Miyakogusa Predicted Gene
- Lj3g3v1543490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1543490.1 tr|A9TJS1|A9TJS1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_170480,24.84,8e-16,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR_2,P,CUFF.42785.1
(292 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g081220.1 | PPR containing plant-like protein | HC | chr4:... 257 7e-69
Medtr4g133410.1 | PPR containing protein, putative | HC | chr4:5... 124 1e-28
Medtr4g133410.8 | PPR containing protein, putative | HC | chr4:5... 124 1e-28
Medtr7g025580.1 | PPR repeat protein | LC | chr7:8520924-8516590... 121 6e-28
Medtr4g133410.10 | PPR containing protein, putative | HC | chr4:... 120 1e-27
Medtr4g133410.9 | PPR containing protein, putative | HC | chr4:5... 120 1e-27
Medtr2g082940.1 | PPR containing plant protein, putative | HC | ... 119 3e-27
Medtr7g007510.1 | PPR domain protein | LC | chr7:1521936-1527121... 119 3e-27
Medtr4g133410.14 | PPR containing protein, putative | HC | chr4:... 119 4e-27
Medtr4g133410.5 | PPR containing protein, putative | HC | chr4:5... 118 5e-27
Medtr4g133410.12 | PPR containing protein, putative | HC | chr4:... 118 5e-27
Medtr4g133410.13 | PPR containing protein, putative | HC | chr4:... 117 1e-26
Medtr5g034890.1 | hypothetical protein | LC | chr5:15168022-1517... 117 2e-26
Medtr4g133410.3 | PPR containing protein, putative | HC | chr4:5... 116 2e-26
Medtr4g133410.7 | PPR containing protein, putative | HC | chr4:5... 116 2e-26
Medtr7g025530.1 | PPR repeat protein | HC | chr7:8494039-8489677... 115 5e-26
Medtr8g070020.1 | hypothetical protein | HC | chr8:29709016-2971... 114 9e-26
Medtr4g133410.2 | PPR containing protein, putative | HC | chr4:5... 114 1e-25
Medtr4g133410.6 | PPR containing protein, putative | HC | chr4:5... 114 1e-25
Medtr4g133410.4 | PPR containing protein, putative | HC | chr4:5... 114 1e-25
Medtr4g133410.11 | PPR containing protein, putative | HC | chr4:... 113 3e-25
Medtr4g133410.15 | PPR containing protein, putative | HC | chr4:... 75 7e-14
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 4e-09
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 58 9e-09
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 9e-09
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 58 1e-08
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 57 2e-08
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 57 2e-08
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 56 3e-08
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 56 4e-08
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 55 7e-08
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 55 8e-08
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 55 9e-08
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 55 1e-07
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 54 1e-07
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 53 3e-07
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 53 3e-07
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 53 3e-07
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 53 4e-07
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 52 5e-07
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 52 6e-07
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 52 6e-07
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 7e-07
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 52 7e-07
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 52 8e-07
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 52 8e-07
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 51 1e-06
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 51 1e-06
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 51 1e-06
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 51 2e-06
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 50 2e-06
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr1g008360.1 | PPR containing plant-like protein | HC | chr1:... 50 3e-06
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 50 3e-06
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 3e-06
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 49 4e-06
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 49 4e-06
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 4e-06
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 49 4e-06
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 49 4e-06
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 49 4e-06
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 49 5e-06
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 49 5e-06
Medtr1g072300.2 | PPR containing plant protein | HC | chr1:32088... 49 6e-06
Medtr1g072300.1 | PPR containing plant protein | HC | chr1:32088... 49 6e-06
Medtr1g072300.3 | PPR containing plant protein | HC | chr1:32088... 49 6e-06
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 49 6e-06
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 7e-06
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 49 7e-06
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 49 8e-06
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 48 9e-06
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 9e-06
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 48 9e-06
>Medtr4g081220.1 | PPR containing plant-like protein | HC |
chr4:31456316-31468677 | 20130731
Length = 873
Score = 257 bits (657), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 185/287 (64%), Gaps = 2/287 (0%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++ +++KDFE AYKM+++L + PTT MYNAIMA FRE+NIS +RV + MQ A+
Sbjct: 468 LVHFCVRLKDFERAYKMVNELHELGFKPTTAMYNAIMAGYFREKNISGALRVLKHMQEAN 527
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVI 120
+KPDSQT+S+LI N ET++DI Y +E+ S ++ TKQI+ AL+NAYA+CG+ E+AK+V+
Sbjct: 528 VKPDSQTFSYLIGNCETKDDINMYRDEMTKSEIKLTKQIYMALVNAYAACGEFEEAKKVV 587
Query: 121 LDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIR-SD 179
D +SLN+IKSVLVS LASHG+L EA +IY EIK+ GH LEPK V+SLI+ +R
Sbjct: 588 -DDQSTSKSLNEIKSVLVSALASHGRLSEALVIYKEIKKAGHNLEPKAVISLIDAMRYRS 646
Query: 180 GXXXXXXXXXXXSKGTDHWNDACCRIILYCIWNKQLSSAIDXXXXXXXXXXXXXXFMEVL 239
G ++W D C R+I YC+ N LS+ +D EVL
Sbjct: 647 GELDRLLLLLMDLSDQNYWVDGCFRVIQYCVQNNHLSTTVDLLKQLKDTFESDETMTEVL 706
Query: 240 FDKVFSLIERSESNHLNTCLNLLSEIRDKIGTLPSQKCYDSLFCAPA 286
FD +SLI ES L L+LL I+D++G +PS++C D L A A
Sbjct: 707 FDAAYSLIAGCESTRLQFGLDLLWAIKDELGLVPSRQCLDFLLRACA 753
>Medtr4g133410.1 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 520
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 67/298 (22%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERDN-------- 317
Query: 128 RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXX 187
K VL ++ HG+L L+ E+
Sbjct: 318 ------KDVLWNL---HGELERVLLLLKEL------------------------------ 338
Query: 188 XXXXSKGTDHWNDACCRIILYCIWNKQLSSAI-------DXXXXXXXXXXXXXXF--MEV 238
G D W D C I Y + NK LSS I D F ++
Sbjct: 339 -----SGQD-WVDGCRWAIRYSVQNKNLSSTIELFKQLKDYYKNDAPERSDPLYFGSKKL 392
Query: 239 LF---DKVFSLIERSESNHLNTCLNLLSEIRDKIGTLPSQKCYDSL--FCAPADAIDS 291
+F + F ++E + +L L+LL I+ ++G +PSQ C D L CA ++ +++
Sbjct: 393 VFNVDEAYFLMLEIRSTTYLQFGLDLLDLIKKELGLVPSQTCLDVLLKLCALSEDLNN 450
>Medtr4g133410.8 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 386
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 67/298 (22%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 72 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 131
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + +
Sbjct: 132 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERDN-------- 183
Query: 128 RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXX 187
K VL ++ HG+L L+ E+
Sbjct: 184 ------KDVLWNL---HGELERVLLLLKEL------------------------------ 204
Query: 188 XXXXSKGTDHWNDACCRIILYCIWNKQLSSAI-------DXXXXXXXXXXXXXXF--MEV 238
G D W D C I Y + NK LSS I D F ++
Sbjct: 205 -----SGQD-WVDGCRWAIRYSVQNKNLSSTIELFKQLKDYYKNDAPERSDPLYFGSKKL 258
Query: 239 LF---DKVFSLIERSESNHLNTCLNLLSEIRDKIGTLPSQKCYDSL--FCAPADAIDS 291
+F + F ++E + +L L+LL I+ ++G +PSQ C D L CA ++ +++
Sbjct: 259 VFNVDEAYFLMLEIRSTTYLQFGLDLLDLIKKELGLVPSQTCLDVLLKLCALSEDLNN 316
>Medtr7g025580.1 | PPR repeat protein | LC | chr7:8520924-8516590 |
20130731
Length = 694
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 150/330 (45%), Gaps = 50/330 (15%)
Query: 10 DFEGAYKMLDDLKGM-NMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTY 68
+ E K +++L G+ + PT +Y ++ C + + + + ++M A P S
Sbjct: 270 EVEHIIKEIENLHGLLKISPTFSLYEKLILYCCGKNKVDVAINIIDKMCEAYFMPSSHVM 329
Query: 69 SHLISN-SETEED----------------------------------IVKYYEELKHSGM 93
++ SET +D + YYEE++ SG+
Sbjct: 330 QSVLETCSETNQDFQVDQISSILSRHRLHHFKINKKIYWLSAHFSVVMKDYYEEMEQSGI 389
Query: 94 RATKQIFTALINAYASCGQLEKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLI 153
K++F AL++AYA+ + EKAKQV+ D IP++ L +IK +LVS LASHG+L EA ++
Sbjct: 390 NFAKEVFVALLHAYAAYDEFEKAKQVVQDQRIPVKWLIEIKRMLVSSLASHGKLSEALVL 449
Query: 154 YNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXXXXXXSKGTDHWNDACCRIILYCIWNK 213
EIK+ G TL P+ V+ L++ + S G G D W C ++ Y + K
Sbjct: 450 LEEIKKAGQTLNPRAVLCLMDVLCSHGELERGLLLRTGLSGED-WVKGCEMVMQYSVQYK 508
Query: 214 QLSSAIDXXXXXXXXXXXXXXF------------MEVLFDKVFSLIERSESNHLNTCLNL 261
LSS I+ F M L + F LI + S HL L+L
Sbjct: 509 NLSSTIEMFKQLKDHFESDDAFKRGIHFEGSRTRMRRLCAEAFYLIFKHGSTHLQFGLDL 568
Query: 262 LSEIRDK-IGTLPSQKCYDSLFCAPADAID 290
L I+ + +G +PS++C + L A + D
Sbjct: 569 LDLIKKEVVGLVPSRQCLNYLLSVCAKSRD 598
>Medtr4g133410.10 | PPR containing protein, putative | HC |
chr4:55806806-55802637 | 20130731
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 97/147 (65%), Gaps = 5/147 (3%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 325
Query: 128 RSLNQIKSVLVSVLA---SHGQLFEAF 151
R L S LV V+A SHG++ + +
Sbjct: 326 RFL--FWSDLVKVIACCKSHGRVLDYY 350
>Medtr4g133410.9 | PPR containing protein, putative | HC |
chr4:55806806-55802637 | 20130731
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 97/147 (65%), Gaps = 5/147 (3%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 325
Query: 128 RSLNQIKSVLVSVLA---SHGQLFEAF 151
R L S LV V+A SHG++ + +
Sbjct: 326 RFL--FWSDLVKVIACCKSHGRVLDYY 350
>Medtr2g082940.1 | PPR containing plant protein, putative | HC |
chr2:34787790-34781597 | 20130731
Length = 523
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 70/117 (59%)
Query: 172 LIEHIRSDGXXXXXXXXXXXSKGTDHWNDACCRIILYCIWNKQLSSAIDXXXXXXXXXXX 231
L EH SDG T +WNDACCRIIL CIWNK+LSSAID
Sbjct: 399 LKEHNCSDGEFDQLLLLLEELNDTSYWNDACCRIILCCIWNKRLSSAIDLCKLLKDKLQM 458
Query: 232 XXXFMEVLFDKVFSLIERSESNHLNTCLNLLSEIRDKIGTLPSQKCYDSLFCAPADA 288
M VLFDKVFS IE SE+NH TCL L E++DK+G PSQK YDSLF + A+A
Sbjct: 459 DELVMNVLFDKVFSRIEESETNHRQTCLELFLEMKDKLGLWPSQKYYDSLFVSSANA 515
>Medtr7g007510.1 | PPR domain protein | LC | chr7:1521936-1527121 |
20130731
Length = 667
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 134/286 (46%), Gaps = 37/286 (12%)
Query: 24 MNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLISN-SETEED-- 80
MN+ P++ Y ++ C + + + V ++M A P S ++ SET D
Sbjct: 326 MNISPSSSTYEKLILYCCGKNKVDAAIYVVDKMCEAFCMPSSHVMQSVLETCSETNLDFQ 385
Query: 81 --------------------------------IVKYYEELKHSGMRATKQIFTALINAYA 108
+ YYEE++ SG+ +K++F ALI+AYA
Sbjct: 386 VDQIYSILSHHREYYFEYKKKICSLSLHFGAVMKDYYEEMEQSGIHFSKEVFVALIHAYA 445
Query: 109 SCGQLEKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKD 168
+ + EKAKQ++LDP I ++ L +IKS+LVS LASHG+L EA ++ EIK+ G TL PK
Sbjct: 446 AYDEFEKAKQIVLDPRIQVKWLIEIKSMLVSSLASHGKLSEALVLLEEIKKAGQTLNPKA 505
Query: 169 VMSLIEHI-RSDGXXXXXXXXXXXSKGTDHWNDACCRIILYCIWNKQLSSAIDXXXXXXX 227
+ L++ + G G D W C +I + + NK LSS I+
Sbjct: 506 NLCLMDVLCNLHGELERSLLLLTELSGED-WVQGCKIVIQFSVENKNLSSTIEMFKQLMD 564
Query: 228 XXXXXXXFMEVLFDKVFSLIERSESNHLNTCLNLLSEIRDKIGTLP 273
+FD+V+ I S HL L+LL I+ ++G +P
Sbjct: 565 YFKHGENKSNSVFDEVYYPILVYGSTHLQFGLDLLDLIKKELGLVP 610
>Medtr4g133410.14 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 210
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 93/141 (65%), Gaps = 5/141 (3%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 72 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 131
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 132 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 191
Query: 128 RSLNQIKSVLVSVLA---SHG 145
R L S LV V+A SHG
Sbjct: 192 RFL--FWSDLVKVIACCKSHG 210
>Medtr4g133410.5 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 344
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 93/141 (65%), Gaps = 5/141 (3%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 325
Query: 128 RSLNQIKSVLVSVLA---SHG 145
R L S LV V+A SHG
Sbjct: 326 RFL--FWSDLVKVIACCKSHG 344
>Medtr4g133410.12 | PPR containing protein, putative | HC |
chr4:55806827-55802701 | 20130731
Length = 344
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 93/141 (65%), Gaps = 5/141 (3%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 325
Query: 128 RSLNQIKSVLVSVLA---SHG 145
R L S LV V+A SHG
Sbjct: 326 RFL--FWSDLVKVIACCKSHG 344
>Medtr4g133410.13 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 205
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 72 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 131
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 132 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 191
Query: 128 RSLNQIKSVLVSVLA 142
R L S LV V+A
Sbjct: 192 RFL--FWSDLVKVIA 204
>Medtr5g034890.1 | hypothetical protein | LC |
chr5:15168022-15171475 | 20130731
Length = 594
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 77/103 (74%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+NI G+RV +QM+ A+IK DS T
Sbjct: 253 MKDFECAYKMVNELQKKYYKYKTTMYNAIMARYFFEKNIIGGLRVLKQMRDANIKLDSYT 312
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASC 110
+S+LI N ET+E+I KYYEE++ SG TK++F ALI+AYA+C
Sbjct: 313 FSYLIGNCETKEEIKKYYEEMEQSGTHLTKEVFVALIHAYAAC 355
>Medtr4g133410.3 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 339
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 325
Query: 128 RSLNQIKSVLVSVLA 142
R L S LV V+A
Sbjct: 326 RFL--FWSDLVKVIA 338
>Medtr4g133410.7 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 339
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + + + ++ +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERVCLFKYVVFL 325
Query: 128 RSLNQIKSVLVSVLA 142
R L S LV V+A
Sbjct: 326 RFL--FWSDLVKVIA 338
>Medtr7g025530.1 | PPR repeat protein | HC | chr7:8494039-8489677 |
20130731
Length = 687
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 14/220 (6%)
Query: 84 YYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPMRSLNQIKSVLVSVLAS 143
YYEE++ S + K++F AL++AYA+ + EKAKQV+ D IP++ L +IK +LVS LAS
Sbjct: 373 YYEEMEQSEINFAKEVFVALLHAYAAYDEFEKAKQVVQDQRIPVKWLIEIKRMLVSSLAS 432
Query: 144 HGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXXXXXXSKGTDHWNDACC 203
HG+L EA ++ EIK+ G TL P+ V+ L++ + S G G D W + C
Sbjct: 433 HGKLSEALVLLEEIKKAGQTLNPRAVLCLMDVLCSHGELERGLLLRTGLSGED-WVEGCE 491
Query: 204 RIILYCIWNKQLSSAIDXXXXXXXXXXXXXXF------------MEVLFDKVFSLIERSE 251
++ Y + K LSS I+ F M L + F LI +
Sbjct: 492 MVMQYSVQYKNLSSTIEMFKQLKDHFESDDAFKRGILFGGSRTRMYRLCAEAFYLIFKHG 551
Query: 252 SNHLNTCLNLLSEIRDK-IGTLPSQKCYDSLFCAPADAID 290
S HL L+LL I+ + +G +PS +C + L A + D
Sbjct: 552 STHLQFGLDLLDLIKKEVVGLVPSSECLNYLLSVCAKSRD 591
>Medtr8g070020.1 | hypothetical protein | HC |
chr8:29709016-29712073 | 20130731
Length = 412
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G++V +QM+ A+IK DS T
Sbjct: 192 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLKVLKQMRDANIKLDSYT 251
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQ 112
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+
Sbjct: 252 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGE 296
>Medtr4g133410.2 | PPR containing protein, putative | HC |
chr4:55806769-55803228 | 20130731
Length = 406
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 53/213 (24%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERDN-------- 317
Query: 128 RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXX 187
K VL ++ HG+L L+ E+
Sbjct: 318 ------KDVLWNL---HGELERVLLLLKEL------------------------------ 338
Query: 188 XXXXSKGTDHWNDACCRIILYCIWNKQLSSAID 220
G D W D C I Y + NK LSS I+
Sbjct: 339 -----SGQD-WVDGCRWAIRYSVQNKNLSSTIE 365
>Medtr4g133410.6 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 406
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 53/213 (24%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERDN-------- 317
Query: 128 RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXX 187
K VL ++ HG+L L+ E+
Sbjct: 318 ------KDVLWNL---HGELERVLLLLKEL------------------------------ 338
Query: 188 XXXXSKGTDHWNDACCRIILYCIWNKQLSSAID 220
G D W D C I Y + NK LSS I+
Sbjct: 339 -----SGQD-WVDGCRWAIRYSVQNKNLSSTIE 365
>Medtr4g133410.4 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 406
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 53/213 (24%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + +
Sbjct: 266 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERDN-------- 317
Query: 128 RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXX 187
K VL ++ HG+L L+ E+
Sbjct: 318 ------KDVLWNL---HGELERVLLLLKEL------------------------------ 338
Query: 188 XXXXSKGTDHWNDACCRIILYCIWNKQLSSAID 220
G D W D C I Y + NK LSS I+
Sbjct: 339 -----SGQD-WVDGCRWAIRYSVQNKNLSSTIE 365
>Medtr4g133410.11 | PPR containing protein, putative | HC |
chr4:55806827-55802637 | 20130731
Length = 272
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 53/213 (24%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 72 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 131
Query: 68 YSHLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM 127
+S+LI N ET+E+I KYYEE++ SG+ TK++F ALI+AY CG+ + +
Sbjct: 132 FSYLIENCETKEEIKKYYEEMEQSGIHLTKEVFVALIHAYVPCGEYYEERDN-------- 183
Query: 128 RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIEHIRSDGXXXXXXX 187
K VL ++ HG+L L+ E+
Sbjct: 184 ------KDVLWNL---HGELERVLLLLKEL------------------------------ 204
Query: 188 XXXXSKGTDHWNDACCRIILYCIWNKQLSSAID 220
G D W D C I Y + NK LSS I+
Sbjct: 205 -----SGQD-WVDGCRWAIRYSVQNKNLSSTIE 231
>Medtr4g133410.15 | PPR containing protein, putative | HC |
chr4:55806827-55804370 | 20130731
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 8 MKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQT 67
MKDFE AYKM+++L+ T MYNAIMA F E+N G+ V +QM+ A++K DS T
Sbjct: 206 MKDFECAYKMVNELQKKYFKYKTTMYNAIMAGYFFEKNKIGGLEVLKQMRDANVKLDSYT 265
Query: 68 YSHLISNSETEEDIVK 83
+S+LI N ET+E+I K
Sbjct: 266 FSYLIENCETKEEIKK 281
>Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:9664816-9662405 | 20130731
Length = 691
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I ++ + +++G + +D+K + + P +YNA++ R + D V+++M+
Sbjct: 260 LIKMYGILGNYDGCLSVYNDMKVLGVRPNMVLYNALLYAMGRAKRARDAKGVYQEMKKNG 319
Query: 61 IKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
P+ TY+ L+ S ++ + Y+E+K GM K +++ L++ A G +++A
Sbjct: 320 FVPNWGTYAALLEAYSRGRLSKEALSVYKEMKEKGMSMNKVLYSMLLDMCADVGFVDEAV 379
Query: 118 QVILDPLIPM--RSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEP 166
++ D M + N I + L+++ + +G++ EA + E+ G LEP
Sbjct: 380 EIFEDMKCSMTCQPDNYIYTSLINMYSWNGKIPEAEAMLKEMISCG--LEP 428
>Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:9674893-9670547 | 20130731
Length = 687
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I +F +++G M ++KG+ + MYN ++ R + ++++M+
Sbjct: 258 LIKMFDLNGNYDGCLNMHLEMKGLGVKANVEMYNVLLVAMLRGKRHWQAKTIYQEMKSNG 317
Query: 61 IKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ PD TYS L+ + ++ +D + Y+E+K GM + ++ L+ A G ++A
Sbjct: 318 VSPDFTTYSTLLRIYTRAQFGQDAISVYKEMKGKGMNVSIDLYNVLLAMCADVGCNDEAL 377
Query: 118 QVILDPLIPMRSLNQ---IKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEP 166
++ D + R+ S L++V ++ G++FEA + +E+ + G EP
Sbjct: 378 EIFQD-IKNSRTCTPDSWTFSALINVYSNTGKVFEAEAMLDEMIKSG--FEP 426
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ K +E A +LD + G+ P +N ++ E FR+ ++ + RVF +M
Sbjct: 147 LINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCG 206
Query: 61 IKPDSQTYSHLIS----NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
+ PD ++S +I N E + Y+E++K G+ I+T LIN Y + A
Sbjct: 207 VVPDLISFSSIIGVFSRNGELGRALA-YFEKMKGVGLVPDTVIYTILINGYCRNNDVSGA 265
Query: 117 KQV 119
+V
Sbjct: 266 LKV 268
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+++ D + + ++ D + P YNAI+ R ++ + +F ++Q
Sbjct: 153 LINMYTACGDIDASRRVFDKIDE----PCVVAYNAIIMSLARNNRANEALALFRELQEIG 208
Query: 61 IKPDSQTYSHLISNSE--TEEDIVKY-YEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+KP T ++S+ D+ ++ +E +K G ++ T LI+ YA CG L+ A
Sbjct: 209 LKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAV 268
Query: 118 QVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSL 172
V D +P R Q S ++ A+HG F+A + NE+K+ ++P ++ L
Sbjct: 269 NVFRD--MPKRD-TQAWSAIIVAYATHGDGFQAISMLNEMKK--EKVQPDEITFL 318
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I ++ K + + ++ D + + + +NA ++ + + + +F M+
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFI----TWNAAISAYAQNGMADEAISLFHSMKENG 315
Query: 61 IKPDSQTYSHLISN--SETEEDIVKYYEEL-KHSGMRATKQIFTALINAYASCGQLEKAK 117
+ P+ T + ++S S D+ K +E H G++ + TALI+ YA CG LE A+
Sbjct: 316 VDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQ 375
Query: 118 QVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDV 169
+V D +P R + + ++S LASHG+ EA ++ + G + P D+
Sbjct: 376 RVFND--MP-RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDI 424
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID F KM D E A K +L + + P T +YN++++ N+ + + ++M
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704
Query: 61 IKPDSQTYSHLISNSETEEDI---VKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ D Q Y+ +I E + + Y E+ + ++T LIN ++ GQLE A
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENAS 764
Query: 118 QVILDPLIPMRSLNQIKSVLV-SVLAS----HGQLFEAFLIYNEIKQVGHTLEPKD 168
+++ + M N SVLV ++L + G L EAF +++E+ G L P D
Sbjct: 765 KILKE----MDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKG--LVPDD 814
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D + K + A K+ ++ ++V T M A + + + ++++ QMQ AD
Sbjct: 428 LLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYS----QHGDAEEALKLYLQMQVAD 483
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELKHSGMRATKQIF-------TALINAYASCGQL 113
IKPD S L++ + YE+ K + A K F +L+N YA CG +
Sbjct: 484 IKPDPFVCSSLLNACAN----LSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSI 539
Query: 114 EKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEI 157
E A + + IP R + S ++ LA HG EA +++N++
Sbjct: 540 EDADRAFSE--IPQRGIVSW-SAMIGGLAQHGHGKEALIMFNQM 580
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I ++++ D + A ++ + N V +N+++A C R+ + + +F +MQ A
Sbjct: 227 LIARYIRLGDVQAARRVFGCMPERNAVS----WNSMIAGCVSVRDYAGALELFSEMQNAG 282
Query: 61 IKPDSQTY-SHLISNSETE--EDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+KP T S L + +ET E K YE LK + + AL+N Y CG L A
Sbjct: 283 VKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAW 342
Query: 118 QVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQ-VGHTLEPKDV 169
++ + M++++ ++++ LA HG E F ++ E+++ +G ++ P V
Sbjct: 343 EIFNG--MKMKTVSCWNAMVIG-LAVHGYCEEVFQLFTEMEESLGGSIRPDRV 392
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I ++++ D + A ++ + N V +N+++A C R+ + + +F +MQ A
Sbjct: 229 LIARYIRLGDVQAARRVFGCMPERNAVS----WNSMIAGCVSVRDYAGALELFSEMQNAG 284
Query: 61 IKPDSQTY-SHLISNSETE--EDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+KP T S L + +ET E K YE LK + + AL+N Y CG L A
Sbjct: 285 VKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAW 344
Query: 118 QVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQ-VGHTLEPKDV 169
++ + M++++ ++++ LA HG E F ++ E+++ +G ++ P V
Sbjct: 345 EIFNG--MKMKTVSCWNAMVIG-LAVHGYCEEVFQLFTEMEESLGGSIRPDRV 394
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D + K + A K+ ++ ++V T M A + + + ++++ QMQ AD
Sbjct: 428 LLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYS----QHGDAEEALKLYLQMQVAD 483
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELKHSGMRATKQIF-------TALINAYASCGQL 113
IKPD S L++ + YE+ K + A K F +L+N YA CG +
Sbjct: 484 IKPDPFVCSSLLNACAN----LSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSI 539
Query: 114 EKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEI 157
E A + + IP R + S ++ LA HG EA +++N++
Sbjct: 540 EDADRAFSE--IPQRGIVSW-SAMIGGLAQHGHGKEALIMFNQM 580
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ K +E A ++LD++ G+ + P +N ++ E R+ ++ + RVF +M
Sbjct: 314 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 373
Query: 61 IKPDSQTYSHLIS----NSETEEDIVKYYEELKHSGMRATKQIFTALINAY 107
+ PD ++S ++ N E + Y+E++K G+ I+T LIN Y
Sbjct: 374 VVPDLISFSSIVGVFSRNGELGRALA-YFEKMKGVGLVPDTVIYTILINGY 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ + + D GA KM +++ V YN ++ R + + D +F++M
Sbjct: 419 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 478
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELKHSGMRATKQ---IFTALINAYASCGQLEKAK 117
+ PD T + LI + ++ K + +R+ K + L++ + G++EKAK
Sbjct: 479 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 538
Query: 118 QVILDPLIPMRSLNQIK-SVLVSVLASHGQLFEAFLIYNEIKQVG 161
++ D + + I S+L++ S G + EAF +++E+K+ G
Sbjct: 539 ELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 583
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ F + A+++ D++K + PT N I+ R N+S M
Sbjct: 559 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 618
Query: 61 IKPDSQTYSHLISNSETEEDIVKYY---EELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ PD TY+ LI++ EE+ + + ++ G+ + A++ ++ G++++A
Sbjct: 619 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEA- 677
Query: 118 QVILDPLIPMRSLNQIKSVLVSVL---ASHGQLFEAFLIYNEIKQVGHTLEPK 167
+++L +I + +N KS S++ S + EAF +++E+ Q G + K
Sbjct: 678 EMVLHKMID-KGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDK 729
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 14 AYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLIS 73
A ++LD++ + P YN +++ C RE N+ + + VF M+ +PD TY+ +IS
Sbjct: 320 AIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMIS 379
Query: 74 NSETEEDIVK---YYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPM--R 128
+K +E+LK +G + +L+ A++ G EK + I + ++ M
Sbjct: 380 VYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRD-ISEEMVKMGFG 438
Query: 129 SLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGH 162
+ ++ + HG+ EA +Y ++K G
Sbjct: 439 KDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGR 472
>Medtr1g114300.1 | PPR containing plant-like protein | HC |
chr1:51588477-51583476 | 20130731
Length = 553
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
MI ++ K E A + + + T YN++M+ E N + +++QMQ AD
Sbjct: 254 MIYMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMS---FETNYKEVSNIYDQMQRAD 310
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
++PD +Y+ LI+ + EE+ + +EE+ +G+R T++ + L++A++ G +E+A+
Sbjct: 311 LRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAR 370
Query: 118 QVI 120
V
Sbjct: 371 IVF 373
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++ + ++K A + +KG PT G YN+++ +E + ++ +M C++
Sbjct: 166 IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEM-CSE 224
Query: 61 IK--PDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEK 115
PD+ TYS LIS ++ V+ ++E+K +G++ T +I+T L+ Y G++E+
Sbjct: 225 GHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEE 284
Query: 116 AKQVILDPLIPMRSLNQIKSV-----LVSVLASHGQLFEAFLIYNEIKQVG 161
A ++ + MR + +V L+ L G++ +A+ +Y + + G
Sbjct: 285 ALNLVHE----MRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDG 331
>Medtr4g072990.2 | PPR containing plant-like protein | HC |
chr4:27612931-27601179 | 20130731
Length = 1057
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 9 KDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTY 68
+D EGA++++ LK + P +Y +++ C + + VF +M + ++P+ TY
Sbjct: 525 QDSEGAFQVIQLLKDARLDPDCKLYTTLISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTY 584
Query: 69 SHLISNSETEEDIVK---YYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVI----- 120
LI + K Y ++ ++A + +F ALI A A G + +A VI
Sbjct: 585 GALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGAMARAFDVIAEMEA 644
Query: 121 -LDPLIPMRSLNQIK-SVLVSVLASHGQLFEAFLIYNEIKQ 159
+ P++P + + L+ A GQ+ A +Y I+Q
Sbjct: 645 EIQPIVP----DHVTFGTLMKACAKAGQVERAREVYKMIQQ 681
>Medtr4g072990.1 | PPR containing plant-like protein | HC |
chr4:27612939-27601069 | 20130731
Length = 1134
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 9 KDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTY 68
+D EGA++++ LK + P +Y +++ C + + VF +M + ++P+ TY
Sbjct: 525 QDSEGAFQVIQLLKDARLDPDCKLYTTLISTCGKCGKVDLMFEVFHKMVNSGVEPNVHTY 584
Query: 69 SHLISNSETEEDIVK---YYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVI----- 120
LI + K Y ++ ++A + +F ALI A A G + +A VI
Sbjct: 585 GALIDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSGAMARAFDVIAEMEA 644
Query: 121 -LDPLIPMRSLNQIK-SVLVSVLASHGQLFEAFLIYNEIKQ 159
+ P++P + + L+ A GQ+ A +Y I+Q
Sbjct: 645 EIQPIVP----DHVTFGTLMKACAKAGQVERAREVYKMIQQ 681
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 10 DFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYS 69
+ + A+++L ++ +VP +N +M RER + + ++ ++M+ IKPD +Y+
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYN 536
Query: 70 HLISNSETE---EDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVI 120
LIS +D ++ ++E+ G T + ALI Y+ G+ + A++++
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590
>Medtr4g094688.1 | PPR containing plant protein | HC |
chr4:38731040-38725816 | 20130731
Length = 1086
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
MI K + A+K+ ++KG + P ++ +++ + + ++++ +M+
Sbjct: 293 MIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFASLVDSMGKAGRLDSAMKIYMEMRGYG 352
Query: 61 IKPDSQTYSHLISN---SETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+P Y LI + S E ++ ++E+K +G R ++T +I ++A G+L+ A
Sbjct: 353 YRPPPTIYVSLIESYVKSGKLETALRLWDEMKLAGFRPNFGLYTLIIESHAKSGKLDIAM 412
Query: 118 QVILD----PLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
D +P S + L+ + A+ GQ+ A +YN + G
Sbjct: 413 SAFSDMEKAGFLPTPS---TYACLLEMHAASGQIDHAMKLYNSMTNAG 457
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ F K+K + A + +++ ++P YN+++ + IS +++ ++M
Sbjct: 67 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 126
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
PD TYS L+ + + + +LK G++ +T LIN G+ E A+
Sbjct: 127 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 186
Query: 118 QVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+ D L+ ++N +V++ V ++G EA + +++++ G
Sbjct: 187 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 231
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ F K+K + A + +++ ++P YN+++ + IS +++ ++M
Sbjct: 202 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 261
Query: 61 IKPDSQTYSHLI----SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
PD TYS L+ N ++ I +LK G++ +T LIN G+ E A
Sbjct: 262 QPPDIITYSSLLDALCKNHHVDKAIA-LLTKLKDQGLQPNMYTYTILINGLCKGGRPEDA 320
Query: 117 KQVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+ + D L+ ++N +V++ V ++G EA + +++++ G
Sbjct: 321 QNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 366
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D++ K + GA ++ + +V T +I+A RE SD + +F++MQ
Sbjct: 337 LLDMYSKCGNLNGATEVFVKMGDTTIVSWT----SIIAAYVREGLYSDAIGLFDEMQSKG 392
Query: 61 IKPDSQTYSHLI------SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLE 114
++PD T + ++ S+ + D+ Y + +GM + + ALIN YA CG +E
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSY---VIKNGMGSNLPVTNALINMYAKCGSVE 449
Query: 115 KAKQVILDPLIPMRSL 130
+A+ V IP++ +
Sbjct: 450 EARLVF--SKIPVKDI 463
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNA-IMAECFRERNISDGVRVFEQMQCA 59
MID +MK D + A K+ D L N+V T + + EC+ E + F +MQ A
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEE-----ALECFREMQLA 217
Query: 60 DIKPDSQTYSHLISNSETEEDI---VKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
+ PD T +IS + + + + R ++ +LI+ YA CG +E A
Sbjct: 218 GVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELA 277
Query: 117 KQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDV 169
+QV + R+L S++V A +G +A + +K+ G LEP V
Sbjct: 278 RQVFDG--MSQRNLVSWNSIIVG-FAVNGLADKALSFFRSMKKEG--LEPNGV 325
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++ ++ K +FE A K+ D++ ++ +N +++ ++ + +R F M+
Sbjct: 147 LVGMYAKCNEFECAVKLFDEMPDKDV----ACWNTVISCYYQSGKFEEALRYFGMMRRFG 202
Query: 61 IKPDSQTYSHLISNSETEEDIVK---YYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+PDS T + IS+ D+ + ++EL +SG R + AL++ Y CGQLE A
Sbjct: 203 FEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAI 262
Query: 118 QVI 120
+V
Sbjct: 263 EVF 265
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVP--TTGMYNAIMAECFRERNISDGVRVFEQMQC 58
++DL+ K E A + ++P TT +N +++ E + D +R+F +M
Sbjct: 349 LMDLYFKCGKVESAETIF------KLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSK 402
Query: 59 ADIKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEK 115
+ ++PD+ T++ ++ S E + + + + + + AL++ YA CG +E+
Sbjct: 403 SFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEE 462
Query: 116 AKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQ 159
A V +P R L S +++ SHG+++EA ++ E+ Q
Sbjct: 463 AFGVF--KCLPERDLVSWTS-MITAYGSHGRVYEALELFAEMLQ 503
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++ ++ K +FE A K+ D++ ++ +N +++ ++ + +R F M+
Sbjct: 147 LVGMYAKCNEFECAVKLFDEMPDKDV----ACWNTVISCYYQSGKFEEALRYFGMMRRFG 202
Query: 61 IKPDSQTYSHLISNSETEEDIVK---YYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+PDS T + IS+ D+ + ++EL +SG R + AL++ Y CGQLE A
Sbjct: 203 FEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAI 262
Query: 118 QVI 120
+V
Sbjct: 263 EVF 265
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVP--TTGMYNAIMAECFRERNISDGVRVFEQMQC 58
++DL+ K E A + ++P TT +N +++ E + D +R+F +M
Sbjct: 349 LMDLYFKCGKVESAETIF------KLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSK 402
Query: 59 ADIKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEK 115
+ ++PD+ T++ ++ S E + + + + + + AL++ YA CG +E+
Sbjct: 403 SFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEE 462
Query: 116 AKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQ 159
A V +P R L S +++ SHG+++EA ++ E+ Q
Sbjct: 463 AFGVF--KCLPERDLVSWTS-MITAYGSHGRVYEALELFAEMLQ 503
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 24/181 (13%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I L+ + + E A + D++ ++ +N++++ C + SD + +F +M
Sbjct: 394 LISLYSRFDEIEAALSLFYDMREKPLIT----WNSMISGCVQAGKSSDAMELFSEMSMCG 449
Query: 61 IKPDSQTYSHLIS------NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLE 114
KPD+ T + L+S N E + Y + + +R I TALI+ Y+ CG+L+
Sbjct: 450 KKPDAITIASLLSGCCQLGNLRIGETLHSY---ILRNNVRVEDFIGTALIDMYSKCGRLD 506
Query: 115 KAKQV---ILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMS 171
A++V I DP + + ++S + +G AF Y+++++ G L+P +
Sbjct: 507 YAEKVFYNIKDPCLATW------NAIISGYSLYGLEHTAFGCYSKLQEQG--LKPDKITF 558
Query: 172 L 172
L
Sbjct: 559 L 559
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 51 RVFEQMQCADIKPDSQTYSHLISNSETEEDIVKYYEELKHSGMRA----TKQIFTALINA 106
RVF+QMQ A ++P+S + + +S + T ++ Y + MR + QI T++I+
Sbjct: 574 RVFQQMQGAGMRPNSISITSALS-ACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDM 632
Query: 107 YASCGQLEKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
YA CG L+ AK V + + + L + + ++S ASHG+ EA ++ E+ + G
Sbjct: 633 YAKCGNLDDAKFVFI--ICSTKEL-PVYNAMISAYASHGKSAEALALFQELVKQG 684
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 7 KMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFR----------ERNISDGVRVFEQM 56
K+ F+ A L+++K + P YN I+ R ER I D +VF++M
Sbjct: 212 KIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEM 271
Query: 57 QCADIKPDSQTYS---HLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQL 113
+ + I+PD ++S H+ S + + ++ +K G+ +T++I SCG++
Sbjct: 272 RESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRI 331
Query: 114 EKAKQVI 120
E+A+ +I
Sbjct: 332 EEAEDLI 338
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 7 KMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFR----------ERNISDGVRVFEQM 56
K+ F+ A L+++K + P YN I+ R ER I D +VF++M
Sbjct: 212 KIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEM 271
Query: 57 QCADIKPDSQTYS---HLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQL 113
+ + I+PD ++S H+ S + + ++ +K G+ +T++I SCG++
Sbjct: 272 RESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRI 331
Query: 114 EKAKQVI 120
E+A+ +I
Sbjct: 332 EEAEDLI 338
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I F + + A ++ D ++ +PT YNA++ + + +++ ++M A
Sbjct: 589 IIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAG 648
Query: 61 IKPDSQTYSHLISNSET---EEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ P+ TY+ L+ + E +Y+ LK+ G+ + AL+ A G+++ A
Sbjct: 649 VSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSAL 708
Query: 118 QVILD---PLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
V + IP + + ++L+ A G ++EA + ++++ G
Sbjct: 709 AVTKEMSSKKIPRNTF--VYNILIDGWARRGDVWEAADLMQQMRKEG 753
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 20/175 (11%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID F K + +GA +MLD++K + +VP +I+ C + N+ + ++F M+
Sbjct: 160 LIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS 219
Query: 61 IKPDSQTYSHLISNSETE----EDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
PD + +++ N + E+ + + +K+ G + +++LINA+ + +A
Sbjct: 220 YPPDMIS-CNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFFKARRYREA 278
Query: 117 --------KQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHT 163
KQ I+ ++ + ++++ L+ G++ EA + E+ Q+G T
Sbjct: 279 HAWYTKMFKQGIVPDVV-------LYAIMIRGLSKEGRVGEAAKMLEEMTQIGLT 326
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++ F K E A+++ D++K P +NA++ + ++VFE+++
Sbjct: 423 LLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECG 482
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
PD T++ L++ +++ + ++ ++E+K SG + F LI+AY+ CG ++A
Sbjct: 483 CSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAM 542
Query: 118 QV 119
V
Sbjct: 543 AV 544
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D+F K + + A ++L D++ PT YN++++ R + + R+ QM
Sbjct: 353 LLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKG 412
Query: 61 IKPDSQTYSHLISNSE---TEEDIVKYYEELKHSGMRATKQIFTALINAYASCG 111
IKPD TY+ L+S E +E + Y+E+K +G + F ALI + + G
Sbjct: 413 IKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRG 466
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 17 MLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLI---S 73
+ D +K +VP YN ++ C R + V VF+Q++ A PD TY+ L+ +
Sbjct: 299 IFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFA 358
Query: 74 NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPL-IPMRSLNQ 132
+ ++ ++ ++++ +G T + +LI+A+ G LE+A ++ + + ++
Sbjct: 359 KARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVF 418
Query: 133 IKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+ L+S G+ AF +Y+E+K G
Sbjct: 419 TYTTLLSGFEKAGKDEFAFEVYDEMKAAG 447
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++ F K E A+++ D++K P +NA++ + ++VFE+++
Sbjct: 423 LLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECG 482
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
PD T++ L++ +++ + ++ ++E+K SG + F LI+AY+ CG ++A
Sbjct: 483 CSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAM 542
Query: 118 QV 119
V
Sbjct: 543 AV 544
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D+F K + + A ++L D++ PT YN++++ R + + R+ QM
Sbjct: 353 LLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKG 412
Query: 61 IKPDSQTYSHLISNSE---TEEDIVKYYEELKHSGMRATKQIFTALINAYASCG 111
IKPD TY+ L+S E +E + Y+E+K +G + F ALI + + G
Sbjct: 413 IKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRG 466
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 17 MLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLI---S 73
+ D +K +VP YN ++ C R + V VF+Q++ A PD TY+ L+ +
Sbjct: 299 IFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFA 358
Query: 74 NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPL-IPMRSLNQ 132
+ ++ ++ ++++ +G T + +LI+A+ G LE+A ++ + + ++
Sbjct: 359 KARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVF 418
Query: 133 IKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+ L+S G+ AF +Y+E+K G
Sbjct: 419 TYTTLLSGFEKAGKDEFAFEVYDEMKAAG 447
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID F K + +GA +MLD++K + +VP +I+ C + N+ + ++F M+
Sbjct: 160 LIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS 219
Query: 61 IKPDSQTYSHLISNSETE----EDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
PD + +++ N + E+ + + +K+ G + + +LINA+ + +A
Sbjct: 220 YPPDMIS-CNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREA 278
Query: 117 ----KQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHT 163
++ + ++P L ++++ L+ G++ EA + E+ Q+G T
Sbjct: 279 HACYTKMFKEGIVPDVVL---YAIMIRGLSKEGRVGEAAKMLEEMTQIGLT 326
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID F K + +GA +MLD++K + +VP +I+ C + N+ + ++F M+
Sbjct: 160 LIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS 219
Query: 61 IKPDSQTYSHLISNSETE----EDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
PD + +++ N + E+ + + +K+ G + + +LINA+ + +A
Sbjct: 220 YPPDMIS-CNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREA 278
Query: 117 ----KQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHT 163
++ + ++P L ++++ L+ G++ EA + E+ Q+G T
Sbjct: 279 HACYTKMFKEGIVPDVVL---YAIMIRGLSKEGRVGEAAKMLEEMTQIGLT 326
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D++ K + GA ++ + +V + + +A RE SD + +F++MQ
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVS----WTSTIAAYVREGLYSDAIGLFDEMQSKG 667
Query: 61 IKPDSQTYSHLI------SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLE 114
++PD T + ++ S+ + D+ Y + +GM + + ALIN YA CG +E
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSY---VIKNGMGSNLPVTNALINMYAKCGSVE 724
Query: 115 KAKQVILDPLIPMRSL 130
+A+ V IP++ +
Sbjct: 725 EARLVFSK--IPVKDI 738
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+++ K + AYKML+D + P YN +M+E ++ NI + +F +M +
Sbjct: 380 IVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSG 439
Query: 61 IKPDSQTYSHLIS-----NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEK 115
I+PD +Y+ LI+ N E ++ ++EE G+ T + +T++I Y G L
Sbjct: 440 IQPDIHSYTTLIAVFCRENRMKESEM--FFEEAVRIGIIPTNRTYTSMICGYCREGNLTL 497
Query: 116 A 116
A
Sbjct: 498 A 498
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 14 AYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLIS 73
AYKML+D + P YN +M+E ++ NI + +F +M I+PD +Y+ LI+
Sbjct: 375 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 434
Query: 74 -----NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
N E ++ ++EE G+ T + +T++I Y G L A
Sbjct: 435 VFCRENRMKESEM--FFEEAVRIGIIPTNKTYTSMICGYCREGNLTLA 480
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I F K E +K+ ++ P + N+ M F+ + G +FE+++
Sbjct: 523 LIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG 582
Query: 61 IKPDSQTYS---HLISNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ PD ++YS H + + + K + E+K G+ + +I+ + G+++KA
Sbjct: 583 LVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642
Query: 118 QVILDPLIPMRSLNQIKSVLVSV---LASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIE 174
Q++ + + + L SV LA +L EA++++ E K +G L SLI+
Sbjct: 643 QLLEE--MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLID 700
Query: 175 HIRSDG 180
G
Sbjct: 701 GFGKVG 706
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 11 FEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSH 70
F+ A+K++ ++ G VP Y+ ++ + +FE+M+ I P TY+
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500
Query: 71 LISN---SETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQV-ILDPLIP 126
LI + + + K+++E+ H G +TALI+AY KAKQ+ + D L
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYL------KAKQMPVADELFE 554
Query: 127 MRSLNQIKSVLVSVLA------SHGQLFEAFLIYNEIK 158
M L K +V+ A GQ+ +A IY ++
Sbjct: 555 MMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ F K+K + A K+ ++ + P YN+++ + IS + + + M
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+PD TYS ++ + + + +LK G+R +T LI+ G+LE A+
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDAR 475
Query: 118 QVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIK 158
+ D L+ +L +V++ SHG EA + +++K
Sbjct: 476 NIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D K K Y + +++ P +N I++ + N++ + ++ ++ D
Sbjct: 837 LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD 896
Query: 61 IKPDSQTYSHLISN---SETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA- 116
P TY LI + E +K +EE+ G I+ LIN + G+++ A
Sbjct: 897 FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Query: 117 ---KQVILDPLIP-MRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDV 169
K+++ + + P ++S ++LV L G++ EA + E+K G L+P V
Sbjct: 957 ELFKKMVKEGIRPDLKSY----TILVECLCITGRIDEAVQYFEELKLTG--LDPDTV 1007
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID F K+K + A + ++ +++P YN+++ + IS +++ ++M
Sbjct: 370 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 429
Query: 61 IKPDSQTYSHLI----SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
+ PD TYS ++ N + ++ I +LK G+R +T LI+ G+LE A
Sbjct: 430 VPPDIITYSSILDALCKNHQVDKAIA-LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 488
Query: 117 KQVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIK 158
+ D L+ ++ +V++ + G EA + +++K
Sbjct: 489 HNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMK 531
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 24 MNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLISNSETEEDI-- 81
M P T +N +M ++ + +VF++M ++P +Y+ LI + D+
Sbjct: 176 MGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDK 235
Query: 82 -VKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPMRSLNQIK-SVLVS 139
++ E+++ G RA + L+ S G+ E+AK+++ D + SVL++
Sbjct: 236 AMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMN 295
Query: 140 VLASHGQLFEAFLIYNEIKQ 159
L G++ EA +++ E+++
Sbjct: 296 DLGKRGKIDEAMVLFREMRK 315
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 24 MNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLISNSETEEDI-- 81
M P T +N +M ++ + +VF++M ++P +Y+ LI + D+
Sbjct: 176 MGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDK 235
Query: 82 -VKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPMRSLNQIK-SVLVS 139
++ E+++ G RA + L+ S G+ E+AK+++ D + SVL++
Sbjct: 236 AMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMN 295
Query: 140 VLASHGQLFEAFLIYNEIKQ 159
L G++ EA +++ E+++
Sbjct: 296 DLGKRGKIDEAMVLFREMRK 315
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 24 MNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLISNSETEEDI-- 81
M P T +N +M ++ + +VF++M ++P +Y+ LI + D+
Sbjct: 176 MGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDK 235
Query: 82 -VKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPMRSLNQIK-SVLVS 139
++ E+++ G RA + L+ S G+ E+AK+++ D + SVL++
Sbjct: 236 AMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMN 295
Query: 140 VLASHGQLFEAFLIYNEIKQ 159
L G++ EA +++ E+++
Sbjct: 296 DLGKRGKIDEAMVLFREMRK 315
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 4 LFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKP 63
L K E K+L D+K P +N ++A C + +V +M+ +P
Sbjct: 457 LLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEP 516
Query: 64 DSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVI 120
D +T++ LIS +E D+ K Y E+ +G + AL+NA A G + A+ V+
Sbjct: 517 DKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVV 576
Query: 121 LD 122
LD
Sbjct: 577 LD 578
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID++ K + +YK+ P +NA+++ R + V++F++M +
Sbjct: 357 LIDMYAKCNEGNLSYKVFMKTSKKRTAP----WNAVLSGFVHNRLARNAVQLFKEMLLEN 412
Query: 61 IKPDSQTYSHLISNSETEEDI---VKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
++PDS T++ L+ D+ + + L G ++ + L++ Y+ CG L A
Sbjct: 413 VQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAH 472
Query: 118 QVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDV 169
Q+ +IP++ + I + ++ HG A ++N++ Q G +P +V
Sbjct: 473 QIF--DMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGE--KPNEV 521
>Medtr1g008360.1 | PPR containing plant-like protein | HC |
chr1:869072-866590 | 20130731
Length = 428
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I L K+K+ + + ++G+ + PT+ ++N++++ C +I +FE M+ ++
Sbjct: 108 LIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSE 167
Query: 61 -IKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
KPD TY++ I S S + ++ +Y K +G+ Q F ++I+ + E A
Sbjct: 168 NYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIA 227
Query: 117 KQVI 120
+V
Sbjct: 228 DRVF 231
>Medtr5g077220.1 | PPR containing plant-like protein | HC |
chr5:32962861-32959451 | 20130731
Length = 981
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVR-VFEQMQCA 59
MI + K ++ A + +++K + P YN+I+ + ++ D R + +MQ
Sbjct: 506 MIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSII-QMLSGADLVDQARDLTVEMQEM 564
Query: 60 DIKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
KP QT+S +I + D V Y+E+ +G++ + ++ ALIN +A G+L++A
Sbjct: 565 GFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALINGFAEHGRLDEA 624
Query: 117 KQVILDPLIPMRSLNQIKSVLVSVLASH---GQLFEAFLIYNEIKQVGHTLEPKDVMSLI 173
Q L+ L+ VL +++ S+ G L IY +++ + L+ S+I
Sbjct: 625 LQYF--HLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSSMI 682
Query: 174 EHIRSDGXXXXXXXXXXXSKGTDHWNDACCRIILY 208
G K T + I++Y
Sbjct: 683 TAFAELGLVSEAKLTFEKFKETGQADSTSYGIMMY 717
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
MI+ F K+K + A K+ ++ + P Y+A++ + IS +++ +QM
Sbjct: 343 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRG 402
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ P+ TY+ ++ + + + + K G++ + +T LI+ G+L+ A+
Sbjct: 403 VAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDAR 462
Query: 118 QVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+ D L+ ++ +V++ SHG L E+ + +++++ G
Sbjct: 463 NIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENG 507
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 14 AYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLIS 73
A+ + D+++ ++ + YN ++ R + + + V++F ++ ++P+ TY+ LI
Sbjct: 288 AFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIK 347
Query: 74 ---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVI 120
++E + V+ Y ELK +G+ T + LI Y+ G L A ++
Sbjct: 348 GYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLV 397
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVP-TTGMYNAIMAECFRERNISDGVRVFEQMQCA 59
++D +K + E A+ +LD+ K + VP ++ +N ++ + RN +V E+ +
Sbjct: 244 LLDALVKGQSIEIAHNVLDEFK--SSVPLSSPSFNILINGWCKVRNFEKARKVMEERKEH 301
Query: 60 DIKPDSQTYSHLISNSETEEDIVKY---YEELKHSGMRATKQIFTALINAYASCGQLEKA 116
+PD TY++ I + ++D K EE++ +G +T L+ Y GQL KA
Sbjct: 302 GFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKA 361
Query: 117 ----KQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+++ D ++P S L+ +L G+L +A +++++ + G
Sbjct: 362 LEEYERMKKDGIVPD---TPFYSSLMYILGKAGRLKDACEVFDDMPKQG 407
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
MI+ F K+K F+ A + ++ N++P Y++++ + IS +++ +QM
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ P +TY+ ++ + + +LK G++ ++ LI G+LE A+
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 118 QVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+V L+ +LN ++++ G EA + ++++ G
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D F + D A K+L+++ N P+ Y + + ++ R ++ ++V+ MQ
Sbjct: 504 LVDGFCREGDMVSAGKLLEEMGSNNFAPSAFCYCSQIKGFYKLRQFANALKVYSIMQKRG 563
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
I+PD+ +H++S + + EE + G+ + IN EKA
Sbjct: 564 IRPDTIACNHILSIYCRKREFNEALALSEEFRDHGVSLNPYSYNEFINKLCRESFPEKAL 623
Query: 118 QVILDPLIPMRSLNQI---KSVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLIE 174
Q++ P++ R++ S L+S A +A ++ + +VG T K +LI+
Sbjct: 624 QLL--PVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALID 681
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECF-RERNISDGVRVFEQMQCA 59
+ID+ K + A M + ++ + + P T Y ++M C + N++ R+F +M
Sbjct: 483 LIDIHAKAGYLDVAMSMYERMQQVGLSPDTFTY-SVMINCLGKSGNLAAADRLFGEMVDQ 541
Query: 60 DIKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
P+ TY+ +I+ + E +K Y +++++G R K ++ ++ CG LE+A
Sbjct: 542 GCVPNIVTYNIMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLGHCGYLEEA 601
Query: 117 KQVILDPLIPMRSLNQIK-----SVLVSVLASHGQLFEAFLIYNEIKQVG 161
+ V ++ M+ N + +LV + G + +A+ Y + G
Sbjct: 602 EAVFVE----MKQRNWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAG 647
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
MI+ F K+K + A + +++ ++P YN+++ + IS +++ ++M
Sbjct: 188 MINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRG 247
Query: 61 IKPDSQTYSHLI----SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
PD TYS L+ N + ++ I LK G+R +T LI+ G+LE A
Sbjct: 248 QPPDIITYSSLLDALCKNHQVDKAIA-LLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDA 306
Query: 117 KQVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIK 158
+ D L+ ++ +V++ + G EA + +++K
Sbjct: 307 HNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 349
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ K + + A ++L+ +KG+ + P MYN I+ +++ +SDG ++ +M
Sbjct: 165 LINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNK 224
Query: 61 IKPDSQTYSHLI---SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
I P+ TY+ LI S ++ V ++ + FT L++ G+++KA+
Sbjct: 225 IHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKAR 284
Query: 118 QVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGH 162
V+ IK + + ++ L + + + E+ + H
Sbjct: 285 HVLAV---------MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKH 320
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 14 AYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLIS 73
A K+ D + + +VP T +YN +M + R+I ++++M+ + PD T++ +
Sbjct: 376 ARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNIFVG 435
Query: 74 NS---ETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQVILDPLIPMRSL 130
+ED K +L G ++ ++ + G+L++A +++ D L +
Sbjct: 436 GHYKYGRQEDWTKLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTF 495
Query: 131 NQIK-SVLVSVLASHGQLFEAFLIYNEIKQVGHTLEPKDVMSLI 173
+ + L++ + G +AF IY+ + + G T SL+
Sbjct: 496 SVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLL 539
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
MI+ F K+K A + ++++ + P T YN+++ + IS ++ ++M
Sbjct: 344 MINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNG 403
Query: 61 IKPDSQTYSHLI----SNSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKA 116
PD TYS LI N+ ++ I +++K G++ + LI+ G+L+ A
Sbjct: 404 QPPDIFTYSSLIDALCKNNHLDKAIA-LVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNA 462
Query: 117 KQVILDPLIPMRSLN-QIKSVLVSVLASHGQLFE 149
+ V D L SLN + ++L++ L G LF+
Sbjct: 463 QDVFQDLLTKGYSLNIRTYNILINGLCKEG-LFD 495
>Medtr1g072300.2 | PPR containing plant protein | HC |
chr1:32088105-32090245 | 20130731
Length = 512
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
M+ L++ E K+ ++LK +N P +N ++ C E ++ RV Q++ A
Sbjct: 179 MMSLYISNGKLEKVPKLFEELK-VNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAK 237
Query: 61 IKPDSQTYSHL----ISNSETE---EDIVKYYEELKHSGMRATKQIFTALINAYASCGQL 113
+ PD TYS L I N+ + E +E++ R T+ +++L++ +A+ G +
Sbjct: 238 VDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNV 297
Query: 114 EKAKQV 119
++ ++
Sbjct: 298 DEVNRI 303
>Medtr1g072300.1 | PPR containing plant protein | HC |
chr1:32088105-32090245 | 20130731
Length = 512
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
M+ L++ E K+ ++LK +N P +N ++ C E ++ RV Q++ A
Sbjct: 179 MMSLYISNGKLEKVPKLFEELK-VNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAK 237
Query: 61 IKPDSQTYSHL----ISNSETE---EDIVKYYEELKHSGMRATKQIFTALINAYASCGQL 113
+ PD TYS L I N+ + E +E++ R T+ +++L++ +A+ G +
Sbjct: 238 VDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNV 297
Query: 114 EKAKQV 119
++ ++
Sbjct: 298 DEVNRI 303
>Medtr1g072300.3 | PPR containing plant protein | HC |
chr1:32088105-32090245 | 20130731
Length = 512
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
M+ L++ E K+ ++LK +N P +N ++ C E ++ RV Q++ A
Sbjct: 179 MMSLYISNGKLEKVPKLFEELK-VNTSPDVVTFNLLLTACASENDVETAERVLLQLKKAK 237
Query: 61 IKPDSQTYSHL----ISNSETE---EDIVKYYEELKHSGMRATKQIFTALINAYASCGQL 113
+ PD TYS L I N+ + E +E++ R T+ +++L++ +A+ G +
Sbjct: 238 VDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNV 297
Query: 114 EKAKQV 119
++ ++
Sbjct: 298 DEVNRI 303
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+++ F K +F A +L ++ G + P Y ++ + +N+S + + M+
Sbjct: 305 LVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRG 364
Query: 61 IKPDSQTYSHLISN---SETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
+ P+ +TY+ L+ + K E+ SG + + AL+N + G++E+A
Sbjct: 365 LSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAV 424
Query: 118 QVILDPLIPMRSLNQIK-SVLVSVLASHGQLFEAF 151
V+ D + + + S ++S+ +G+L +AF
Sbjct: 425 GVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAF 459
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+I+ F K+K + A ++L ++ ++P Y++++ + IS +++ ++M
Sbjct: 253 LINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Query: 61 IKPDSQTYSHLIS---NSETEEDIVKYYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
P+ TYS ++ + ++ + ++K+ G++ +T LI G+LE A+
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372
Query: 118 QVILDPLIPMRSLN-QIKSVLVSVLASHGQLFEAFLIYNEIKQVG 161
+V D L+ +LN +V++ G EA + ++++ G
Sbjct: 373 KVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
+ID + K + F A+ + + P + +N ++ +E + D + + + M D
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFD 570
Query: 61 IKPDSQTYSHLISNSETEEDIVK---YYEELKHSGMRATKQIFTALINAYASCGQLEKAK 117
KP TY+ LI E D + + +++ SG + +TA I AY G+L +A+
Sbjct: 571 AKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAE 630
Query: 118 QVIL---DPLIPMRSLNQIKSVLVSVLASHGQLFEAF 151
++++ + I + S I VLV+ GQL AF
Sbjct: 631 EMVVKIKEEGILLDSF--IYDVLVNAYGCIGQLDSAF 665
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D+++K + + A K+ + + P + +++ C + + QM+ A
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPS----PDDVAWTTVISGCVENGEEEQALFTYHQMRLAG 596
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELK--HSGMRATKQIF-----TALINAYASCGQL 113
++PD T++ L+ ++ E+ K H+ + F T+L++ YA CG +
Sbjct: 597 VQPDEYTFATLVKAC----SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNI 652
Query: 114 EKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHT 163
E A + + RS+ +++V LA HG EA +NE+K G T
Sbjct: 653 EDAYGLFRR--MNTRSVALWNAMIVG-LAQHGNAEEALNFFNEMKSRGVT 699
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D+++K + + A K+ + + P + +++ C + + QM+ A
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPS----PDDVAWTTVISGCVENGEEEQALFTYHQMRLAG 596
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELK--HSGMRATKQIF-----TALINAYASCGQL 113
++PD T++ L+ ++ E+ K H+ + F T+L++ YA CG +
Sbjct: 597 VQPDEYTFATLVKAC----SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNI 652
Query: 114 EKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHT 163
E A + + RS+ +++V LA HG EA +NE+K G T
Sbjct: 653 EDAYGLFRR--MNTRSVALWNAMIVG-LAQHGNAEEALNFFNEMKSRGVT 699
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 1 MIDLFMKMKDFEGAYKMLDDLKGMNMVPTTGMYNAIMAECFRERNISDGVRVFEQMQCAD 60
++D+++K + + A K+ + + P + +++ C + + QM+ A
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPS----PDDVAWTTVISGCVENGEEEQALFTYHQMRLAG 596
Query: 61 IKPDSQTYSHLISNSETEEDIVKYYEELK--HSGMRATKQIF-----TALINAYASCGQL 113
++PD T++ L+ ++ E+ K H+ + F T+L++ YA CG +
Sbjct: 597 VQPDEYTFATLVKAC----SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNI 652
Query: 114 EKAKQVILDPLIPMRSLNQIKSVLVSVLASHGQLFEAFLIYNEIKQVGHT 163
E A + + RS+ +++V LA HG EA +NE+K G T
Sbjct: 653 EDAYGLFRR--MNTRSVALWNAMIVG-LAQHGNAEEALNFFNEMKSRGVT 699
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 26 MVPTTGMYNAIMAECFRERNISDGVRVFEQMQCADIKPDSQTYSHLI----SNSETEEDI 81
++P YN ++ + + + + +F++M+ + KP+S T+S LI N + EE
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 82 VKYYEELKHSGMRATKQIFTALINAYASCGQLEKAKQV 119
EE++ G+ +++ALI+ + S G +E+ K++
Sbjct: 220 -GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256