Miyakogusa Predicted Gene

Lj3g3v1404030.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1404030.2 tr|A8J4S8|A8J4S8_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_17541,50,0.00000000004,no description,NULL;
2OG-FeII_Oxy_2,Oxoglutarate/iron-dependent dioxygenase; ALKYLATED DNA
REPAIR PR,CUFF.42548.2
         (396 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g029340.1 | 2OG-Fe(II) oxygenase family protein | HC | chr...   230   2e-60

>Medtr4g029340.1 | 2OG-Fe(II) oxygenase family protein | HC |
           chr4:10132411-10135109 | 20130731
          Length = 325

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/285 (48%), Positives = 169/285 (59%), Gaps = 57/285 (20%)

Query: 114 MSRSDHLPSPATSTCSQHRKSKRRTRIDLGLTKDSGDNCSESSCGSSFENTQNSNVSLTR 173
           MS  DHLPSP +ST S+  K KR+ R+DLGL  +  +N S  S   S  +  + N+S T 
Sbjct: 1   MSSCDHLPSPPSSTVSEQSKFKRKIRVDLGLGPEK-ENKSSKSSFCSSFHDSDGNISTT- 58

Query: 174 HSDESPQPSQFLKKSASANRPYHIQHNLNCKEAGYDRDSPGSTPKFERYDICFHGKRNSP 233
                        K+ S  + +         ++  +    G+TP                
Sbjct: 59  -------------KTLSVTKEF---------KSHCESHQQGATP---------------- 80

Query: 234 LIGGSTLFEKNSESSIE--MEDGATK----EGVLRPGMVLLKHCITHIEQVEIVKRCRKL 287
                   EKN +S IE  M+DG T     + +LRPGMVLLKH +TH EQVEIVK+CR L
Sbjct: 81  -------LEKNKDSCIEFEMQDGGTNKETNDVILRPGMVLLKHHLTHEEQVEIVKKCRDL 133

Query: 288 GLGPGGFYQPCFASGAKLRLRMMCLGMDWDPQTKKYGNKRAFDSSKPPDIPPYFRSLVIR 347
           GLGPGGFYQP +  GAK RL+MMCLGMDWDPQT+KYG KR  D SKPP IP YF  LVIR
Sbjct: 134 GLGPGGFYQPGYGDGAKFRLKMMCLGMDWDPQTRKYGYKREIDGSKPPSIPHYFSKLVIR 193

Query: 348 AIQKAQDLIPREHDISNVEDILPSMTPDIGIVNFYTTYGRLGLHQ 392
           +IQ+A++LI +E    +VE ILPS+TPDI IVNFY T GRLGLHQ
Sbjct: 194 SIQEARNLINQE----SVEHILPSITPDICIVNFYLTNGRLGLHQ 234