Miyakogusa Predicted Gene

Lj3g3v1476900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1476900.1 Non Characterized Hit- tr|I1QVY3|I1QVY3_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,64.52,4e-19,
,CUFF.42669.1
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g104850.1 | O-fucosyltransferase family protein | HC | chr...   117   2e-27

>Medtr8g104850.1 | O-fucosyltransferase family protein | HC |
           chr8:44167811-44170712 | 20130731
          Length = 486

 Score =  117 bits (294), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/62 (83%), Positives = 56/62 (90%)

Query: 1   MWYAPHSEFSNQLSEFKNAVLLAGILNSTLVVPPILDHHAVALGSCPKVQVVDPKEIRIS 60
           MWYAPHS FSNQLSEFK+AVL+AGILN TLVVPPILDHHAVALGSCPK +VV+P  IR S
Sbjct: 64  MWYAPHSGFSNQLSEFKHAVLIAGILNRTLVVPPILDHHAVALGSCPKFRVVEPNHIRFS 123

Query: 61  VW 62
           VW
Sbjct: 124 VW 125