Miyakogusa Predicted Gene

Lj3g3v1340540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1340540.1 Non Characterized Hit- tr|I1LU79|I1LU79_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.36,0,seg,NULL;
Cyclin,Cyclin PHO80-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL; Cyclin-like,Cycl,CUFF.42479.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g088860.1 | cyclin p4 | HC | chr2:37475502-37474092 | 2013...   339   1e-93
Medtr7g081130.1 | cyclin p4 | HC | chr7:30934930-30933268 | 2013...   161   5e-40
Medtr8g007380.1 | cyclin p4 | HC | chr8:1499976-1501648 | 20130731    150   1e-36
Medtr7g094880.1 | cyclin p4 | HC | chr7:37892086-37894536 | 2013...   142   2e-34
Medtr7g094880.2 | cyclin p4 | HC | chr7:37891633-37894536 | 2013...   142   2e-34
Medtr4g028060.1 | cyclin p4 | HC | chr4:9659806-9657678 | 20130731    121   7e-28

>Medtr2g088860.1 | cyclin p4 | HC | chr2:37475502-37474092 |
           20130731
          Length = 233

 Score =  339 bits (869), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 175/237 (73%), Positives = 187/237 (78%), Gaps = 10/237 (4%)

Query: 1   MLTVGEYSNNGRQLQQPETIETGPTELNLPRVLWVLSSMLEKLVARNENL-----QQLDG 55
           MLT  EYSN+ RQ  QP T   GP ELNLPRVLW+LSS LEKLV+RNE L     Q+LD 
Sbjct: 1   MLTASEYSNHSRQ-NQPVT---GPAELNLPRVLWILSSTLEKLVSRNEKLVDELNQELDK 56

Query: 56  -DGGPVRLGKSLNAFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDS 114
            + G VRLGKSLN FHGVRAP ISIPKYLERIYKYTNCSPSCFVVGYVYID LTH+HPDS
Sbjct: 57  LNNGSVRLGKSLNLFHGVRAPGISIPKYLERIYKYTNCSPSCFVVGYVYIDMLTHKHPDS 116

Query: 115 LVISLNVHRLLVTSVMVASKILDDEHYNNAVYARVGGVSNVXXXXXXXXXXXXXDFRVTV 174
           LV+SLNVHRLLVTSVMVASK+LDDEHYNNAVYARVGGVSN              DF+V V
Sbjct: 117 LVLSLNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAELNKLELELLFLLDFKVMV 176

Query: 175 TSRAFESYCFHLEKEMLVNGTGLKIERALTPKAIENEISVGDNQSSSPPQIVEIGLT 231
             R FESYC HLEKEMLVNGTGLKIER L+PK+ E EISV D QSSSPP IV+ GLT
Sbjct: 177 CPRVFESYCLHLEKEMLVNGTGLKIERILSPKSFETEISVEDQQSSSPPPIVDYGLT 233


>Medtr7g081130.1 | cyclin p4 | HC | chr7:30934930-30933268 |
           20130731
          Length = 203

 Score =  161 bits (408), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 8/164 (4%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           +P+++  LSS+L+++   N+  QQL        L + ++ F G+  P+ISI  YLERI+K
Sbjct: 10  MPKLIAFLSSLLKRVAESNDINQQL--------LEQKISVFQGLTCPNISIQNYLERIFK 61

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           Y NCSPSCF+V YVY+DR T R P   + S NVHRLL+TSVMVA+K +DD +YNNA YA+
Sbjct: 62  YANCSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAK 121

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLV 192
           VGG++ +              F + VT   F++YC HL+ EM++
Sbjct: 122 VGGITTIEMNFLELDFLFGLGFHLNVTPNTFQAYCVHLQSEMMM 165


>Medtr8g007380.1 | cyclin p4 | HC | chr8:1499976-1501648 | 20130731
          Length = 200

 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           +P+++  LSS+LE++   N+  Q              ++ FHG+  P+ISI  YLERI+K
Sbjct: 9   MPKLINFLSSLLERVAESNDETQN----------HHKISIFHGLSRPNISIQSYLERIFK 58

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           Y NCS SCF+V YVY+DR T   P   + S NVHRLL+TSVMVA+K +DD  YNNA YA+
Sbjct: 59  YANCSSSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDDVCYNNAYYAK 118

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALT-PKA 207
           VGG++                F + VT   F++YC HL++EML     +  +  L+  K+
Sbjct: 119 VGGITKTEMNFLELDFLFGLGFNLNVTPVTFQAYCVHLQREMLQMQPLVFEDSTLSLAKS 178

Query: 208 IENEISVGDNQSSSPPQ 224
           ++  + + +++SS   Q
Sbjct: 179 LKAHLCLNEDESSHQNQ 195


>Medtr7g094880.1 | cyclin p4 | HC | chr7:37892086-37894536 |
           20130731
          Length = 233

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 117/193 (60%), Gaps = 10/193 (5%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           +PRVL +LSS+LE+ V +NE L + +       +   +  FHG+ AP++S+ KY++RI+K
Sbjct: 45  VPRVLSLLSSLLERSVQKNEMLVETE------HIEDVVTVFHGLSAPTLSLRKYIDRIFK 98

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           Y+ CSPSCFVV ++Y+DRL       L  SLNVHRLL+TS+M+A+K +DD  +NNA YAR
Sbjct: 99  YSGCSPSCFVVAHIYVDRLLQNTEIKLT-SLNVHRLLITSIMLAAKFMDDAFFNNAYYAR 157

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTPKAI 208
           VGGV                DFR+ V+   F  YC+ LE+E L     L+IER +    I
Sbjct: 158 VGGVKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEEGL---ETLQIERPMQACRI 214

Query: 209 ENEISVGDNQSSS 221
           +   S  D+ S +
Sbjct: 215 KESWSNKDDPSCA 227


>Medtr7g094880.2 | cyclin p4 | HC | chr7:37891633-37894536 |
           20130731
          Length = 218

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 117/193 (60%), Gaps = 10/193 (5%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           +PRVL +LSS+LE+ V +NE L + +       +   +  FHG+ AP++S+ KY++RI+K
Sbjct: 30  VPRVLSLLSSLLERSVQKNEMLVETE------HIEDVVTVFHGLSAPTLSLRKYIDRIFK 83

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           Y+ CSPSCFVV ++Y+DRL       L  SLNVHRLL+TS+M+A+K +DD  +NNA YAR
Sbjct: 84  YSGCSPSCFVVAHIYVDRLLQNTEIKLT-SLNVHRLLITSIMLAAKFMDDAFFNNAYYAR 142

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERALTPKAI 208
           VGGV                DFR+ V+   F  YC+ LE+E L     L+IER +    I
Sbjct: 143 VGGVKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEEGL---ETLQIERPMQACRI 199

Query: 209 ENEISVGDNQSSS 221
           +   S  D+ S +
Sbjct: 200 KESWSNKDDPSCA 212


>Medtr4g028060.1 | cyclin p4 | HC | chr4:9659806-9657678 | 20130731
          Length = 218

 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 3/176 (1%)

Query: 28  NLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIY 87
           N P V+ VL+S++E+ +AR + +  +      V    S   F     P ++I  YLERI+
Sbjct: 27  NTPLVINVLASLIERNMARAQRI--VKNCSSRVLSKASTKIFDCREIPDLTIQSYLERIF 84

Query: 88  KYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYA 147
           +YT   PS +VV YVYIDR    +    + S NVHRLL+T++MVASK ++D ++ N+ +A
Sbjct: 85  RYTRAGPSVYVVAYVYIDRFCQNNLGFRINSRNVHRLLITTIMVASKYVEDMNFRNSYFA 144

Query: 148 RVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERAL 203
           +VGG++               +F++ V    FESYC HLE+E+ + G G  IER L
Sbjct: 145 KVGGLTTSELNELELEFLFMMNFKLHVNVSVFESYCSHLEREVSIGG-GYHIERTL 199