Miyakogusa Predicted Gene
- Lj3g3v1296990.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1296990.2 tr|F2CPY5|F2CPY5_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,77.59,4e-18,Ring finger,Zinc finger, RING-type; ZF_RING_2,Zinc
finger, RING-type; seg,NULL; zf-RING_2,Zinc finge,CUFF.42419.2
(392 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g087820.1 | E3 ubiquitin-protein ligase RHF2A-like protein... 582 e-166
Medtr2g087820.2 | E3 ubiquitin-protein ligase RHF2A-like protein... 578 e-165
Medtr7g106770.1 | E3 ubiquitin-protein ligase RHF2A-like protein... 270 1e-72
Medtr2g022680.1 | E3 ubiquitin-protein ligase RHF2A, putative | ... 192 5e-49
Medtr2g022680.2 | E3 ubiquitin-protein ligase RHF2A, putative | ... 192 5e-49
Medtr2g022680.3 | E3 ubiquitin-protein ligase RHF2A, putative | ... 168 8e-42
Medtr7g016840.2 | RING-finger ubiquitin ligase | HC | chr7:53203... 65 1e-10
Medtr7g016840.1 | RING-finger ubiquitin ligase | HC | chr7:53196... 65 1e-10
Medtr8g030510.1 | anaphase-promoting complex subunit 11 RING-H2 ... 60 2e-09
Medtr8g030510.2 | anaphase-promoting complex subunit 11 RING-H2 ... 60 2e-09
Medtr6g015980.1 | RING-finger ubiquitin ligase | HC | chr6:56670... 60 3e-09
Medtr8g098665.2 | anaphase-promoting complex subunit 11 RING-H2 ... 60 5e-09
Medtr8g098665.1 | anaphase-promoting complex subunit 11 RING-H2 ... 60 5e-09
Medtr6g087150.1 | RING-H2 finger protein ATL4J | HC | chr6:33511... 55 2e-07
Medtr4g080750.1 | anaphase-promoting complex subunit 11 RING-H2 ... 54 2e-07
Medtr5g046970.1 | anaphase-promoting complex subunit 11 RING-H2 ... 54 3e-07
Medtr2g076290.1 | zinc finger, C3HC4 type (RING finger) protein ... 54 4e-07
Medtr3g025940.1 | zinc finger, C3HC4 type (RING finger) protein ... 52 7e-07
Medtr1g114240.2 | RING-finger ubiquitin ligase | HC | chr1:51552... 52 8e-07
Medtr1g114240.1 | RING-finger ubiquitin ligase | HC | chr1:51552... 52 9e-07
Medtr7g092960.1 | anaphase-promoting complex subunit 11 RING-H2 ... 51 2e-06
Medtr3g114500.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 2e-06
Medtr2g078440.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 2e-06
Medtr3g083480.2 | zinc finger, C3HC4 type (RING finger) protein ... 50 3e-06
Medtr3g083480.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 3e-06
Medtr6g048000.1 | anaphase-promoting complex subunit 11 RING-H2 ... 50 3e-06
Medtr5g079050.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 4e-06
Medtr5g078900.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 5e-06
Medtr2g078450.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 6e-06
Medtr2g078450.2 | zinc finger, C3HC4 type (RING finger) protein ... 49 6e-06
Medtr5g066250.1 | RING-H2 zinc finger protein | LC | chr5:279404... 49 8e-06
Medtr1g070140.1 | RING-H2 zinc finger protein | HC | chr1:308110... 49 1e-05
>Medtr2g087820.1 | E3 ubiquitin-protein ligase RHF2A-like protein |
HC | chr2:36962423-36958700 | 20130731
Length = 382
Score = 582 bits (1500), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/392 (74%), Positives = 311/392 (79%), Gaps = 13/392 (3%)
Query: 2 EVPVMEENETTKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHL 61
EVPV+EENET KSEAHLTSAAAFVEGGIQDACDD+CSICLE+F DS+PSTVT CKHEFHL
Sbjct: 3 EVPVIEENET-KSEAHLTSAAAFVEGGIQDACDDSCSICLEEFIDSDPSTVTSCKHEFHL 61
Query: 62 QCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAIFHHPTLGDFE 121
QCILEWCQRSSQCPMCWQ ISLKDPT QELLEAVERERN+RFNP+RNA IFHHPTLGDFE
Sbjct: 62 QCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATIFHHPTLGDFE 121
Query: 122 LQHLPVGANDADLEERIIQHLXXXXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTHXXX 181
LQHLPVGANDADLEERI+QH EGQRNRSSAQGRPQ++VFS H
Sbjct: 122 LQHLPVGANDADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQYMVFSAHPNS 181
Query: 182 XXXXXXXXXLNQRGDGEPAPAVAVATLSQTPATGEESPQLTLVPPVQADQVPVLGSGSAA 241
QRGDGE QTPATGEE PQLTLVPPVQ DQV GSGSAA
Sbjct: 182 PPMAPASSSPPQRGDGE-----------QTPATGEEPPQLTLVPPVQTDQVSASGSGSAA 230
Query: 242 LVADNQGSSYIXXXXXXXXXXXXXDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTRG 301
L DN G SY DRAGPSELQSFSESLKSKLNAVSTRYK+SISKSTRG
Sbjct: 231 LATDNLGLSYNSRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRG 290
Query: 302 WKERWFSRNTSMSDLGSEVRREVNAGIATVSRMMERLETRD-NRSSSNSAPTNLEDGSVQ 360
WKERWFSR + MSDLGSEV+REVNAGIATVSRMMERLETRD NRSSS++AP+NL DG +Q
Sbjct: 291 WKERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAPSNLADGPIQ 350
Query: 361 GSNDQHLTDTEVDGLVRDNNTKASCAAGSSSN 392
GS+DQHLTDTE D +RDNN+K SC AGSSSN
Sbjct: 351 GSSDQHLTDTERDSPLRDNNSKTSCTAGSSSN 382
>Medtr2g087820.2 | E3 ubiquitin-protein ligase RHF2A-like protein |
HC | chr2:36962365-36958768 | 20130731
Length = 383
Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/393 (74%), Positives = 311/393 (79%), Gaps = 14/393 (3%)
Query: 2 EVPVMEENETTKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHL 61
EVPV+EENET KSEAHLTSAAAFVEGGIQDACDD+CSICLE+F DS+PSTVT CKHEFHL
Sbjct: 3 EVPVIEENET-KSEAHLTSAAAFVEGGIQDACDDSCSICLEEFIDSDPSTVTSCKHEFHL 61
Query: 62 QCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAIFHHPTLGDFE 121
QCILEWCQRSSQCPMCWQ ISLKDPT QELLEAVERERN+RFNP+RNA IFHHPTLGDFE
Sbjct: 62 QCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATIFHHPTLGDFE 121
Query: 122 LQHLPVGANDADLEERIIQHLXXXXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTHXXX 181
LQHLPVGANDADLEERI+QH EGQRNRSSAQGRPQ++VFS H
Sbjct: 122 LQHLPVGANDADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQYMVFSAHPNS 181
Query: 182 XXXXXXXXXLNQRGDGEPAPAVAVATLSQTPATGEESPQLTLVPPVQADQVPVLGSGSAA 241
QRGDGE QTPATGEE PQLTLVPPVQ DQV GSGSAA
Sbjct: 182 PPMAPASSSPPQRGDGE-----------QTPATGEEPPQLTLVPPVQTDQVSASGSGSAA 230
Query: 242 LVADNQGSSY-IXXXXXXXXXXXXXDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTR 300
L DN G SY DRAGPSELQSFSESLKSKLNAVSTRYK+SISKSTR
Sbjct: 231 LATDNLGLSYNSSRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTR 290
Query: 301 GWKERWFSRNTSMSDLGSEVRREVNAGIATVSRMMERLETRD-NRSSSNSAPTNLEDGSV 359
GWKERWFSR + MSDLGSEV+REVNAGIATVSRMMERLETRD NRSSS++AP+NL DG +
Sbjct: 291 GWKERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAPSNLADGPI 350
Query: 360 QGSNDQHLTDTEVDGLVRDNNTKASCAAGSSSN 392
QGS+DQHLTDTE D +RDNN+K SC AGSSSN
Sbjct: 351 QGSSDQHLTDTERDSPLRDNNSKTSCTAGSSSN 383
>Medtr7g106770.1 | E3 ubiquitin-protein ligase RHF2A-like protein |
HC | chr7:43487788-43486082 | 20130731
Length = 290
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 182/311 (58%), Gaps = 30/311 (9%)
Query: 12 TKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRS 71
T +E H+TSAAAFVEGGIQ++CDDAC ICLE+FCD++PST T C+HEFHLQC+LEW QRS
Sbjct: 9 TNAENHMTSAAAFVEGGIQESCDDACCICLEEFCDNDPSTATACRHEFHLQCVLEWGQRS 68
Query: 72 SQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAIFHHPTLGDFELQHLPVGAND 131
SQCPMCWQPISLKDPT QEL EAVE+ER R PSRN IFH PTLG F QHL +G N
Sbjct: 69 SQCPMCWQPISLKDPTGQELFEAVEQERKWRVTPSRNIDIFHSPTLGGFGFQHLHMGVNG 128
Query: 132 ADLEERIIQHLXXXXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTHXXXXXXXXXXXXL 191
+ LEER++Q+L EGQ+ R S R L
Sbjct: 129 SSLEERLLQNLAIVASIGRTHHVGRREGQQIRPSGHEREDNL------------------ 170
Query: 192 NQRGDGEPAPAVAVATLSQTPATGEESPQLTLVPPVQADQVPVLGSGSAALVADNQGSSY 251
A+ +++ S TP T E L + Q + S S ++Q +
Sbjct: 171 ---------NAIHMSSQS-TPITSSEDEPLQQILKRQTEGSST--SRSTVTETNDQETYS 218
Query: 252 IXXXXXXXXXXXXXDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTRGWKERWFSRNT 311
+R SE SFS++L+SKLNAVS RYK+SIS TRGWKER FSR++
Sbjct: 219 NDRDCVANSSPINQNRERSSEFHSFSDTLRSKLNAVSMRYKESISNGTRGWKERLFSRSS 278
Query: 312 SMSDLGSEVRR 322
+MS+ GS R+
Sbjct: 279 TMSEFGSNSRK 289
>Medtr2g022680.1 | E3 ubiquitin-protein ligase RHF2A, putative | HC
| chr2:7872724-7868674 | 20130731
Length = 381
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 179/357 (50%), Gaps = 57/357 (15%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLE 93
+D+CSICLE F +PSTVT CKHE+HL CILEW QRS +CP+CWQ +SLKDP QELL+
Sbjct: 35 EDSCSICLESFSVHDPSTVTCCKHEYHLHCILEWSQRSKECPICWQSLSLKDPACQELLD 94
Query: 94 AVERERNVRFNPSRNAAIFHHPTLGDFELQHLPVG---------ANDADLEERIIQHLXX 144
AVE E+++R SRN H P+L + +P G +++ D +E I+QHL
Sbjct: 95 AVEAEKSLR---SRNN---HSPSLAN---SRVPFGYSNGDHDDSSDEIDFDEEIMQHLYA 145
Query: 145 XXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTHXXXXXXXXXXXXLNQRGDGEPAPAVA 204
+G SS G + LVF++ P
Sbjct: 146 AASRARFVQRQRRQG----SSGAGPSEILVFNSS---------------------GPVSG 180
Query: 205 V-ATLSQTPATGEESPQLTLVPPVQADQVPVLGSGSAALVADNQGSSYIXXXXXXXXXXX 263
+ +TL+ +PA G SP L P A+ P + ++ V Y
Sbjct: 181 MQSTLTTSPAGG-SSPTTDL--PSTANARPEVARNTSPEV----DVPYRPRVLYSPSPPQ 233
Query: 264 XXDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTRGWKERWFSRNTSMSDLGSEVRRE 323
+ SE+ SF ES KSK +A S RYK+SISKSTRG KE+ +RN ++ +L V+RE
Sbjct: 234 DERKLNTSEMFSFPESFKSKFSAASARYKESISKSTRGLKEKLLARNVTVKELSKGVQRE 293
Query: 324 VNAGIATVSRMMERLETRDNRSSS------NSAPTNLEDGSVQGSNDQHLTDTEVDG 374
+NAGIA VSRM+ERL+ RS S N + +G D + TE G
Sbjct: 294 MNAGIAGVSRMIERLDLASKRSGSPLIPVRNGGTSGFSEGKSVEEKDTGNSKTEASG 350
>Medtr2g022680.2 | E3 ubiquitin-protein ligase RHF2A, putative | HC
| chr2:7872684-7868741 | 20130731
Length = 388
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 179/356 (50%), Gaps = 55/356 (15%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLE 93
+D+CSICLE F +PSTVT CKHE+HL CILEW QRS +CP+CWQ +SLKDP QELL+
Sbjct: 35 EDSCSICLESFSVHDPSTVTCCKHEYHLHCILEWSQRSKECPICWQSLSLKDPACQELLD 94
Query: 94 AVERERNVRFNPSRNAAIFHHPTLGDFELQHLPVG---------ANDADLEERIIQHLXX 144
AVE E+++R SRN H P+L + +P G +++ D +E I+QHL
Sbjct: 95 AVEAEKSLR---SRNN---HSPSLAN---SRVPFGYSNGDHDDSSDEIDFDEEIMQHLYA 145
Query: 145 XXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTHXXXXXXXXXXXXLNQRGDGEPAPAVA 204
+G SS G + LVF N G P +
Sbjct: 146 AASRARFVQRQRRQG----SSGAGPSEILVF----------------NSSG---PVSGMQ 182
Query: 205 VATLSQTPATGEESPQLTLVPPVQADQVPVLGSGSAALVADNQGSSYIXXXXXXXXXXXX 264
+TL+ +PA G SP L P A+ P + ++ V Y
Sbjct: 183 -STLTTSPAGG-SSPTTDL--PSTANARPEVARNTSPEV----DVPYRPRVLYSPSPPQD 234
Query: 265 XDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTRGWKERWFSRNTSMSDLGSEVRREV 324
+ SE+ SF ES KSK +A S RYK+SISKSTRG KE+ +RN ++ +L V+RE+
Sbjct: 235 ERKLNTSEMFSFPESFKSKFSAASARYKESISKSTRGLKEKLLARNVTVKELSKGVQREM 294
Query: 325 NAGIATVSRMMERLETRDNRSSS------NSAPTNLEDGSVQGSNDQHLTDTEVDG 374
NAGIA VSRM+ERL+ RS S N + +G D + TE G
Sbjct: 295 NAGIAGVSRMIERLDLASKRSGSPLIPVRNGGTSGFSEGKSVEEKDTGNSKTEASG 350
>Medtr2g022680.3 | E3 ubiquitin-protein ligase RHF2A, putative | HC
| chr2:7872724-7868698 | 20130731
Length = 336
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 165/339 (48%), Gaps = 57/339 (16%)
Query: 52 VTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAI 111
VT CKHE+HL CILEW QRS +CP+CWQ +SLKDP QELL+AVE E+++R SRN
Sbjct: 8 VTCCKHEYHLHCILEWSQRSKECPICWQSLSLKDPACQELLDAVEAEKSLR---SRNN-- 62
Query: 112 FHHPTLGDFELQHLPVG---------ANDADLEERIIQHLXXXXXXXXXXXXXXXEGQRN 162
H P+L + +P G +++ D +E I+QHL +G
Sbjct: 63 -HSPSLAN---SRVPFGYSNGDHDDSSDEIDFDEEIMQHLYAAASRARFVQRQRRQG--- 115
Query: 163 RSSAQGRPQFLVFSTHXXXXXXXXXXXXLNQRGDGEPAPAVAV-ATLSQTPATGEESPQL 221
SS G + LVF++ P + +TL+ +PA G SP
Sbjct: 116 -SSGAGPSEILVFNSS---------------------GPVSGMQSTLTTSPAGG-SSPTT 152
Query: 222 TLVPPVQADQVPVLGSGSAALVADNQGSSYIXXXXXXXXXXXXXDRAGPSELQSFSESLK 281
L P A+ P + ++ V Y + SE+ SF ES K
Sbjct: 153 DL--PSTANARPEVARNTSPEV----DVPYRPRVLYSPSPPQDERKLNTSEMFSFPESFK 206
Query: 282 SKLNAVSTRYKDSISKSTRGWKERWFSRNTSMSDLGSEVRREVNAGIATVSRMMERLETR 341
SK +A S RYK+SISKSTRG KE+ +RN ++ +L V+RE+NAGIA VSRM+ERL+
Sbjct: 207 SKFSAASARYKESISKSTRGLKEKLLARNVTVKELSKGVQREMNAGIAGVSRMIERLDLA 266
Query: 342 DNRSSS------NSAPTNLEDGSVQGSNDQHLTDTEVDG 374
RS S N + +G D + TE G
Sbjct: 267 SKRSGSPLIPVRNGGTSGFSEGKSVEEKDTGNSKTEASG 305
>Medtr7g016840.2 | RING-finger ubiquitin ligase | HC |
chr7:5320372-5324813 | 20130731
Length = 227
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 14 SEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQ 73
S A LT+ AA V ++ +D C CLE++ + P VT C H +HL CI EW +RS
Sbjct: 156 SSAKLTTGAALVYASSEE--EDVCPTCLEEYTEENPKIVTKCNHHYHLGCIYEWMERSDS 213
Query: 74 CPMC 77
CP+C
Sbjct: 214 CPVC 217
>Medtr7g016840.1 | RING-finger ubiquitin ligase | HC |
chr7:5319678-5324820 | 20130731
Length = 227
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 14 SEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQ 73
S A LT+ AA V ++ +D C CLE++ + P VT C H +HL CI EW +RS
Sbjct: 156 SSAKLTTGAALVYASSEE--EDVCPTCLEEYTEENPKIVTKCNHHYHLGCIYEWMERSDS 213
Query: 74 CPMC 77
CP+C
Sbjct: 214 CPVC 217
>Medtr8g030510.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr8:11202384-11208450 | 20130731
Length = 191
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQ 79
+D C ICLE++ P T++ C+H FHL CILEW +RS CP+C Q
Sbjct: 137 EDGCPICLEEYDVENPKTLSKCEHHFHLACILEWMERSDSCPICDQ 182
>Medtr8g030510.2 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr8:11202384-11208450 | 20130731
Length = 191
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQ 79
+D C ICLE++ P T++ C+H FHL CILEW +RS CP+C Q
Sbjct: 137 EDGCPICLEEYDVENPKTLSKCEHHFHLACILEWMERSDSCPICDQ 182
>Medtr6g015980.1 | RING-finger ubiquitin ligase | HC |
chr6:5667096-5661021 | 20130731
Length = 229
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 14 SEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQ 73
S A T+ + +D +D C CLE++ P +T C H FHL CI EW +RS
Sbjct: 156 SSAKYTTGVGLIYASSED--EDICPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDN 213
Query: 74 CPMCWQPISLKDPT 87
CP+C + + + T
Sbjct: 214 CPVCGKEMDFDETT 227
>Medtr8g098665.2 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr8:41188446-41185266 | 20130731
Length = 207
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQ 79
+D C ICLE++ P T C H+FHL CILEW +RS CP+C Q
Sbjct: 153 EDTCPICLEEYDAENPKLTTQCGHDFHLACILEWMERSETCPVCDQ 198
>Medtr8g098665.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr8:41188349-41185397 | 20130731
Length = 207
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQ 79
+D C ICLE++ P T C H+FHL CILEW +RS CP+C Q
Sbjct: 153 EDTCPICLEEYDAENPKLTTQCGHDFHLACILEWMERSETCPVCDQ 198
>Medtr6g087150.1 | RING-H2 finger protein ATL4J | HC |
chr6:33511896-33513722 | 20130731
Length = 376
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 37 CSICLEDFCDSEPSTVT-GCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTS 88
CSICL F D E + CKH FH+ CI W ++ S CP+C ++++D T+
Sbjct: 119 CSICLSKFEDIEILRLLPKCKHAFHIDCIDHWLEKHSSCPICRHKVNIEDQTT 171
>Medtr4g080750.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr4:31202353-31200442 | 20130731
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 20 SAAAFVEGGIQDACDDA--CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
+AA ++ +++ +D C+ICLEDF E +T C H FH CI+ W QCP+C
Sbjct: 166 NAANDLKESVKEKTEDGMRCAICLEDFEAKEEVMLTPCNHMFHEDCIVTWLTSKGQCPVC 225
>Medtr5g046970.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | LC | chr5:20590994-20589496 | 20130731
Length = 160
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 35 DACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLK 84
D C IC ED+ D P T C H +HL CI EW S CP+C Q +L+
Sbjct: 82 DNCLICFEDYTDENPKIATRCCHHYHLSCIYEWMSMSKTCPVCRQVRNLQ 131
>Medtr2g076290.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:31952399-31950543 | 20130731
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 35 DACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
D+C+IC +F D E + CKHE+H++CI W ++CP+C
Sbjct: 282 DSCTICQTEFEDHEKIGILQCKHEYHVECIQNWLVIKNECPIC 324
>Medtr3g025940.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr3:7918725-7915603 | 20130731
Length = 454
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
+ C+IC EDF D E C H +HL CI +W + + CP+C
Sbjct: 397 NQTCTICQEDFVDGESIGRLNCIHVYHLHCIKQWLEMRNACPIC 440
>Medtr1g114240.2 | RING-finger ubiquitin ligase | HC |
chr1:51552982-51559455 | 20130731
Length = 339
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 24 FVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPIS 82
+ G Q +D+C IC D+ D E TV CKH +H +CI W + + CP+C +S
Sbjct: 275 YKAGSDQLGSNDSCVICRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVS 333
>Medtr1g114240.1 | RING-finger ubiquitin ligase | HC |
chr1:51552982-51559455 | 20130731
Length = 333
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 24 FVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPIS 82
+ G Q +D+C IC D+ D E TV CKH +H +CI W + + CP+C +S
Sbjct: 269 YKAGSDQLGSNDSCVICRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVS 327
>Medtr7g092960.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | LC | chr7:36904636-36904331 | 20130731
Length = 101
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 35 DACSICLEDFCDSEPS--TVTGCKHEFHLQCILEWCQRSSQCPMC 77
D CSICLE+ S +T C H FH +CI +W +RS CP+C
Sbjct: 51 DQCSICLEELFKGSKSECVMTECLHVFHKECIFQWFKRSLTCPLC 95
>Medtr3g114500.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:53462414-53463320 | 20130731
Length = 127
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 37 CSICLEDFCDSEPSTV-TGCKHEFHLQCILEWCQRSSQCPMC 77
C++CL+D D +P+ + GC H FHLQC W + CP+C
Sbjct: 71 CAVCLDDIVDEQPARLLPGCNHAFHLQCADTWLSKHPMCPLC 112
>Medtr2g078440.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:32685859-32684289 | 20130731
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 35 DACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
DAC IC E+F E + CKH +H+ CI++W + CP+C
Sbjct: 251 DACMICQEEFKIQEKIGILQCKHGYHVDCIIKWLMIKNICPIC 293
>Medtr3g083480.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:37658587-37660828 | 20130731
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 37 CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 86
CS+CL+DF + CKH FH CIL W + S CP+C + + +P
Sbjct: 237 CSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEP 286
>Medtr3g083480.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:37658323-37660828 | 20130731
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 37 CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 86
CS+CL+DF + CKH FH CIL W + S CP+C + + +P
Sbjct: 237 CSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEP 286
>Medtr6g048000.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | LC | chr6:17313323-17312985 | 20130731
Length = 112
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 34 DDACSICLEDFCDSEPSTVTG------------CKHEFHLQCILEWCQRSSQCPMCWQPI 81
DD CSIC+EDF +S S V G C H +H CI EW R + CP+C I
Sbjct: 51 DDVCSICMEDFEESHNSEVGGNSLFRVSNRRVPCGHVYHSNCIAEWLDRCNSCPLCRHHI 110
Query: 82 S 82
S
Sbjct: 111 S 111
>Medtr5g079050.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:33803352-33800426 | 20130731
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
+ C+IC EDF D E C H +HL CI +W + + CP+C
Sbjct: 310 NQTCTICQEDFIDGECIGRLDCNHIYHLNCIKQWLEEKNVCPIC 353
>Medtr5g078900.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:33731973-33729291 | 20130731
Length = 378
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 34 DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
+ C+IC EDF D E C H +HL CI +W + + CP+C
Sbjct: 310 NQTCTICQEDFIDGECIGRFDCNHIYHLNCIKQWLEEKNVCPIC 353
>Medtr2g078450.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:32697439-32693328 | 20130731
Length = 523
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 13 KSEAHLTSAA--AFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQR 70
KS+ + T A E D D+C IC E+F + E + C+HE+H +C+ +W
Sbjct: 445 KSKVYSTKATDINLEEAASDDQESDSCIICQEEFKNKEKIGILRCEHEYHAECLTKWLLV 504
Query: 71 SSQCPMC 77
+ CP+C
Sbjct: 505 KNVCPIC 511
>Medtr2g078450.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:32697401-32693397 | 20130731
Length = 523
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 13 KSEAHLTSAA--AFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQR 70
KS+ + T A E D D+C IC E+F + E + C+HE+H +C+ +W
Sbjct: 445 KSKVYSTKATDINLEEAASDDQESDSCIICQEEFKNKEKIGILRCEHEYHAECLTKWLLV 504
Query: 71 SSQCPMC 77
+ CP+C
Sbjct: 505 KNVCPIC 511
>Medtr5g066250.1 | RING-H2 zinc finger protein | LC |
chr5:27940400-27939099 | 20130731
Length = 433
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 37 CSICLEDFCDSEP-STVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKD-------PTS 88
C++CL F D + + CKH FH++C+ W S CP+C ++ D T
Sbjct: 160 CAVCLNGFEDPDVLRLLPKCKHAFHMECVDMWLDEHSSCPLCRYKVNPDDIVLPQRQNTE 219
Query: 89 QELLEA-VERERNVRFN 104
+ELL + +ER NV N
Sbjct: 220 EELLSSNIERGNNVNDN 236
>Medtr1g070140.1 | RING-H2 zinc finger protein | HC |
chr1:30811056-30812078 | 20130731
Length = 340
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 24 FVEGGIQDACDDACSICLEDFCDSEPSTVT-GCKHEFHLQCILEWCQRSSQCPMCWQPIS 82
F++G +D C +CL +F + + + C H FHL CI W Q +S CP+C IS
Sbjct: 117 FIKGECEDQSVYGCVVCLTEFQEQDVIKILPNCNHAFHLDCIDIWLQTNSNCPLCRSSIS 176