Miyakogusa Predicted Gene

Lj3g3v1440310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1440310.1 tr|A9SR16|A9SR16_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_166233,29.63,0.0000002,seg,NULL,81815_g.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g027425.1 | nucleotidyltransferase family protein | HC | c...   174   4e-44

>Medtr4g027425.1 | nucleotidyltransferase family protein | HC |
           chr4:9491496-9506334 | 20130731
          Length = 1573

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 109/150 (72%), Gaps = 8/150 (5%)

Query: 1   MAHRQLMDSLTSHISLYHSQSXXXXXXXXXXXXXRTSILKWFSSLSLHQRLAHLTIVDSS 60
           MAHRQL+DSLTSHISLYHS S             R+SILKWFSSLS+H RL++LTI+D +
Sbjct: 1   MAHRQLIDSLTSHISLYHSHSPNPNPNPNP----RSSILKWFSSLSIHHRLSYLTILDHN 56

Query: 61  FVQILLQMIANLRGNGHGCFILLPDLPSRDPPFLPTLCFKKSRGLLSRVADSDAAARWIF 120
           F+ ILLQM+  L+ N H  FILL DLPSRDPPFLPTLCFKKS GLLSR+AD D A ++I 
Sbjct: 57  FILILLQMLNKLQSNRHTSFILLADLPSRDPPFLPTLCFKKSHGLLSRIADKDTACQFIS 116

Query: 121 ESARLFESREGEEVAA----CLCSPRRLDA 146
           ES RLF+SREGE  ++      CS + LD 
Sbjct: 117 ESVRLFDSREGENSSSSPSHATCSMKCLDG 146