Miyakogusa Predicted Gene

Lj3g3v1531170.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1531170.2 Non Characterized Hit- tr|D7T0B0|D7T0B0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,74.58,0,"Winged
helix" DNA-binding domain,NULL; DDRGK,DDRGK domain containing protein;
seg,NULL; coiled-coil,CUFF.42775.2
         (298 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g083200.1 | DDRGK domain protein | HC | chr2:34926248-3493...   281   6e-76

>Medtr2g083200.1 | DDRGK domain protein | HC |
           chr2:34926248-34932978 | 20130731
          Length = 296

 Score =  281 bits (718), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 138/176 (78%), Positives = 144/176 (81%)

Query: 123 SKQDRYAEMRRLKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDKWKGEFSVDDEGTLED 182
           SKQDRY+EMRRLKD                            FDKWKGEFSVDDEGTLE+
Sbjct: 121 SKQDRYSEMRRLKDEEREAQERKLEEEAKAQKAREEEAAALEFDKWKGEFSVDDEGTLEE 180

Query: 183 VQEKTEDLLSNFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGK 242
            Q+KTEDLL+NFVEYIKK KCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGK
Sbjct: 181 EQDKTEDLLTNFVEYIKKQKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGK 240

Query: 243 FIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKVEYTEDISNVEEITVS 298
           FIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPK  YTEDISN+EEITV+
Sbjct: 241 FIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKTHYTEDISNMEEITVN 296