDYFISGSIDGKVRIWTIPD-SQVVD----WTDV 433
>Medtr2g060520.1 | cleavage stimulation factor 50 kDa subunit | HC |
chr2:25668836-25676713 | 20130731
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSF----VGHGDSVNEIRTQTLKPSLVISASKDESVRL 156
F++AG + I + D + + + S ++N++R + S+ ++ASKD ++RL
Sbjct: 240 FLLAGTDHAIPHLYDINTFQCYLSANIPDANPNGAINQVR-YSCSGSMYVTASKDGAIRL 298
Query: 157 WNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSF 216
W+ T C+ A G E S F SD + SCG D+T+K+W + S + K +
Sbjct: 299 WDGITANCVRSITAAHG-TAEATSAVF-TSDQRFVLSCGKDSTIKLWEVG--SGRLVKQY 354
Query: 217 TWTDLPSKFPTKYVQFPIFNATVHTNYVDCTRWLGDFVLS-KSVDNEILLWEPKVKE 272
T+ IFNAT +F+LS ++NE+++W+ E
Sbjct: 355 L-----GAIHTQLRCQAIFNAT------------EEFILSIDELNNEVIIWDAMTTE 394