Miyakogusa Predicted Gene

Lj3g3v1461480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1461480.1 tr|A9SXN2|A9SXN2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85367
,36.54,0.000000000000002,EF-hand,NULL; EF_HAND_2,EF-HAND 2;
UIM,Ubiquitin interacting motif; no description,EF-hand-like
doma,CUFF.42646.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g026500.1 | EF-hand pair protein | HC | chr4:9119955-91251...   231   6e-61

>Medtr4g026500.1 | EF-hand pair protein | HC | chr4:9119955-9125168
           | 20130731
          Length = 292

 Score =  231 bits (589), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/259 (53%), Positives = 157/259 (60%), Gaps = 4/259 (1%)

Query: 36  IMSEYEQQRLHRIAENRARLEALGLPQMASSLKG---LPRTRSKTKGKEKVADDDKEYQX 92
           +MSEYE+QRL RIAEN+ARL+A+GLPQM SSLK    + +   K KGKEKV DDD +   
Sbjct: 35  MMSEYEKQRLERIAENKARLKAMGLPQMVSSLKTSTPIKKNMKKKKGKEKVEDDDDDEYI 94

Query: 93  XXXXXXXXXXXXXXXXXXXXXXFAPQNASGSRKRKVMNKSLXXXXXXXXXXXXXXXECIX 152
                                    +NASGSRKRKV NKSL               E + 
Sbjct: 95  PQNEEEQERDESDSSSEQHEHDSDFENASGSRKRKVKNKSLKVKSRVTGKKHGGTSENVD 154

Query: 153 XXXXXALRQAIALSLQDSAEXXXXXXXXXXXXXXXXXXENLHIQEDXXXXXXXXSFTSRL 212
                AL QAIALSLQDSAE                   ++ IQED        SF SRL
Sbjct: 155 EEEE-ALMQAIALSLQDSAEASFCSNKTIGNISKAEKKGSIQIQEDKGRKKNKKSFASRL 213

Query: 213 QMTEDELIVHFFQLDEAGKGCLGIRDIERAATAHDFMWSDKELADMIRCFDSDGDRKLSL 272
           QMTEDELIVHFFQLDEAGKG + IRD+E+AA  HDF W+DKEL DMIRCFDSDGD +LSL
Sbjct: 214 QMTEDELIVHFFQLDEAGKGTVTIRDLEKAAITHDFSWTDKELVDMIRCFDSDGDGRLSL 273

Query: 273 DDFRKIAVRCNMIKGPENS 291
           DDFRKI VRCN+IKGPENS
Sbjct: 274 DDFRKIVVRCNLIKGPENS 292