Miyakogusa Predicted Gene

Lj3g3v1531180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1531180.1 Non Characterized Hit- tr|K4BD36|K4BD36_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.41,1e-18,seg,NULL; LEA_2,Late embryogenesis abundant
protein, LEA-14,gene.g47590.t1.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g088610.1 | late embryogenesis abundant protein | LC | chr...   136   6e-33
Medtr2g088680.1 | late embryogenesis abundant hydroxyproline-ric...   106   4e-24
Medtr4g046803.1 | late embryogenesis abundant protein | LC | chr...    88   2e-18
Medtr4g046830.1 | late embryogenesis abundant hydroxyproline-ric...    84   3e-17
Medtr4g046787.1 | late embryogenesis abundant hydroxyproline-ric...    81   2e-16
Medtr5g005950.1 | late embryogenesis abundant protein | LC | chr...    80   7e-16
Medtr8g005060.1 | late embryogenesis abundant protein | HC | chr...    75   1e-14
Medtr7g074250.1 | late embryogenesis abundant protein | HC | chr...    56   8e-09
Medtr5g009910.1 | late embryogenesis abundant protein | LC | chr...    47   4e-06
Medtr8g028475.1 | late embryogenesis abundant protein | HC | chr...    46   8e-06

>Medtr2g088610.1 | late embryogenesis abundant protein | LC |
           chr2:37362127-37361558 | 20130731
          Length = 189

 Score =  136 bits (342), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 85/130 (65%), Gaps = 2/130 (1%)

Query: 1   MNVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFM 60
           MN+TL  +ITIVNPNY  F Y NS +Y+NY +TIVG VPI +  VPAR  +NVTT A  M
Sbjct: 55  MNMTLGMVITIVNPNYAGFKYQNSISYINYHDTIVGNVPIESQLVPARSEINVTTSADLM 114

Query: 61  VGKLIQDPKFWSDVVSGSL--NLTSTAELPGKASILKFIKLKATAYXXXXXXXXXXXMHA 118
           VGKL+Q+P+FW D+V   +  N TST ELPGKA +LK+IKLKA  Y             A
Sbjct: 115 VGKLLQNPQFWKDMVHNRMIINFTSTTELPGKAILLKYIKLKAITYCSCDISVNITSNGA 174

Query: 119 VTKCIDKIKL 128
            + C  +IKL
Sbjct: 175 DSNCKSRIKL 184


>Medtr2g088680.1 | late embryogenesis abundant hydroxyproline-rich
           glycoprotein | LC | chr2:37395271-37394711 | 20130731
          Length = 186

 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 3/105 (2%)

Query: 1   MNVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFM 60
           MN++  TL+TI NPN+GSF +  S +YV Y +T+VG VPI +  VPA   +NV+T  +  
Sbjct: 57  MNIS--TLVTIGNPNFGSFEFKKSYSYVTYHDTVVGTVPIESQLVPAHSEINVSTYTLMT 114

Query: 61  VGKLIQDPKFWSDVVSG-SLNLTSTAELPGKASILKFIKLKATAY 104
           V KLI +P FW +VV G    L S AE PGK  +LK+IKLK TAY
Sbjct: 115 VNKLINNPDFWKEVVPGYKFTLISKAEFPGKVIVLKYIKLKGTAY 159


>Medtr4g046803.1 | late embryogenesis abundant protein | LC |
           chr4:16644485-16645039 | 20130731
          Length = 184

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 69/126 (54%)

Query: 3   VTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFMVG 62
           V L  +ITI NPNYG++   N+T Y+++ +T+V   PIG   +P+  T NVT  A  M  
Sbjct: 59  VPLHLVITIFNPNYGTYKTKNTTGYLSFQDTLVAIAPIGPNKLPSHRTTNVTATAGLMNE 118

Query: 63  KLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIKLKATAYXXXXXXXXXXXMHAVTKC 122
           KLI + KF  DV  GS NLT+ A L GK  I K  K+KAT              +  + C
Sbjct: 119 KLISNDKFLVDVAHGSFNLTAKATLRGKVHISKVFKVKATVTINCDIFFNITSFYTDSYC 178

Query: 123 IDKIKL 128
           I KIK+
Sbjct: 179 ITKIKV 184


>Medtr4g046830.1 | late embryogenesis abundant hydroxyproline-rich
           glycoprotein | HC | chr4:16686688-16687242 | 20130731
          Length = 184

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 68/126 (53%)

Query: 3   VTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFMVG 62
           V L  +I+++NPNYG +   N+T +V+Y  T+V  VP+ A  +P   T NV+  A  M  
Sbjct: 58  VNLTMIISVMNPNYGIYKTENTTGFVSYQKTVVAMVPVDAQTLPGHATTNVSVTAGLMSH 117

Query: 63  KLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIKLKATAYXXXXXXXXXXXMHAVTKC 122
           KL+ +  F +DV  GS N+T+     GK  +LK IK+KA              M AV+ C
Sbjct: 118 KLMTNENFVADVGDGSFNMTTRTTFHGKVHLLKIIKIKALVNMYCDILFKMDPMDAVSSC 177

Query: 123 IDKIKL 128
           +  +++
Sbjct: 178 VTHMRV 183


>Medtr4g046787.1 | late embryogenesis abundant hydroxyproline-rich
           glycoprotein | HC | chr4:16619476-16620137 | 20130731
          Length = 184

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 66/127 (51%)

Query: 2   NVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFMV 61
           +V L  ++TI NPNYG++   N+T Y+NY +T+V   PIG   +P   T NV+  A  M 
Sbjct: 58  SVPLHMVVTIFNPNYGTYKTKNTTGYLNYQDTLVAIAPIGPKKLPGHRTTNVSATAGLMS 117

Query: 62  GKLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIKLKATAYXXXXXXXXXXXMHAVTK 121
            +LI + KF  DV  GS N T+ A   GK  + K  K+KA              +   + 
Sbjct: 118 VELISNDKFLVDVADGSFNFTAKAIFHGKVHMSKVFKVKAMVNISCDIFFNITSLGTDSY 177

Query: 122 CIDKIKL 128
           CI KIK+
Sbjct: 178 CITKIKV 184


>Medtr5g005950.1 | late embryogenesis abundant protein | LC |
           chr5:688709-688137 | 20130731
          Length = 190

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 1/128 (0%)

Query: 1   MNVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFM 60
           +N++L  L+T+ NPN+GSF Y NS+AY+NY   ++   P+    +PA  + N++T  + +
Sbjct: 64  LNLSLAILVTVDNPNHGSFTYQNSSAYLNYRGNLLATAPLHEDTIPALKSHNIST-ILNV 122

Query: 61  VGKLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIKLKATAYXXXXXXXXXXXMHAVT 120
              + + P    D + G +N TST  L GK  I  FIK+KAT Y             A +
Sbjct: 123 YVDVTEVPDLLGDYLGGVINFTSTTTLVGKVKIFNFIKIKATTYSTCDIFVYIHGQIANS 182

Query: 121 KCIDKIKL 128
            C +KIK 
Sbjct: 183 TCDNKIKF 190


>Medtr8g005060.1 | late embryogenesis abundant protein | HC |
           chr8:28227-29465 | 20130731
          Length = 192

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%)

Query: 1   MNVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFM 60
           +NVTLD  +++ NPN   F Y N+TA++NY   ++GEVPI A  + +  T        FM
Sbjct: 64  LNVTLDVDVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLTLTFM 123

Query: 61  VGKLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIKL 99
             +L+ + + +SD+ SG+L L +   + GK +IL FIK+
Sbjct: 124 ADRLLSNSQLFSDITSGTLPLNTFLTIFGKVNILGFIKV 162


>Medtr7g074250.1 | late embryogenesis abundant protein | HC |
           chr7:27752015-27750890 | 20130731
          Length = 211

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 1   MNVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFM 60
           +NVTL+  I + N N+ SF + + T+ + Y    VG+  I A  +PA+G+  +       
Sbjct: 82  LNVTLNLKIQVDNQNHASFKHADGTSLLMYKGVEVGDTDIYAGLIPAKGSTILPCRLTLQ 141

Query: 61  VGKLIQD-PKFWSDVVSGSLNLTSTAELPGKASILKFIK 98
             KL  +      D++ G L+L +   +PG+ + L FIK
Sbjct: 142 ADKLASNVTGLLGDLMGGQLSLEAVTRIPGRVTFLGFIK 180


>Medtr5g009910.1 | late embryogenesis abundant protein | LC |
           chr5:2528190-2527621 | 20130731
          Length = 189

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 1   MNVTLDTLITIVNPNYGS-FNYINSTAYVNYDNTIVGEVPIGAAFVPARGT--VNVTTGA 57
            N T+ T  +I NPNYG  F+Y  S   V Y    VG   I    V  R T  +NVT   
Sbjct: 64  FNATIITYFSIWNPNYGGIFSYEYSNIKVLYSGVKVGVTKIPNDKVSQRKTKHINVTVDV 123

Query: 58  IFMVGKLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIKLKAT 102
            F+   +  + KF SD+ SG LNLTS  +  G   ++K    + T
Sbjct: 124 NFLKLIVNGNEKFSSDIGSGMLNLTSYVKFSGIVQLMKIFHKRKT 168


>Medtr8g028475.1 | late embryogenesis abundant protein | HC |
           chr8:10813944-10812975 | 20130731
          Length = 219

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 1   MNVTLDTLITIVNPNYGSFNYINSTAYVNYDNTIVGEVPIGAAFVPARGTVNVTTGAIFM 60
           +N+T+   ++I N N  S    NST  V Y    V +  I    V A+ T  +      M
Sbjct: 92  INMTMVVNMSIKNDNIASIKLGNSTTTVYYRGITVADAVIPPGLVKAKKTTRLNVTIEVM 151

Query: 61  VGKLIQDPKFWSDVVSGSLNLTSTAELPGKASILKFIK 98
             +L+  P    DVV G + + + + +PG+  IL FIK
Sbjct: 152 ADRLVSSPNLLGDVVQGEMVMNTYSIIPGRVKIL-FIK 188