Miyakogusa Predicted Gene
- Lj3g3v1411740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1411740.1 tr|Q6JAD5|Q6JAD5_MAIZE TATA sequence-binding
protein 1 (TBP-1) OS=Zea mays GN=Z477F24.5 PE=3
SV=1,31.96,0.0000000009,TATA-box binding protein-like,NULL; no
description,Beta2-adaptin/TBP, C-terminal domain;
TATA_bind_p,CUFF.42607.1
(200 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g072580.3 | transcription factor TFIID protein | HC | chr7... 401 e-112
Medtr7g072580.1 | transcription factor TFIID protein | HC | chr7... 400 e-112
Medtr7g072580.2 | transcription factor TFIID protein | HC | chr7... 400 e-112
Medtr4g029010.1 | transcription factor TFIID protein | HC | chr4... 396 e-111
Medtr3g065900.1 | TATA-box-binding protein | HC | chr3:29757935-... 288 2e-78
Medtr4g029010.3 | transcription factor TFIID protein | HC | chr4... 286 8e-78
Medtr4g029010.2 | transcription factor TFIID protein | HC | chr4... 286 9e-78
Medtr7g072580.4 | transcription factor TFIID protein | HC | chr7... 282 1e-76
Medtr3g066070.1 | TATA-box-binding protein | HC | chr3:29852763-... 255 2e-68
Medtr3g065900.2 | TATA-box-binding protein | HC | chr3:29757853-... 250 6e-67
Medtr3g066070.2 | TATA-box-binding protein | HC | chr3:29853024-... 247 7e-66
Medtr3g066070.3 | TATA-box-binding protein | HC | chr3:29853024-... 247 7e-66
Medtr3g066070.4 | TATA-box-binding protein | HC | chr3:29853024-... 217 6e-57
Medtr3g066070.5 | TATA-box-binding protein | HC | chr3:29853024-... 217 6e-57
Medtr3g066070.6 | TATA-box-binding protein | HC | chr3:29853024-... 217 7e-57
Medtr3g066070.7 | TATA-box-binding protein | HC | chr3:29852027-... 215 2e-56
Medtr3g066070.8 | TATA-box-binding protein | HC | chr3:29853015-... 161 4e-40
Medtr4g122610.1 | transcription factor TFIID protein | HC | chr4... 132 2e-31
Medtr3g066070.9 | TATA-box-binding protein | HC | chr3:29853024-... 132 3e-31
Medtr4g122635.1 | TATA-box-binding protein | LC | chr4:50571501-... 101 4e-22
>Medtr7g072580.3 | transcription factor TFIID protein | HC |
chr7:27011311-27016034 | 20130731
Length = 200
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/200 (97%), Positives = 197/200 (98%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
Query: 181 TYTAFENIYPVLTEFRKNQQ 200
TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200
>Medtr7g072580.1 | transcription factor TFIID protein | HC |
chr7:27011330-27015785 | 20130731
Length = 242
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/200 (97%), Positives = 197/200 (98%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
Query: 181 TYTAFENIYPVLTEFRKNQQ 200
TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200
>Medtr7g072580.2 | transcription factor TFIID protein | HC |
chr7:27011330-27015785 | 20130731
Length = 242
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/200 (97%), Positives = 197/200 (98%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
Query: 181 TYTAFENIYPVLTEFRKNQQ 200
TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200
>Medtr4g029010.1 | transcription factor TFIID protein | HC |
chr4:9989702-9985140 | 20130731
Length = 205
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/200 (96%), Positives = 195/200 (97%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLD KLDLK IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLAKHPSGIVPTLQNIVSTVNLDTKLDLKAIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMK+PKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKKPKIVLLIFVSGKIVLTGAKVREE 180
Query: 181 TYTAFENIYPVLTEFRKNQQ 200
TY AFE IYPVLTEFRKNQQ
Sbjct: 181 TYLAFEQIYPVLTEFRKNQQ 200
>Medtr3g065900.1 | TATA-box-binding protein | HC |
chr3:29757935-29760845 | 20130731
Length = 211
Score = 288 bits (738), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/200 (72%), Positives = 157/200 (78%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
M +QG E Q V LQ HPSGI PT+ NIVSTVNLDCKLDL++I LQA AEYNP+R AV
Sbjct: 1 MDEQGFEEKQSVKLQNHPSGIAPTIINIVSTVNLDCKLDLQSIKLQAPTAEYNPQRHPAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
+MRIR P++ A I + G MVCTGAK+E QSKLAA KYA II+K+GF KFKDFKIQ IVG
Sbjct: 61 VMRIRAPESKAQINSFGMMVCTGAKNESQSKLAASKYAAIIRKMGFPTKFKDFKIQEIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
SCDVKFPI LE LA SH A SSY P LFP LIY MKQPKIVL IF SGKI L G K RDE
Sbjct: 121 SCDVKFPIHLERLANSHAACSSYNPVLFPWLIYEMKQPKIVLYIFNSGKIHLKGTKSRDE 180
Query: 181 TYTAFENIYPVLTEFRKNQQ 200
+TAFE IYPVLTEFRKNQQ
Sbjct: 181 IFTAFEKIYPVLTEFRKNQQ 200
>Medtr4g029010.3 | transcription factor TFIID protein | HC |
chr4:9989725-9985074 | 20130731
Length = 176
Score = 286 bits (732), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 139/142 (97%), Positives = 139/142 (97%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLD KLDLK IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLAKHPSGIVPTLQNIVSTVNLDTKLDLKAIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSS 142
SCDVKFPIRLEGLAYSHGAFSS
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSS 142
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174
+QNIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V TG
Sbjct: 25 LQNIVSTVNLDTKLDLKAIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 83
Query: 175 AKVRDETYTA 184
AK ++ A
Sbjct: 84 AKSEQQSKLA 93
>Medtr4g029010.2 | transcription factor TFIID protein | HC |
chr4:9989702-9985275 | 20130731
Length = 145
Score = 286 bits (732), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 141/145 (97%), Positives = 141/145 (97%), Gaps = 1/145 (0%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLD KLDLK IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLAKHPSGIVPTLQNIVSTVNLDTKLDLKAIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEP 145
SCDVKFPIRLEGLAYSHGAFSS EP
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSS-EP 144
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174
+QNIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V TG
Sbjct: 25 LQNIVSTVNLDTKLDLKAIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 83
Query: 175 AKVRDETYTA 184
AK ++ A
Sbjct: 84 AKSEQQSKLA 93
>Medtr7g072580.4 | transcription factor TFIID protein | HC |
chr7:27011311-27016034 | 20130731
Length = 160
Score = 282 bits (722), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/142 (96%), Positives = 139/142 (97%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
MADQGLEGSQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAV
Sbjct: 1 MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAV 60
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
IMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61 IMRIREPKTTALIFASGKMVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
Query: 121 SCDVKFPIRLEGLAYSHGAFSS 142
SCDVKFPIRLEGLAYSHGAFSS
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSS 142
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174
+QNIV + ++ + L+ +A + Y P+ F +I R+++PK LIF SGK+V TG
Sbjct: 25 LQNIVSTVNLDCKLELKSIAL-QARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 83
Query: 175 AK 176
AK
Sbjct: 84 AK 85
>Medtr3g066070.1 | TATA-box-binding protein | HC |
chr3:29852763-29849225 | 20130731
Length = 236
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 138/175 (78%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G MVCTG K
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMMVCTGTK 118
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
SE QSKLAA KYA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 119 SESQSKLAASKYAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 178
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 179 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 233
>Medtr3g065900.2 | TATA-box-binding protein | HC |
chr3:29757853-29761516 | 20130731
Length = 197
Score = 250 bits (638), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/200 (65%), Positives = 142/200 (71%), Gaps = 17/200 (8%)
Query: 1 MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60
M +QG E Q V LQ HPSGI PT+ NIVSTVNLDCKLDL++I LQA AEYNP+R AV
Sbjct: 15 MDEQGFEEKQSVKLQNHPSGIAPTIINIVSTVNLDCKLDLQSIKLQAPTAEYNPQRHPAV 74
Query: 61 IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVG 120
+MRIR P++ A I + G M YA II+K+GF KFKDFKIQ IVG
Sbjct: 75 VMRIRAPESKAQINSFGMM-----------------YAAIIRKMGFPTKFKDFKIQEIVG 117
Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180
SCDVKFPI LE LA SH A SSY P LFP LIY MKQPKIVL IF SGKI L G K RDE
Sbjct: 118 SCDVKFPIHLERLANSHAACSSYNPVLFPWLIYEMKQPKIVLYIFNSGKIHLKGTKSRDE 177
Query: 181 TYTAFENIYPVLTEFRKNQQ 200
+TAFE IYPVLTEFRKNQQ
Sbjct: 178 IFTAFEKIYPVLTEFRKNQQ 197
>Medtr3g066070.2 | TATA-box-binding protein | HC |
chr3:29853024-29848584 | 20130731
Length = 230
Score = 247 bits (630), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G MVCTG K
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMMVCTGTK 118
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
SE QSKLA YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 119 SESQSKLA---YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 175
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 176 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 230
>Medtr3g066070.3 | TATA-box-binding protein | HC |
chr3:29853024-29848584 | 20130731
Length = 230
Score = 247 bits (630), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G MVCTG K
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMMVCTGTK 118
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
SE QSKLA YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 119 SESQSKLA---YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 175
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 176 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 230
>Medtr3g066070.4 | TATA-box-binding protein | HC |
chr3:29853024-29848581 | 20130731
Length = 216
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 124/175 (70%), Gaps = 17/175 (9%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G M
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMM------ 112
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 113 -----------YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 161
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 162 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 216
>Medtr3g066070.5 | TATA-box-binding protein | HC |
chr3:29853024-29848581 | 20130731
Length = 216
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 124/175 (70%), Gaps = 17/175 (9%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G M
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMM------ 112
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 113 -----------YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 161
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 162 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 216
>Medtr3g066070.6 | TATA-box-binding protein | HC |
chr3:29853024-29848581 | 20130731
Length = 219
Score = 217 bits (552), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 124/175 (70%), Gaps = 17/175 (9%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G M
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMM------ 112
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 113 -----------YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 161
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 162 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 216
>Medtr3g066070.7 | TATA-box-binding protein | HC |
chr3:29852027-29848584 | 20130731
Length = 167
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 124/175 (70%), Gaps = 17/175 (9%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G M
Sbjct: 10 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMM------ 63
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 145
YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SSY P
Sbjct: 64 -----------YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSSYNP 112
Query: 146 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
LFP IY MKQ KIVL IF SGKI L G K RDE +TAFENIYPVLTEFRKNQQ
Sbjct: 113 VLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEIFTAFENIYPVLTEFRKNQQ 167
>Medtr3g066070.8 | TATA-box-binding protein | HC |
chr3:29853015-29848584 | 20130731
Length = 125
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 94/139 (67%), Gaps = 17/139 (12%)
Query: 62 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGS 121
MRIR P++ A I + G M YA II+K GF KFKDFKIQ IVGS
Sbjct: 1 MRIRAPESKAQINSFGMM-----------------YAAIIRKTGFPTKFKDFKIQEIVGS 43
Query: 122 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDET 181
CDVKFPI L+ LA+SH A SSY P LFP IY MKQ KIVL IF SGKI L G K RDE
Sbjct: 44 CDVKFPIHLQRLAHSHAACSSYNPVLFPWQIYEMKQAKIVLHIFDSGKIHLKGTKSRDEI 103
Query: 182 YTAFENIYPVLTEFRKNQQ 200
+TAFENIYPVLTEFRKNQQ
Sbjct: 104 FTAFENIYPVLTEFRKNQQ 122
>Medtr4g122610.1 | transcription factor TFIID protein | HC |
chr4:50565802-50567542 | 20130731
Length = 162
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 91/138 (65%), Gaps = 28/138 (20%)
Query: 1 MADQGLEGSQ-PVDLQKHPSG--IVPTL---QNIVSTVNLDCKLDLKTIALQARNAEYNP 54
MADQ ++ SQ VDLQKHPSG I P L QN+VSTVN CKLDL+ IALQ+R+A Y P
Sbjct: 1 MADQEMQDSQQAVDLQKHPSGAAIAPNLNNVQNLVSTVNWMCKLDLEAIALQSRSAVYKP 60
Query: 55 K---------------------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 93
K F +IM+IR+PK TALI++SGKM+CTG +E+QSKLA
Sbjct: 61 KASFICSFIVNLIQIPSVLCMQHFPFLIMKIRKPKATALIYSSGKMICTGG-NEKQSKLA 119
Query: 94 ARKYARIIQKLGFNAKFK 111
ARKY RIIQK GF KFK
Sbjct: 120 ARKYTRIIQKCGFPVKFK 137
>Medtr3g066070.9 | TATA-box-binding protein | HC |
chr3:29853024-29848584 | 20130731
Length = 162
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 17/117 (14%)
Query: 26 QNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 85
+NIVSTVNLDCKLDL +I LQA AEYNP+R AVIMRIR P++ A I + G M
Sbjct: 59 RNIVSTVNLDCKLDLNSIKLQAPTAEYNPQRHPAVIMRIRAPESKAQINSFGMM------ 112
Query: 86 SEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142
YA II+K GF KFKDFKIQ IVGSCDVKFPI L+ LA+SH A SS
Sbjct: 113 -----------YAAIIRKTGFPTKFKDFKIQEIVGSCDVKFPIHLQRLAHSHAACSS 158
>Medtr4g122635.1 | TATA-box-binding protein | LC |
chr4:50571501-50573583 | 20130731
Length = 133
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 81/136 (59%), Gaps = 29/136 (21%)
Query: 15 QKHPSG--IVPTL---QNIVSTVNLDCKLDLKTIALQARNAE---YNPKRFAAVIMRIRE 66
+ P+G I PTL QNIVSTVN KLDLK I LQA N Y PKR ++M+IRE
Sbjct: 3 ESQPAGVAIAPTLKNVQNIVSTVNWGRKLDLKAIGLQAPNTRIVTYKPKRIPFLVMKIRE 62
Query: 67 PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFNAKFKDFKIQNIVGSCDVKF 126
PKTTALI ASG M TG I+QKLGF AKF+DFKI++ +V F
Sbjct: 63 PKTTALISASGMM--TG----------------IMQKLGFPAKFEDFKIRS---QMNVNF 101
Query: 127 PIRLEGLAYSHGAFSS 142
L+GLA S+GA SS
Sbjct: 102 RKWLDGLARSYGASSS 117