Miyakogusa Predicted Gene
- Lj3g3v1295850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1295850.1 tr|Q55GJ4|Q55GJ4_DICDI Sec20 family protein
OS=Dictyostelium discoideum GN=sec20 PE=4
SV=1,31.48,3e-16,Sec20,Sec20; SUBFAMILY NOT NAMED,NULL;
BNIP1-RELATED,NULL; seg,NULL,CUFF.42411.1
(292 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g028660.1 | vesicle transporter Sec20, putative | HC | chr... 429 e-120
Medtr2g028660.2 | vesicle transporter Sec20, putative | HC | chr... 417 e-117
>Medtr2g028660.1 | vesicle transporter Sec20, putative | HC |
chr2:10627176-10632598 | 20130731
Length = 292
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/292 (74%), Positives = 239/292 (81%)
Query: 1 MDXXXXXXXXXXREWDEACGKTQLHIKAIADYGKSGRPKDEINSLARLNGMAQDGXXXXX 60
MD +EW+E C KTQ HI AI +YGKSGR KDE NSLARLNG+AQDG
Sbjct: 1 MDKVVEEVERVKKEWNETCIKTQDHINAIGEYGKSGRSKDEKNSLARLNGIAQDGLALLS 60
Query: 61 XXXXXXXXXXPQLPTEKEVESARVLLESWKTLSQHLRLSLRNANLQAKANLRKAAQXXXX 120
PQLPT++EV+SAR LL+SWKTL+Q+LR+SLRNANLQAKANLRKAAQ
Sbjct: 61 SLHFNLDLLAPQLPTQQEVDSARQLLQSWKTLTQNLRISLRNANLQAKANLRKAAQEERE 120
Query: 121 XXXXXXXXSTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERNTSTLMTLDESTGV 180
ST+RRRNLQTKAGMTSAAESIT+SLRRTRQLMVQEVERNTSTLMTLDESTGV
Sbjct: 121 LLLGGGEESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGV 180
Query: 181 LKKAESEYKGHRSLLMRTRNLLSTMQRQDVIDRVIIGLGFLLFSLAVLYVVSKRIGLLTL 240
LKKAESEYKGHRSLL RTRNLLSTMQRQD+IDRVI+G+GFLLFSLAVLYVVSKRIG+LTL
Sbjct: 181 LKKAESEYKGHRSLLTRTRNLLSTMQRQDIIDRVILGVGFLLFSLAVLYVVSKRIGILTL 240
Query: 241 QRKVTEAIKAGVVGQADLRPQAVADDMNLHQVRDDHVHNTEAPLEQRIHDEL 292
QRKVT AIKAG++GQA LRPQAVA++MN HQ R D VHN EAPLEQ+IHDEL
Sbjct: 241 QRKVTGAIKAGMMGQAGLRPQAVAENMNPHQARVDRVHNIEAPLEQQIHDEL 292
>Medtr2g028660.2 | vesicle transporter Sec20, putative | HC |
chr2:10627176-10632595 | 20130731
Length = 310
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/310 (70%), Positives = 239/310 (77%), Gaps = 18/310 (5%)
Query: 1 MDXXXXXXXXXXREWDEACGKTQLHIKAIADYGKSGRPKDEINSLARLNGMAQDGXXXXX 60
MD +EW+E C KTQ HI AI +YGKSGR KDE NSLARLNG+AQDG
Sbjct: 1 MDKVVEEVERVKKEWNETCIKTQDHINAIGEYGKSGRSKDEKNSLARLNGIAQDGLALLS 60
Query: 61 XXXXXXXXXXPQLPTEKEVESARVLLESWKTLSQHLRLSLRNANLQAKANLRKAAQXXXX 120
PQLPT++EV+SAR LL+SWKTL+Q+LR+SLRNANLQAKANLRKAAQ
Sbjct: 61 SLHFNLDLLAPQLPTQQEVDSARQLLQSWKTLTQNLRISLRNANLQAKANLRKAAQEECY 120
Query: 121 XXXXXXX------------------XSTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQ 162
ST+RRRNLQTKAGMTSAAESIT+SLRRTRQLMVQ
Sbjct: 121 WEHLLVTDSEPISYIVRELLLGGGEESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQ 180
Query: 163 EVERNTSTLMTLDESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVIDRVIIGLGFLL 222
EVERNTSTLMTLDESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQD+IDRVI+G+GFLL
Sbjct: 181 EVERNTSTLMTLDESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDIIDRVILGVGFLL 240
Query: 223 FSLAVLYVVSKRIGLLTLQRKVTEAIKAGVVGQADLRPQAVADDMNLHQVRDDHVHNTEA 282
FSLAVLYVVSKRIG+LTLQRKVT AIKAG++GQA LRPQAVA++MN HQ R D VHN EA
Sbjct: 241 FSLAVLYVVSKRIGILTLQRKVTGAIKAGMMGQAGLRPQAVAENMNPHQARVDRVHNIEA 300
Query: 283 PLEQRIHDEL 292
PLEQ+IHDEL
Sbjct: 301 PLEQQIHDEL 310