Miyakogusa Predicted Gene

Lj3g3v1440200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1440200.1 Non Characterized Hit- tr|B9RD63|B9RD63_RICCO
Nucleotidyltransferase, putative OS=Ricinus communis
G,56.79,2e-16,seg,NULL,NODE_92659_length_1493_cov_9.399866.path2.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g027425.1 | nucleotidyltransferase family protein | HC | c...   313   1e-85

>Medtr4g027425.1 | nucleotidyltransferase family protein | HC |
           chr4:9491496-9506334 | 20130731
          Length = 1573

 Score =  313 bits (803), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 166/291 (57%), Positives = 202/291 (69%), Gaps = 5/291 (1%)

Query: 1   MRLAWLNSSGGRKRGVKLKEKLNAAGISANVYWRKKGCVDWWANLDAVTSKKVFTTIIMK 60
           MRL W+NS GG++RGVKLKEK+N AG++ANVYWRKKGCVDWW NLD+V  KKVF TI+MK
Sbjct: 241 MRLGWMNSCGGKRRGVKLKEKMNLAGVAANVYWRKKGCVDWWRNLDSVMRKKVFDTILMK 300

Query: 61  AAKSLTSEVLEVAGSASKDEIWLHS--TGAEKLLDYYRPASAQRTIPTFPDDTELGTVIT 118
           +AK+LT EVL++A SASKD +WL++   G +KLLDY   AS+QRTI  F DDTE G +IT
Sbjct: 301 SAKALTYEVLKMASSASKDAVWLYNRGEGVDKLLDYNCTASSQRTIRAFRDDTEFGRIIT 360

Query: 119 PVTFCTKPAAIARAFNSLFVLLDVKMMLTSTSSHNSEYDIGKLFFSSLGSVCTISDCILR 178
           PV+   KPAA++RA +SL VL D+ ++L  TSS NSEYD+  LFFSSLGSV TISDCILR
Sbjct: 361 PVSLRKKPAALSRALHSLSVLQDISILL--TSSLNSEYDVETLFFSSLGSVSTISDCILR 418

Query: 179 KMRGFLMVISLDCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPVPKTSL 238
           K+RGFLMVISLDCT                                     QNP  K+S+
Sbjct: 419 KLRGFLMVISLDCT-KHELLEEFDKPSSGKPKEKLGLSNRKKKGRTRNTKKQNPAQKSSV 477

Query: 239 GDISRENPLKDIDCTMDNKMKSDLMGSRELPDVSLGKEISMGNSSSTVKMV 289
             +S EN  KDIDC +DN+ K+D+   RELPDV L K+IS   SSSTVK+V
Sbjct: 478 NGVSHENIHKDIDCIVDNEKKTDIAKPRELPDVPLVKDISTEGSSSTVKIV 528