Miyakogusa Predicted Gene
- Lj3g3v1404130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1404130.1 tr|F2CQ55|F2CQ55_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,30.72,4e-18,DUF966,Protein
of unknown function DUF966; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.42563.1
(463 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g057330.1 | auxin-regulated protein | HC | chr4:20983812-2... 627 e-179
Medtr4g057330.2 | auxin-regulated protein | HC | chr4:20983812-2... 537 e-153
Medtr2g084275.1 | auxin-regulated protein | HC | chr2:35459148-3... 478 e-135
Medtr4g063130.2 | auxin-regulated protein | HC | chr4:23360647-2... 129 8e-30
Medtr4g063130.1 | auxin-regulated protein | HC | chr4:23360644-2... 79 1e-14
Medtr1g115370.1 | DUF966 domain protein | HC | chr1:52069779-520... 69 1e-11
Medtr8g091300.1 | DUF966 domain protein | HC | chr8:38095364-380... 66 9e-11
Medtr2g062310.1 | DUF966 domain protein | HC | chr2:26306172-263... 56 7e-08
>Medtr4g057330.1 | auxin-regulated protein | HC |
chr4:20983812-20980996 | 20130731
Length = 514
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 323/434 (74%), Positives = 360/434 (82%), Gaps = 1/434 (0%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNSDNFSPISNVKM 60
MASLYSWS KRSY +GFVWHDL EDDLI PAHG EYVLKGSELFDESNSD FSPI++VK+
Sbjct: 77 MASLYSWSSKRSYKNGFVWHDLCEDDLIQPAHGNEYVLKGSELFDESNSDRFSPINDVKI 136
Query: 61 QNVKLLPGPAXXXXXXXXXXXXXMNGKETRTSQEDELSQEPHTGSSDVSPESRDEKSDSL 120
Q+VK+LPGP+ MNGKETR SQ+DE S E HTGSSDVSPESR EK+ L
Sbjct: 137 QSVKMLPGPSSCRSHDEASSSSSMNGKETRYSQDDEQSHEQHTGSSDVSPESRAEKTGPL 196
Query: 121 SLALTEYKIYKTDGLADASTQTEEQVSRTRAQKTCTRGVSTEDRSLEPECHEICQAEVPE 180
SLALTEYKIYK DGLADASTQTE+ ++R++ +K+CTRGVST+D SL ECHEICQ EVP+
Sbjct: 197 SLALTEYKIYKADGLADASTQTEDSINRSKTRKSCTRGVSTDDGSLISECHEICQTEVPQ 256
Query: 181 VKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKLSSFRTQEEEGAWVPPTNT 240
VK NP+ CKDTI K ETLESLIRADASK +SFR EEE +P TNT
Sbjct: 257 VKHNPETCKDTISPSPTTSSPLSFGGKMETLESLIRADASKANSFRILEEEDIPMP-TNT 315
Query: 241 RLKASNLLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFPSPLFSTSFMLGEFDCLAENP 300
RLKASNLLMQLISCGSISVKNHSFGLIPSYK RFS SKFPSPLFSTSF+LGE+DCL ENP
Sbjct: 316 RLKASNLLMQLISCGSISVKNHSFGLIPSYKPRFSHSKFPSPLFSTSFVLGEYDCLVENP 375
Query: 301 KLMNLRLEDKEYFSGSLIETKLKEGEAHKVLKRSSSYNDERTYKDQKPQEDKEETSSGHS 360
KLMNLRLEDKEYFSGSLIETKLKEG+A VLKRSSSYN+ERT K+QKP+E++EE SSGHS
Sbjct: 376 KLMNLRLEDKEYFSGSLIETKLKEGDARNVLKRSSSYNNERTNKEQKPKENEEEPSSGHS 435
Query: 361 KCIPRSIKASLTKHPRSESMKSPISDGPRNSSDRFDGLGISSVTSNGSSKRISEPSSGKK 420
KCIPRSIKASLTKHPR ESM+SPIS+GPR SSDR DG IS+++SN SS+RI+EPSSGKK
Sbjct: 436 KCIPRSIKASLTKHPRGESMRSPISEGPRTSSDRIDGSCISAISSNSSSQRITEPSSGKK 495
Query: 421 QSKRIDSFREEEYF 434
Q KR+DSFRE E
Sbjct: 496 QPKRVDSFRENEVI 509
>Medtr4g057330.2 | auxin-regulated protein | HC |
chr4:20983812-20980996 | 20130731
Length = 409
Score = 537 bits (1384), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/386 (72%), Positives = 317/386 (82%), Gaps = 1/386 (0%)
Query: 49 SDNFSPISNVKMQNVKLLPGPAXXXXXXXXXXXXXMNGKETRTSQEDELSQEPHTGSSDV 108
++ FSPI++VK+Q+VK+LPGP+ MNGKETR SQ+DE S E HTGSSDV
Sbjct: 20 TNRFSPINDVKIQSVKMLPGPSSCRSHDEASSSSSMNGKETRYSQDDEQSHEQHTGSSDV 79
Query: 109 SPESRDEKSDSLSLALTEYKIYKTDGLADASTQTEEQVSRTRAQKTCTRGVSTEDRSLEP 168
SPESR EK+ LSLALTEYKIYK DGLADASTQTE+ ++R++ +K+CTRGVST+D SL
Sbjct: 80 SPESRAEKTGPLSLALTEYKIYKADGLADASTQTEDSINRSKTRKSCTRGVSTDDGSLIS 139
Query: 169 ECHEICQAEVPEVKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKLSSFRTQ 228
ECHEICQ EVP+VK NP+ CKDTI K ETLESLIRADASK +SFR
Sbjct: 140 ECHEICQTEVPQVKHNPETCKDTISPSPTTSSPLSFGGKMETLESLIRADASKANSFRIL 199
Query: 229 EEEGAWVPPTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFPSPLFSTSF 288
EEE +P TNTRLKASNLLMQLISCGSISVKNHSFGLIPSYK RFS SKFPSPLFSTSF
Sbjct: 200 EEEDIPMP-TNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKPRFSHSKFPSPLFSTSF 258
Query: 289 MLGEFDCLAENPKLMNLRLEDKEYFSGSLIETKLKEGEAHKVLKRSSSYNDERTYKDQKP 348
+LGE+DCL ENPKLMNLRLEDKEYFSGSLIETKLKEG+A VLKRSSSYN+ERT K+QKP
Sbjct: 259 VLGEYDCLVENPKLMNLRLEDKEYFSGSLIETKLKEGDARNVLKRSSSYNNERTNKEQKP 318
Query: 349 QEDKEETSSGHSKCIPRSIKASLTKHPRSESMKSPISDGPRNSSDRFDGLGISSVTSNGS 408
+E++EE SSGHSKCIPRSIKASLTKHPR ESM+SPIS+GPR SSDR DG IS+++SN S
Sbjct: 319 KENEEEPSSGHSKCIPRSIKASLTKHPRGESMRSPISEGPRTSSDRIDGSCISAISSNSS 378
Query: 409 SKRISEPSSGKKQSKRIDSFREEEYF 434
S+RI+EPSSGKKQ KR+DSFRE E
Sbjct: 379 SQRITEPSSGKKQPKRVDSFRENEVI 404
>Medtr2g084275.1 | auxin-regulated protein | HC |
chr2:35459148-35463284 | 20130731
Length = 508
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 312/444 (70%), Gaps = 28/444 (6%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNSDNFSPISNVKM 60
MA LYSWSCKRSY +G+VWHDLSEDDLILPAHG EYVLKGSELF ESNSD FSPISNVK+
Sbjct: 78 MADLYSWSCKRSYKNGYVWHDLSEDDLILPAHGNEYVLKGSELFCESNSDRFSPISNVKL 137
Query: 61 QNVKLLPGPAX-XXXXXXXXXXXXMNGKETRTSQEDELSQEPHTGSSDVSPESRDEKSDS 119
Q++K LP P MN +E R SQEDE+S HTGSSD+SPES D KSDS
Sbjct: 138 QSLKRLPEPVSCRSHDEVSSSSSSMNEREGRNSQEDEISPRQHTGSSDISPESSDGKSDS 197
Query: 120 LSLALTEYKIYKTDGLADASTQTEEQVSRTRAQ--KTCTRGVSTEDRSLEPECHEICQAE 177
SL LTEYKIYKTD LADASTQTEE ++ ++Q KTCTRGVSTEDRS E EC++IC+ +
Sbjct: 198 QSLPLTEYKIYKTDRLADASTQTEECAAKHQSQTHKTCTRGVSTEDRSSESECNDICETQ 257
Query: 178 VPEVKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKLSSFRTQEEEGAWVPP 237
VKD ++C D + K ETLESLIRADAS+++SFR EE+G +
Sbjct: 258 AGHVKDGSEICSDVVSPPFSNSSPSSSGGKTETLESLIRADASRMNSFRILEEQGIQMQA 317
Query: 238 TNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFPSPLFSTSFMLGEFDCLA 297
+ TRLKASNLLMQLISCGSISVKNHS LIPSYK RFS SKFPSPLFS+S MLGE DC+
Sbjct: 318 S-TRLKASNLLMQLISCGSISVKNHSLDLIPSYKARFSHSKFPSPLFSSSVMLGELDCIG 376
Query: 298 ENPKLMNLRLEDKEYFSGSLIETKLKEGEAHKVLKRSSSYNDER----TYKDQK--PQED 351
NPK+ +LR++DKEYFSGSL+E+K+ + H VLKRSSS+N ER TY+ K ++
Sbjct: 377 GNPKVTSLRMDDKEYFSGSLVESKMAMEDGHNVLKRSSSFNAERTSAQTYRTSKELKSQN 436
Query: 352 KEETSSGHSKCIPRSI-KASLTKHPRSESMKSPISDGPRNSSDRFDGLGISSVTSNGSSK 410
E+SSG+SKC RS+ +S TK P SE +SPISDG R+S DR + GI
Sbjct: 437 MVESSSGNSKCNSRSVMTSSTTKSPPSEFSRSPISDGSRSSRDRTNDSGIR--------- 487
Query: 411 RISEPSSGKKQSKRIDSFREEEYF 434
+KQS R+DSFR+E+
Sbjct: 488 --------QKQSTRLDSFRDEKVV 503
>Medtr4g063130.2 | auxin-regulated protein | HC |
chr4:23360647-23365038 | 20130731
Length = 421
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 180/411 (43%), Gaps = 85/411 (20%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNSDNFSPISNVKM 60
M ++YSWS KRSY +GFVWHDL+E D I P G +Y+LKGSE+
Sbjct: 80 MPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEIL---------------- 123
Query: 61 QNVKLLPGPAXXXXXXXXXXXXXMNGKETRTSQEDELSQEPHTGSSDVSPESRDEKSDSL 120
E T+ L +E S V R +S S
Sbjct: 124 ---------------------------EHETTARPPLEEE---SDSPVVITRRRNQSWS- 152
Query: 121 SLALTEYKIYKTDGL-----ADASTQTEEQVSRTRAQKTCTRGVSTEDRSLEPECHEICQ 175
S+ L EY++YK++ L ADASTQTEE+ R R + E++ E +
Sbjct: 153 SIDLNEYRVYKSEPLGENIAADASTQTEEKRRRRRVLREEDEEQEEEEKEKNDEIEN--E 210
Query: 176 AEVPEVKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKLSSFRTQEEEGAWV 235
E + ++ ++ I ETL +L++ D +L +E
Sbjct: 211 GETENQNQSTELSREEI-------SPPPSDSSPETLGTLMKVDG-RLGLRSVPKENPTVE 262
Query: 236 PPTNTRLKASNLLMQLISCGSISVKNHS---------FGLIPSYKHRFSDSKFPSPLFST 286
+ R++AS++L+QL+SCG++S K S F L+ YK R P
Sbjct: 263 SCPSGRMRASSVLLQLLSCGAVSFKEGSGASSGKDQRFSLVGHYKSRL-------PRGGG 315
Query: 287 SFMLGEFDCLAENPKLMNLRLEDKEYFSGSLIETKLKEGEAHKVLKRSSSYNDERTYKDQ 346
+ + E L E P L +RLEDKEYFSGSLIETK E A KRSSSYN + +
Sbjct: 316 NHVGKEVGTLVEIPDLNRVRLEDKEYFSGSLIETKKVEAPA---FKRSSSYNADSS---- 368
Query: 347 KPQEDKEETSSGHSKCIPRSIKASLTKHPRSESMKSPISDGPRNSSDRFDG 397
+ Q + E +KCIPR K LTK S ++ S RF+G
Sbjct: 369 RLQIMEHEGDMVRAKCIPRKSKTLLTKKEEGTSSSMDSVSRSQHGSKRFEG 419
>Medtr4g063130.1 | auxin-regulated protein | HC |
chr4:23360644-23365038 | 20130731
Length = 422
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 209 ETLESLIRADASKLSSFRTQEEEGAWVPPTNTRLKASNLLMQLISCGSISVKNHS----- 263
ETL +L++ D +L +E + R++AS++L+QL+SCG++S K S
Sbjct: 237 ETLGTLMKVDG-RLGLRSVPKENPTVESCPSGRMRASSVLLQLLSCGAVSFKEGSGASSG 295
Query: 264 ----FGLIPSYKHRFSDSKFPSPLFSTSFMLGEFDCLAENPKLMNLRLEDKEYFSGSLIE 319
F L+ YK R P + + E L E P L +RLEDKEYFSGSLIE
Sbjct: 296 KDQRFSLVGHYKSRL-------PRGGGNHVGKEVGTLVEIPDLNRVRLEDKEYFSGSLIE 348
Query: 320 TKLKEGEAHKVLKRSSSYNDERTYKDQKPQEDKEETSSGHSKCIPRSIKASLTKHPRSES 379
TK E A K ++ + R Q + E +KCIPR K LTK S
Sbjct: 349 TKKVEAPAFKRSSSYNADSSSRL------QIMEHEGDMVRAKCIPRKSKTLLTKKEEGTS 402
Query: 380 MKSPISDGPRNSSDRFDG 397
++ S RF+G
Sbjct: 403 SSMDSVSRSQHGSKRFEG 420
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFD 45
M ++YSWS KRSY +GFVWHDL+E D I P G +Y+LKGSE+ +
Sbjct: 80 MPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEILE 124
>Medtr1g115370.1 | DUF966 domain protein | HC |
chr1:52069779-52068406 | 20130731
Length = 254
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNS 49
+A++YSWS KRSY +GFVW DLSE+DLI P+ EYVLKG+ L +E +S
Sbjct: 60 IANMYSWSTKRSYRNGFVWQDLSENDLIYPSSSHEYVLKGTLLIEEPSS 108
>Medtr8g091300.1 | DUF966 domain protein | HC |
chr8:38095364-38096989 | 20130731
Length = 409
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAH-GIEYVLKGSEL-------FDESNSDNF 52
M S YSWS KR+Y SG+VWHDL+ D+I P+ G EYVLKGSEL F + N +
Sbjct: 77 MPSQYSWSTKRNYKSGYVWHDLALKDIIHPSEGGAEYVLKGSELVEGCSERFQQLNLSDK 136
Query: 53 SPISNVKMQN 62
PI QN
Sbjct: 137 QPIQQHPEQN 146
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 15/132 (11%)
Query: 247 LLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFPSPLFSTSFMLGEFD-CLAENPKLM-N 304
+L+QLI+CGS + + + + SK + G+ D C+ ENP+LM N
Sbjct: 269 VLLQLIACGSSGAEMKAKQQEGRLSNVGTTSKRRESVDEEKVYSGDEDICVTENPRLMGN 328
Query: 305 LRLEDKEYFSGSLIETKLKEG----EAHKVLKRSSSYNDERT-------YKDQKPQEDKE 353
L+ E+KEYFSGS++E+ +K +A VLK+S+SYN+ER K ++ +E+K
Sbjct: 329 LQSEEKEYFSGSIVES-MKANRVAFQAEPVLKKSNSYNEERRSRLGMDEVKLKETKEEKR 387
Query: 354 ETSSG-HSKCIP 364
E G KCIP
Sbjct: 388 EAKGGVKEKCIP 399
>Medtr2g062310.1 | DUF966 domain protein | HC |
chr2:26306172-26303022 | 20130731
Length = 427
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 5 YSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSEL 43
++WS KR Y SG+VW DL +DDLI P EYVLKGS++
Sbjct: 61 FAWSYKRRYKSGYVWQDLMDDDLITPISDNEYVLKGSQI 99