Miyakogusa Predicted Gene

Lj3g3v1404030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1404030.1 Non Characterized Hit- tr|H0B475|H0B475_9ACTO
Putative DNA repair protein OS=Streptomyces sp. W007
G,30.84,2e-18,seg,NULL; Clavaminate synthase-like,NULL;
FE2OG_OXY,Oxoglutarate/iron-dependent dioxygenase;
2OG-FeI,CUFF.42548.1
         (483 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g029340.1 | 2OG-Fe(II) oxygenase family protein | HC | chr...   380   e-105
Medtr3g085290.1 | 2OG-Fe(II) oxygenase family protein | HC | chr...    57   4e-08

>Medtr4g029340.1 | 2OG-Fe(II) oxygenase family protein | HC |
           chr4:10132411-10135109 | 20130731
          Length = 325

 Score =  380 bits (976), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/376 (56%), Positives = 251/376 (66%), Gaps = 57/376 (15%)

Query: 114 MSRSDHLPSPATSTCSQHRKSKRRTRIDLGLTKDSGDNCSESSCGSSFENTQNSNVSLTR 173
           MS  DHLPSP +ST S+  K KR+ R+DLGL  +  +N S  S   S  +  + N+S T 
Sbjct: 1   MSSCDHLPSPPSSTVSEQSKFKRKIRVDLGLGPEK-ENKSSKSSFCSSFHDSDGNISTT- 58

Query: 174 HSDESPQPSQFLKKSASANRPYHIQHNLNCKEAGYDRDSPGSTPKFERYDICFHGKRNSP 233
                        K+ S  + +         ++  +    G+TP                
Sbjct: 59  -------------KTLSVTKEF---------KSHCESHQQGATP---------------- 80

Query: 234 LIGGSTLFEKNSESSIE--MEDGATK----EGVLRPGMVLLKHCITHIEQVEIVKRCRKL 287
                   EKN +S IE  M+DG T     + +LRPGMVLLKH +TH EQVEIVK+CR L
Sbjct: 81  -------LEKNKDSCIEFEMQDGGTNKETNDVILRPGMVLLKHHLTHEEQVEIVKKCRDL 133

Query: 288 GLGPGGFYQPCFASGAKLRLRMMCLGMDWDPQTKKYGNKRAFDSSKPPDIPPYFRSLVIR 347
           GLGPGGFYQP +  GAK RL+MMCLGMDWDPQT+KYG KR  D SKPP IP YF  LVIR
Sbjct: 134 GLGPGGFYQPGYGDGAKFRLKMMCLGMDWDPQTRKYGYKREIDGSKPPSIPHYFSKLVIR 193

Query: 348 AIQKAQDLIPREHDISNVEDILPSMTPDIGIVNFYTTYGRLGLHQDRDESRESIRKRLPV 407
           +IQ+A++LI +E    +VE ILPS+TPDI IVNFY T GRLGLHQDRDESRES++K LPV
Sbjct: 194 SIQEARNLINQE----SVEHILPSITPDICIVNFYLTNGRLGLHQDRDESRESLQKGLPV 249

Query: 408 VSFSIGDSAEFLYGDERDVEKAERVLLESGDVLIFGGESRLVLHGVSSIIPESAPPELLQ 467
           VSFSIGDSAEFLY D+R+VEKAE VLLESGDVLIFGGESR V HGVSSII  SAP EL+Q
Sbjct: 250 VSFSIGDSAEFLYSDQRNVEKAENVLLESGDVLIFGGESRHVYHGVSSIIQNSAPDELVQ 309

Query: 468 DTRLCPGRLNLTFRQY 483
           DT LCPGRLNLTFRQY
Sbjct: 310 DTCLCPGRLNLTFRQY 325


>Medtr3g085290.1 | 2OG-Fe(II) oxygenase family protein | HC |
           chr3:38539455-38545123 | 20130731
          Length = 359

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 37/198 (18%)

Query: 300 ASGAKL--RLRMMCLGMDWDPQTKKYGNKRAFDSSKPPDIPPYFRSLVIRAIQKAQDLIP 357
            SG+ L  +LR   LG+ +D   + Y    +   +K P+      +L   A Q A+  +P
Sbjct: 182 VSGSSLLRKLRWSTLGLQFDWSNRNYN--VSLQHNKIPE------ALCELAKQLAKPAMP 233

Query: 358 REHDISNVEDILPSMTPDIGIVNFYTTYGRLGLHQDRDESRESIRKRLPVVSFSIGDSAE 417
                + VE       P+  IVN++ +   LG H D  E+  S     P+VS S+G  A 
Sbjct: 234 -----AGVE-----FHPEAAIVNYFASGDTLGGHLDDMEADWS----KPIVSLSLGCKAI 279

Query: 418 FLYGDERDVEKAERVLLESGDVLIFGGESRLVLHGVSSIIPESAPPE-------LLQDTR 470
           FL G +   +    + L SGDV++  GE+R   HGV  I  +    E       L  +  
Sbjct: 280 FLLGGKSREDAPLAMFLRSGDVVLMAGEARECFHGVPRIFADKENAEIDHLETQLTHEDD 339

Query: 471 LC------PGRLNLTFRQ 482
           +C        R+N+  RQ
Sbjct: 340 ICFLKYIQTSRININIRQ 357