Miyakogusa Predicted Gene

Lj3g3v1543500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1543500.1 tr|A9SV53|A9SV53_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,39.29,0.00000002,coiled-coil,NULL; seg,NULL,CUFF.42787.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g082930.1 | hypothetical protein | HC | chr2:34780062-3478...   113   4e-26

>Medtr2g082930.1 | hypothetical protein | HC |
           chr2:34780062-34780849 | 20130731
          Length = 215

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 63/87 (72%)

Query: 1   MGKEFGSAELLAKVGXXXXXXXXXXXXXXXXXGKVEERMVTELFRVLKLMEMDLAMVKAA 60
           M KEFGS ELLAKVG                 GKVEERMV ELFRVL+LMEMDLAMVKA+
Sbjct: 129 MKKEFGSTELLAKVGEIVAERAREEAEILRDEGKVEERMVVELFRVLRLMEMDLAMVKAS 188

Query: 61  VKDETLGERLQQAKARGRQAILVAYSF 87
           VK++TL ERL QAKAR RQAILV YSF
Sbjct: 189 VKEDTLNERLDQAKARCRQAILVCYSF 215