Miyakogusa Predicted Gene

Lj3g3v1424000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1424000.1 tr|B9I3Z1|B9I3Z1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_773261 PE=4 SV=1,54.95,4e-19,
,81788_g.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g078390.2 | hypothetical protein | HC | chr2:32656592-3266...   136   5e-33
Medtr2g078390.1 | hypothetical protein | HC | chr2:32656609-3266...   136   6e-33

>Medtr2g078390.2 | hypothetical protein | HC |
           chr2:32656592-32668209 | 20130731
          Length = 480

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 73/134 (54%), Positives = 86/134 (64%), Gaps = 18/134 (13%)

Query: 1   MMGLTFYELWYSSIPKEFQWIDSDQFDLQENSHVDETSFSNEVG---------------- 44
           MMGLTFYELWYS IP  F+W D DQ D QENSH + TSFSN VG                
Sbjct: 194 MMGLTFYELWYSGIPDVFKWRDLDQIDRQENSHTEGTSFSNRVGHCQENSHTEGISFSNR 253

Query: 45  --QSEWHDSVETHMADSQYQCDSDASVMNDRKISRDVGFNEDRGVFMEVDVNHNREKPDQ 102
             QSEW++SVE+HMADSQYQCDSD+SVM   +IS ++G N+D  V M+VD NH REK   
Sbjct: 254 VGQSEWYNSVESHMADSQYQCDSDSSVMGGGQISGEIGTNKDMIVSMDVDTNHRREKSHP 313

Query: 103 NFHSQGFYLNSEEH 116
                GF L S+E+
Sbjct: 314 IIEVGGFSLTSDEN 327


>Medtr2g078390.1 | hypothetical protein | HC |
           chr2:32656609-32669313 | 20130731
          Length = 634

 Score =  136 bits (343), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 73/134 (54%), Positives = 86/134 (64%), Gaps = 18/134 (13%)

Query: 1   MMGLTFYELWYSSIPKEFQWIDSDQFDLQENSHVDETSFSNEVG---------------- 44
           MMGLTFYELWYS IP  F+W D DQ D QENSH + TSFSN VG                
Sbjct: 194 MMGLTFYELWYSGIPDVFKWRDLDQIDRQENSHTEGTSFSNRVGHCQENSHTEGISFSNR 253

Query: 45  --QSEWHDSVETHMADSQYQCDSDASVMNDRKISRDVGFNEDRGVFMEVDVNHNREKPDQ 102
             QSEW++SVE+HMADSQYQCDSD+SVM   +IS ++G N+D  V M+VD NH REK   
Sbjct: 254 VGQSEWYNSVESHMADSQYQCDSDSSVMGGGQISGEIGTNKDMIVSMDVDTNHRREKSHP 313

Query: 103 NFHSQGFYLNSEEH 116
                GF L S+E+
Sbjct: 314 IIEVGGFSLTSDEN 327