Miyakogusa Predicted Gene

Lj3g3v1476940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1476940.1 Non Characterized Hit- tr|B9T439|B9T439_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,29.49,2e-17,seg,NULL,CUFF.42675.1
         (300 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g101290.1 | hypothetical protein | HC | chr8:42515920-4251...   322   3e-88
Medtr7g100328.1 | TPR superfamily protein | HC | chr7:40271017-4...    57   2e-08

>Medtr8g101290.1 | hypothetical protein | HC |
           chr8:42515920-42519028 | 20130731
          Length = 294

 Score =  322 bits (825), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/301 (55%), Positives = 201/301 (66%), Gaps = 8/301 (2%)

Query: 1   MEALSSLHHSHQPQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEAL+SLHH HQP C                                             
Sbjct: 1   MEALASLHHRHQPLCSSLHPSLSSTTASSLFLSQPSPSTSPSSSIRALSSPSPPSSES-- 58

Query: 61  XXXVQNLQYPEPKTPQIFNPLPKLPSFDPPIQYPEAKSSHIFNTLRKLPSFATIT-AASA 119
              +QNLQYPE K PQ FNPL K+P+FDPP Q PE KS   FN + K PSF T+T AASA
Sbjct: 59  ---LQNLQYPETKIPQFFNPLVKVPNFDPPRQNPEPKSPQFFNPISKFPSFVTVTVAASA 115

Query: 120 FLILGFCQKGFTSKALPSSLSSVVSIQEELLDEKTDIGDFLGSKPDHGHSVLLLKLKERV 179
           FL LG CQ GF      +SLSSVVS++E+ LDEK+DI +FLG+KPDH  SVL LK+KER+
Sbjct: 116 FLFLGCCQNGFNKPI--TSLSSVVSVEEKALDEKSDIEEFLGNKPDHIESVLYLKMKERI 173

Query: 180 PVVHSFDKMKSDDEEAWQVLKAQVFSCSEKLELVKVGFEEILENDQDCHRAHHDCIFEYL 239
            VVHSF K+K+DD+EAW+VL+A+V SCSE LEL+KVGFEEILE D DC+++H   + EYL
Sbjct: 174 RVVHSFKKIKTDDDEAWEVLRAEVVSCSENLELIKVGFEEILEKDMDCNKSHQGRVLEYL 233

Query: 240 EMVDKCTNLLKGIKVAISRCERQNADIRSYLRFFSKVLARIRVFERDMVGALKYYKELVQ 299
           EMVD+C  LLKGIKVA+ RCER++ADI  YLR F KV+ RIRV E DMVGALKY+K+L Q
Sbjct: 234 EMVDECNGLLKGIKVAMDRCEREDADINRYLRLFGKVVDRIRVLEGDMVGALKYFKQLEQ 293

Query: 300 E 300
           E
Sbjct: 294 E 294


>Medtr7g100328.1 | TPR superfamily protein | HC |
           chr7:40271017-40272356 | 20130731
          Length = 351

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 24/203 (11%)

Query: 114 ITAASAFLILGFCQKGFTSKAL--PSSLSSVVSIQEELLDEKTDIGDFLGSKPDHGHSVL 171
           + AA+AF  + F      +  L  P++++   +++E   D +  I + L   P+   ++ 
Sbjct: 89  VIAATAFFFMRFHHTPVIAATLSPPTTVTENATMEE---DAEKVIQEKLTENPNDAEALR 145

Query: 172 LL---KLKER-----VPVVHSFDKMKSDDEEAWQVLKAQVFSCSEKLELVKVGFEEILEN 223
            L   K+K R     + V+    +++ ++ E W++LKA ++  ++  E  K  FEEIL+ 
Sbjct: 146 ALMEVKIKAREIDEAIGVIDRLIEIEPEEME-WRLLKANMYIYNDDHESAKKLFEEILKK 204

Query: 224 DQDCHRAHHDCIFEYLEMVDKCTNLLKG----IKVAISRCERQN--ADIRSYLRFFSKVL 277
           D     A H  +    E  ++    LKG    ++ A+  C++Q   +D+R     F  ++
Sbjct: 205 DPLRVEAFHGLVMASSESNEQSDEPLKGLLKRVEKAMELCKKQKKVSDVRD----FRLLV 260

Query: 278 ARIRVFERDMVGALKYYKELVQE 300
           A+I+V E +   ALK Y++LV+E
Sbjct: 261 AQIKVMEGNFSEALKAYQDLVKE 283