Miyakogusa Predicted Gene

Lj3g3v1307390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1307390.1 Non Characterized Hit- tr|H3F941|H3F941_PRIPA
Uncharacterized protein OS=Pristionchus pacificus GN=W,56.25,3e-19,no
description,Aconitase/3-isopropylmalate dehydratase, swivel;
LeuD/IlvD-like,Aconitase/3-isopropyl,gene.g47166.t1.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g088360.1 | cytoplasmic-like aconitate hydratase | HC | ch...   165   1e-41
Medtr4g048190.1 | cytoplasmic-like aconitate hydratase | HC | ch...   156   4e-39
Medtr2g067620.1 | cytoplasmic-like aconitate hydratase | HC | ch...   150   2e-37
Medtr5g022940.2 | cytoplasmic-like aconitate hydratase | HC | ch...   150   3e-37
Medtr5g022940.1 | cytoplasmic-like aconitate hydratase | HC | ch...   150   3e-37
Medtr1g075520.1 | cytoplasmic-like aconitate hydratase | HC | ch...   123   4e-29

>Medtr2g088360.1 | cytoplasmic-like aconitate hydratase | HC |
           chr2:37230917-37240757 | 20130731
          Length = 979

 Score =  165 bits (417), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/83 (87%), Positives = 79/83 (95%)

Query: 1   MGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDT 60
           MGIIPLCFKSGEDADTLGLTGHER++IDLPN ISEI+PGQDVTV TD+GKSFTCT RFDT
Sbjct: 897 MGIIPLCFKSGEDADTLGLTGHERYTIDLPNKISEIKPGQDVTVTTDTGKSFTCTARFDT 956

Query: 61  EVELEYFNHGGILPYVIRNLTRQ 83
           EVELEYFNHGGILPYVIRNL ++
Sbjct: 957 EVELEYFNHGGILPYVIRNLIKK 979


>Medtr4g048190.1 | cytoplasmic-like aconitate hydratase | HC |
           chr4:17044934-17035507 | 20130731
          Length = 979

 Score =  156 bits (394), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 70/83 (84%), Positives = 75/83 (90%)

Query: 1   MGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDT 60
           MGIIPLC+K GEDADTLGLTGHERF+IDLP+ ISEI+PGQDV V TDSGKSFTC  RFDT
Sbjct: 897 MGIIPLCYKPGEDADTLGLTGHERFTIDLPSKISEIKPGQDVKVTTDSGKSFTCIARFDT 956

Query: 61  EVELEYFNHGGILPYVIRNLTRQ 83
           EVEL YFNHGGILPYVIRNL +Q
Sbjct: 957 EVELAYFNHGGILPYVIRNLIKQ 979


>Medtr2g067620.1 | cytoplasmic-like aconitate hydratase | HC |
           chr2:28312952-28303191 | 20130731
          Length = 865

 Score =  150 bits (380), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/113 (64%), Positives = 79/113 (69%), Gaps = 30/113 (26%)

Query: 1   MGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDT 60
           MGIIPLCFKSGEDADTLGLTGHER++IDLPN ISEI+PGQDVTV TD+GKSFTCT RFDT
Sbjct: 753 MGIIPLCFKSGEDADTLGLTGHERYTIDLPNKISEIKPGQDVTVTTDTGKSFTCTARFDT 812

Query: 61  E------------------------------VELEYFNHGGILPYVIRNLTRQ 83
           E                              VELEYFNHGGILPYVIRNL ++
Sbjct: 813 EDRAFIQHFEKLVSEIYIFPCASLLTCPYFQVELEYFNHGGILPYVIRNLIKK 865


>Medtr5g022940.2 | cytoplasmic-like aconitate hydratase | HC |
           chr5:9092237-9099824 | 20130731
          Length = 797

 Score =  150 bits (378), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/80 (81%), Positives = 76/80 (95%)

Query: 1   MGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDT 60
           MGIIPLCFKSGEDADTLGLTGHER++IDLP++++EIRPGQD+TV TD+GK+F+CT+RFDT
Sbjct: 713 MGIIPLCFKSGEDADTLGLTGHERYTIDLPSSVNEIRPGQDITVVTDNGKTFSCTLRFDT 772

Query: 61  EVELEYFNHGGILPYVIRNL 80
           EVEL YFNHGGIL Y IRNL
Sbjct: 773 EVELAYFNHGGILQYAIRNL 792


>Medtr5g022940.1 | cytoplasmic-like aconitate hydratase | HC |
           chr5:9092197-9099891 | 20130731
          Length = 901

 Score =  150 bits (378), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/80 (81%), Positives = 76/80 (95%)

Query: 1   MGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDT 60
           MGIIPLCFKSGEDADTLGLTGHER++IDLP++++EIRPGQD+TV TD+GK+F+CT+RFDT
Sbjct: 817 MGIIPLCFKSGEDADTLGLTGHERYTIDLPSSVNEIRPGQDITVVTDNGKTFSCTLRFDT 876

Query: 61  EVELEYFNHGGILPYVIRNL 80
           EVEL YFNHGGIL Y IRNL
Sbjct: 877 EVELAYFNHGGILQYAIRNL 896


>Medtr1g075520.1 | cytoplasmic-like aconitate hydratase | HC |
           chr1:33443587-33449043 | 20130731
          Length = 895

 Score =  123 bits (308), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/83 (68%), Positives = 67/83 (80%)

Query: 1   MGIIPLCFKSGEDADTLGLTGHERFSIDLPNNISEIRPGQDVTVRTDSGKSFTCTVRFDT 60
           MGIIPL FKSG+DA+TL LTG ERF++DLP  +++I PGQDV V TDSGKSFTC +  DT
Sbjct: 813 MGIIPLRFKSGDDAETLQLTGLERFTVDLPERVNDIEPGQDVNVTTDSGKSFTCKLCLDT 872

Query: 61  EVELEYFNHGGILPYVIRNLTRQ 83
            VEL Y +HGGILPYVIR L +Q
Sbjct: 873 RVELAYIDHGGILPYVIRILIKQ 895