Miyakogusa Predicted Gene

Lj3g3v1541350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1541350.1 Non Characterized Hit- tr|K4CX67|K4CX67_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,49.41,0.00000000000003,no description,NULL; P21-Rho-binding
domain,PAK-box/P21-Rho-binding; seg,NULL;
PBD,PAK-box/P21-Rho-b,gene.g47605.t1.1
         (141 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g011440.1 | P21-Rho-binding domain protein | HC | chr6:323...   141   2e-34
Medtr6g011440.2 | P21-Rho-binding domain protein | HC | chr6:323...   134   3e-32
Medtr1g105430.2 | P21-Rho-binding domain protein | HC | chr1:474...   114   3e-26
Medtr1g105430.1 | P21-Rho-binding domain protein | HC | chr1:474...   114   3e-26
Medtr1g105430.3 | P21-Rho-binding domain protein | HC | chr1:474...   104   3e-23
Medtr1g069650.1 | PAK-box/P21-Rho-binding family protein | HC | ...    78   3e-15
Medtr7g097180.1 | ROP-interactive CRIB motif protein | HC | chr7...    72   2e-13
Medtr1g041515.1 | P21-Rho-binding domain protein | HC | chr1:155...    62   2e-10
Medtr1g075690.1 | ROP-interactive CRIB motif protein B, putative...    47   5e-06

>Medtr6g011440.1 | P21-Rho-binding domain protein | HC |
           chr6:3239444-3235876 | 20130731
          Length = 157

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 82/96 (85%), Gaps = 1/96 (1%)

Query: 3   LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
           + VVKERE++IG+PTDVKHVAHIGWDGP G+GPSWMN FKTAPDFSTSIGSLS+++DPN 
Sbjct: 16  IFVVKEREIEIGHPTDVKHVAHIGWDGPNGNGPSWMNGFKTAPDFSTSIGSLSDQKDPNQ 75

Query: 63  STITSSRSVQDFGATSGSQPKPNLYQG-ISSAGVSH 97
            T+++S   QDF   +G+QPKP +YQG I SAGV+H
Sbjct: 76  LTVSTSGFNQDFEDPAGNQPKPVMYQGNIPSAGVTH 111


>Medtr6g011440.2 | P21-Rho-binding domain protein | HC |
           chr6:3239419-3235877 | 20130731
          Length = 151

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 79/96 (82%), Gaps = 7/96 (7%)

Query: 3   LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
           + VVKERE++IG+PTDVKHVAHIGWDGP G+GPSWMN FKTAPDFSTSIGSLS+++DPN 
Sbjct: 16  IFVVKEREIEIGHPTDVKHVAHIGWDGPNGNGPSWMNGFKTAPDFSTSIGSLSDQKDPNQ 75

Query: 63  STITSSRSVQDFGATSGSQPKPNLYQG-ISSAGVSH 97
            T+++S      G   G+QPKP +YQG I SAGV+H
Sbjct: 76  LTVSTS------GFNQGNQPKPVMYQGNIPSAGVTH 105


>Medtr1g105430.2 | P21-Rho-binding domain protein | HC |
           chr1:47444403-47441082 | 20130731
          Length = 153

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 80/140 (57%), Gaps = 7/140 (5%)

Query: 3   LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
           + VVKEREM+IGYPTDVKHVAH+GWDGP+G+GPSWM++FK  P+FSTSIG+L E RD + 
Sbjct: 18  MFVVKEREMEIGYPTDVKHVAHVGWDGPSGNGPSWMDDFKKVPEFSTSIGNLDEIRDSDP 77

Query: 63  STITSSRSVQDFGATSGSQPKPNLYQGISS-AGVSHVHXXXXXXXXXXXXXXXXXXXXXX 121
             +TS        ++  +Q   N+Y+GISS AG  H+                       
Sbjct: 78  MAVTS------LWSSIENQQSSNIYKGISSAAGDPHIAEKPKQKKVKSASSSRSPSSSSR 131

Query: 122 XXXXXXXXXXYCEREAAPIA 141
                     + EREA PIA
Sbjct: 132 RSRASKSKATFNEREAIPIA 151


>Medtr1g105430.1 | P21-Rho-binding domain protein | HC |
           chr1:47444403-47441082 | 20130731
          Length = 153

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 80/140 (57%), Gaps = 7/140 (5%)

Query: 3   LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
           + VVKEREM+IGYPTDVKHVAH+GWDGP+G+GPSWM++FK  P+FSTSIG+L E RD + 
Sbjct: 18  MFVVKEREMEIGYPTDVKHVAHVGWDGPSGNGPSWMDDFKKVPEFSTSIGNLDEIRDSDP 77

Query: 63  STITSSRSVQDFGATSGSQPKPNLYQGISS-AGVSHVHXXXXXXXXXXXXXXXXXXXXXX 121
             +TS        ++  +Q   N+Y+GISS AG  H+                       
Sbjct: 78  MAVTS------LWSSIENQQSSNIYKGISSAAGDPHIAEKPKQKKVKSASSSRSPSSSSR 131

Query: 122 XXXXXXXXXXYCEREAAPIA 141
                     + EREA PIA
Sbjct: 132 RSRASKSKATFNEREAIPIA 151


>Medtr1g105430.3 | P21-Rho-binding domain protein | HC |
          chr1:47444403-47441082 | 20130731
          Length = 137

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 56/65 (86%)

Query: 3  LAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPNA 62
          + VVKEREM+IGYPTDVKHVAH+GWDGP+G+GPSWM++FK  P+FSTSIG+L E RD + 
Sbjct: 18 MFVVKEREMEIGYPTDVKHVAHVGWDGPSGNGPSWMDDFKKVPEFSTSIGNLDEIRDSDP 77

Query: 63 STITS 67
            +TS
Sbjct: 78 MAVTS 82


>Medtr1g069650.1 | PAK-box/P21-Rho-binding family protein | HC |
          chr1:30318268-30319682 | 20130731
          Length = 236

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query: 1  MVLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFST 49
           +    KE+E+ IG PTDVKHVAHIGWDGP+ + PSWMNEFKT+P F++
Sbjct: 18 QIFENEKEQEIQIGVPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPGFAS 66


>Medtr7g097180.1 | ROP-interactive CRIB motif protein | HC |
          chr7:39088958-39087470 | 20130731
          Length = 309

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 38/50 (76%)

Query: 1  MVLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTS 50
           +    KE E++IG+PTDVKHVAHIG DGPT + P+WMNEFK+ P  S+S
Sbjct: 20 QIFDNEKEAEIEIGHPTDVKHVAHIGLDGPTENPPTWMNEFKSTPGLSSS 69


>Medtr1g041515.1 | P21-Rho-binding domain protein | HC |
          chr1:15587216-15588356 | 20130731
          Length = 206

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query: 7  KEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKT 43
          KE E+ IG+PTDVKHVAHIG D P+ + PSWMNE+K+
Sbjct: 21 KEDEIQIGFPTDVKHVAHIGSDDPSANAPSWMNEYKS 57


>Medtr1g075690.1 | ROP-interactive CRIB motif protein B, putative
          | HC | chr1:33536018-33537706 | 20130731
          Length = 214

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 22/29 (75%)

Query: 14 GYPTDVKHVAHIGWDGPTGSGPSWMNEFK 42
          G+PTDVKH+AHIG +    + PSWM EFK
Sbjct: 45 GFPTDVKHLAHIGCEDEKTNKPSWMTEFK 73