Miyakogusa Predicted Gene

Lj3g3v1428150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1428150.1 Non Characterized Hit- tr|I1JKW3|I1JKW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28491
PE,31.83,2e-16,seg,NULL,CUFF.42636.1
         (314 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g039110.1 | transcription factor | HC | chr7:14540437-1453...   369   e-102

>Medtr7g039110.1 | transcription factor | HC |
           chr7:14540437-14537564 | 20130731
          Length = 339

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/327 (62%), Positives = 231/327 (70%), Gaps = 19/327 (5%)

Query: 1   MSQCVPSWDIDDNP-PPPRA-SLRSNSNSTAP-DVSMLDYDVAELTWENGQPSMHGLGLP 57
           MSQCVPSWD+D+NP PPPR+ SLRSNSNST P DV MLDYDVAELTWENGQ SMHGLGLP
Sbjct: 1   MSQCVPSWDVDENPQPPPRSVSLRSNSNSTNPHDVPMLDYDVAELTWENGQISMHGLGLP 60

Query: 58  RVPVKSSTTTTNTAPHKEAWEKPRGSGTLESIVNQATTLPQWGKSSFVGGDNIGGVYGNV 117
           +VP K  +T   T P KE WEKPRGSGTLESIVNQAT+ P  GKS F+ G   GGVYGN+
Sbjct: 61  KVPHKHPSTA-GTTPSKETWEKPRGSGTLESIVNQATSFPHRGKSPFLAG---GGVYGNM 116

Query: 118 LVPWLNPHRXXXXXXXXX-XNTMTMDALVPCTNRSEEKSTQVIDSAAXXXXXXXXXXXXX 176
           LVPWL+P R           N M +DALVPC+N ++E+ T  +D                
Sbjct: 117 LVPWLDPQRAAAIAAATAASNGMAVDALVPCSNTTKEQRTHAMDPVPRSGIGSCMVGGHT 176

Query: 177 RVGSCSGVAATAAREDGAFLAEVAKRGKVATTRVPANSRDQSVSGSATFGMNSQHVTLDT 236
            VGSCS V A    E G   A  AKRG+VA   V  + RDQS+SGSATFG  SQ VTLDT
Sbjct: 177 PVGSCSAVVAATQDEGGILAASAAKRGRVA--HVAGSGRDQSMSGSATFGRQSQQVTLDT 234

Query: 237 CDMEFGL-GFTSTSIGSLENT-------KTTTVDDHDSVCHSKPTRGDG-AEERKRENRK 287
            D EFG+ GFTSTSI S++NT       +TTT+DDHDSVCHS+P R +   +E+KRENRK
Sbjct: 235 YDREFGMTGFTSTSIASMDNTSSEKQCTRTTTIDDHDSVCHSRPPREEADVDEKKRENRK 294

Query: 288 SSVCTKRSRAAAIHNQSERKRRDKINQ 314
           SSV TKRSRAAAIHNQSERKRRDKINQ
Sbjct: 295 SSVSTKRSRAAAIHNQSERKRRDKINQ 321