Miyakogusa Predicted Gene

Lj3g3v1475860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1475860.1 Non Characterized Hit- tr|I1J7S5|I1J7S5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.59,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; YABBY,YABBY
protein,CUFF.42665.1
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g025900.1 | plant-specific transcription factor YABBY fami...   349   1e-96
Medtr4g101660.1 | plant-specific transcription factor YABBY fami...   259   2e-69
Medtr4g114730.1 | plant-specific transcription factor YABBY fami...   165   3e-41
Medtr2g087740.1 | plant-specific transcription factor YABBY fami...   164   9e-41
Medtr4g050300.1 | plant-specific transcription factor YABBY fami...   150   6e-37
Medtr5g034030.1 | YABBY transcription factor | HC | chr5:1470182...   133   1e-31
Medtr5g046230.1 | YABBY-like transcription factor CRABS CLAW-lik...   113   2e-25

>Medtr4g025900.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:8885604-8888552 | 20130731
          Length = 221

 Score =  349 bits (895), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 165/196 (84%), Positives = 174/196 (88%), Gaps = 1/196 (0%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHC+NLLSVNMR  LLPA NQLHL H++F P
Sbjct: 26  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHTYFNP 85

Query: 87  QNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGH-EEIXXXXXXXXXXEKRQRVPSAYN 145
           Q ++EEIRN PSTNMMMNQLPN NDL+M+TMRGGH EEI          EKRQRVPSAYN
Sbjct: 86  QTLMEEIRNAPSTNMMMNQLPNPNDLMMNTMRGGHHEEIPKPPPANRPPEKRQRVPSAYN 145

Query: 146 RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANARQDAEDVL 205
           RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKAN RQD+EDVL
Sbjct: 146 RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQDSEDVL 205

Query: 206 LKDGFFAPANVGVSPY 221
           +KDGFF  ANVGVSPY
Sbjct: 206 MKDGFFTQANVGVSPY 221


>Medtr4g101660.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:42026521-42023461 | 20130731
          Length = 218

 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 153/200 (76%), Gaps = 7/200 (3%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CYVHC  CDT+LAVSVPCTSLFKTVTVRCGHC+NLL VNMR  LLP+ NQ HL HSFF+P
Sbjct: 21  CYVHCTICDTILAVSVPCTSLFKTVTVRCGHCTNLLPVNMRALLLPSPNQFHLGHSFFSP 80

Query: 87  --QNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVPSAY 144
              N+LEE+ N P+ N MMN +   ND  M   R   +E+          EKRQRVPSAY
Sbjct: 81  THHNLLEEMPN-PAPNFMMNHINAPNDFSMPPTRTVADELPRPPIINRPPEKRQRVPSAY 139

Query: 145 NRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANA-RQDAED 203
           NRFIKDEIQRIK+ NPDI+HREAFSAAAKNWAHFPHIHFGLMPD Q +KK N  +Q+ +D
Sbjct: 140 NRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPD-QTMKKTNVCQQEGDD 198

Query: 204 -VLLKD-GFFAPANVGVSPY 221
            +L+KD GF+A AN+GVSPY
Sbjct: 199 QILMKDGGFYASANLGVSPY 218


>Medtr4g114730.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:47236664-47232867 | 20130731
          Length = 191

 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 89/161 (55%), Positives = 101/161 (62%), Gaps = 13/161 (8%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CY+ CNFC+ VLAVSVPC+SLF  VTVRCGHC+NL SVNM      AA Q         P
Sbjct: 17  CYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNM-----AAAFQSLSWQDVQAP 71

Query: 87  QNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGG-HEEIXXXXXXXXXXEKRQRVPSAYN 145
            + +      P   +  +  P  ND +   MR      +          EKRQRVPSAYN
Sbjct: 72  SHCM-----NPEYRIRTSSTPKCNDRI--AMRSAPTTHVTEERVVNRPPEKRQRVPSAYN 124

Query: 146 RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 186
           +FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 125 QFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 165


>Medtr2g087740.1 | plant-specific transcription factor YABBY family
           protein | HC | chr2:36921389-36915323 | 20130731
          Length = 195

 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/177 (53%), Positives = 109/177 (61%), Gaps = 33/177 (18%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CYVHCNFC+T LAVSVPC+SL   VTVRCGHC+NLLSVNM    L +          FTP
Sbjct: 15  CYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGATSLQS----------FTP 64

Query: 87  QNILEEIRNGPSTNMMMN--QLPNQNDLVMSTMRGG-------------HEEIXXXXXXX 131
           Q      ++ P    ++N  Q  ++ ++V S+                 HE+        
Sbjct: 65  Q------QDHPQKQQLINCHQEASRKEVVGSSSSSSSSSSKCKAFQPLVHEQ--PRTPPI 116

Query: 132 XXXEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD 188
              EKRQRVPSAYNRFIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHFGL  D
Sbjct: 117 RPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLD 173


>Medtr4g050300.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:17796569-17804302 | 20130731
          Length = 179

 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/158 (55%), Positives = 105/158 (66%), Gaps = 10/158 (6%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CYVHCNFC+T+LAV+VP +SL   VTVRCGHC+NLLSVNM  PLL       L       
Sbjct: 12  CYVHCNFCNTILAVNVPYSSLLTIVTVRCGHCANLLSVNMVAPLLQPFPPPQLPQP--QK 69

Query: 87  QNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVPSAYNR 146
           Q+I++E     +++  +    ++ + + S     H  I          EKR RVPSAYNR
Sbjct: 70  QHIIDE----EASSKEIGSSSSKCNKIASFEAVEHPRIPPIRPI----EKRHRVPSAYNR 121

Query: 147 FIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFG 184
           FIK+EIQRIKA NPDISHREAFS+AAKNWAHFPHIHFG
Sbjct: 122 FIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG 159


>Medtr5g034030.1 | YABBY transcription factor | HC |
           chr5:14701820-14703695 | 20130731
          Length = 217

 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 94/159 (59%), Gaps = 17/159 (10%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGP------LLPAANQLHLA 80
           CYV C FC+T+L VSVPC+SL   VTVRCGHC++LLSVNM         LL +   L   
Sbjct: 15  CYVQCGFCNTILMVSVPCSSLTMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHLEQK 74

Query: 81  HSFFTPQNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRV 140
            S    ++  + + +  S +MM      ++D+           I          EKRQR 
Sbjct: 75  ESSSPDEDANKTLNSNTSASMMTYSDCEEDDV-----------IPISNVVNKPPEKRQRT 123

Query: 141 PSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFP 179
           PSAYNRFIK+EI+R+KA NPD++H+EAFS AAKNWA+ P
Sbjct: 124 PSAYNRFIKEEIKRLKAKNPDMAHKEAFSTAAKNWANCP 162


>Medtr5g046230.1 | YABBY-like transcription factor CRABS CLAW-like
           protein | HC | chr5:20267886-20271029 | 20130731
          Length = 216

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 86/157 (54%), Gaps = 26/157 (16%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CYV CNFC+TVLAV +PC  L  TVTV+CGHCSNL  +  R    P++    + H+  + 
Sbjct: 20  CYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLTTRP---PSSKNQTVDHTL-SL 75

Query: 87  QNILEEIRNGPSTNMMMNQL-----PNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVP 141
           Q I    +  PS++           P     V+                    EK+ R+P
Sbjct: 76  QGIYSSKKGQPSSSSSPTTSTESLSPRPPPFVVKP-----------------PEKKHRLP 118

Query: 142 SAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHF 178
           SAYNRF+K+EIQRIK  NP I HREAFSAAAKNWA +
Sbjct: 119 SAYNRFMKEEIQRIKVANPQIPHREAFSAAAKNWARY 155