Miyakogusa Predicted Gene

Lj3g3v1294550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1294550.1 NODE_50713_length_1282_cov_26.011700.path1.1
         (360 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g087590.2 | outer membrane OMP85 family protein | HC | chr...   664   0.0  
Medtr2g087590.1 | outer membrane OMP85 family protein | HC | chr...   664   0.0  
Medtr2g087590.3 | outer membrane OMP85 family protein | HC | chr...   664   0.0  
Medtr1g070230.1 | outer membrane OMP85 family protein | HC | chr...   422   e-118
Medtr2g098110.1 | outer membrane OMP85 family protein | HC | chr...   231   8e-61
Medtr4g064780.1 | translocon at the outer envelope membrane ofs ...    80   3e-15
Medtr2g097700.1 | translocon at the outer envelope membrane ofs ...    73   3e-13
Medtr2g087620.1 | hypothetical protein | LC | chr2:36865228-3686...    71   2e-12
Medtr5g013940.1 | outer membrane OMP85 family protein | LC | chr...    53   5e-07

>Medtr2g087590.2 | outer membrane OMP85 family protein | HC |
           chr2:36848781-36855021 | 20130731
          Length = 360

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/360 (88%), Positives = 336/360 (93%)

Query: 1   MGAQKSIHAGKAKIDVNVDFTHKLCASLMFPTLRSYENPLRLVIGSLCIKHPNLFGGSEK 60
           MGAQKSIHAGKAKIDVNVDFTHKLC  LM  T RS +NPL LVIGSLCIKHPNLFGGSEK
Sbjct: 1   MGAQKSIHAGKAKIDVNVDFTHKLCTYLMLNTFRSDDNPLSLVIGSLCIKHPNLFGGSEK 60

Query: 61  LDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVN 120
           LDVSWDKGLYDSNIL+AYRRPR E  A QSFV+QHSLSPEI +HGIP+NNFSRSGSGGVN
Sbjct: 61  LDVSWDKGLYDSNILIAYRRPREECFAHQSFVVQHSLSPEIGIHGIPVNNFSRSGSGGVN 120

Query: 121 LSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVV 180
           LS+LSVG+DLKEP S+KWSSTTSIKFEHVRPLNDDGR IS D DGF LTCSGS HDSMVV
Sbjct: 121 LSRLSVGMDLKEPASSKWSSTTSIKFEHVRPLNDDGRNISMDRDGFALTCSGSPHDSMVV 180

Query: 181 LKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGG 240
           LKQESR  KAND SFFHFNLQIEQGIPVLSKWI+FNRFKFVA+KG+KLGP  LLTRLTGG
Sbjct: 181 LKQESRHTKANDHSFFHFNLQIEQGIPVLSKWIIFNRFKFVATKGIKLGPTLLLTRLTGG 240

Query: 241 SIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTD 300
           SIVGDMAPYQAFS+GGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIF+DCGTD
Sbjct: 241 SIVGDMAPYQAFSIGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFMDCGTD 300

Query: 301 LRTGHLVPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360
           LRTG+LVPGNPALR GKPGSGVGLGYGLRFKSQFGHFQVDYA+NAF+Q+TLYFGLSNLAS
Sbjct: 301 LRTGYLVPGNPALRHGKPGSGVGLGYGLRFKSQFGHFQVDYAINAFKQRTLYFGLSNLAS 360


>Medtr2g087590.1 | outer membrane OMP85 family protein | HC |
           chr2:36848781-36854045 | 20130731
          Length = 360

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/360 (88%), Positives = 336/360 (93%)

Query: 1   MGAQKSIHAGKAKIDVNVDFTHKLCASLMFPTLRSYENPLRLVIGSLCIKHPNLFGGSEK 60
           MGAQKSIHAGKAKIDVNVDFTHKLC  LM  T RS +NPL LVIGSLCIKHPNLFGGSEK
Sbjct: 1   MGAQKSIHAGKAKIDVNVDFTHKLCTYLMLNTFRSDDNPLSLVIGSLCIKHPNLFGGSEK 60

Query: 61  LDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVN 120
           LDVSWDKGLYDSNIL+AYRRPR E  A QSFV+QHSLSPEI +HGIP+NNFSRSGSGGVN
Sbjct: 61  LDVSWDKGLYDSNILIAYRRPREECFAHQSFVVQHSLSPEIGIHGIPVNNFSRSGSGGVN 120

Query: 121 LSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVV 180
           LS+LSVG+DLKEP S+KWSSTTSIKFEHVRPLNDDGR IS D DGF LTCSGS HDSMVV
Sbjct: 121 LSRLSVGMDLKEPASSKWSSTTSIKFEHVRPLNDDGRNISMDRDGFALTCSGSPHDSMVV 180

Query: 181 LKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGG 240
           LKQESR  KAND SFFHFNLQIEQGIPVLSKWI+FNRFKFVA+KG+KLGP  LLTRLTGG
Sbjct: 181 LKQESRHTKANDHSFFHFNLQIEQGIPVLSKWIIFNRFKFVATKGIKLGPTLLLTRLTGG 240

Query: 241 SIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTD 300
           SIVGDMAPYQAFS+GGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIF+DCGTD
Sbjct: 241 SIVGDMAPYQAFSIGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFMDCGTD 300

Query: 301 LRTGHLVPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360
           LRTG+LVPGNPALR GKPGSGVGLGYGLRFKSQFGHFQVDYA+NAF+Q+TLYFGLSNLAS
Sbjct: 301 LRTGYLVPGNPALRHGKPGSGVGLGYGLRFKSQFGHFQVDYAINAFKQRTLYFGLSNLAS 360


>Medtr2g087590.3 | outer membrane OMP85 family protein | HC |
           chr2:36848781-36854748 | 20130731
          Length = 360

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/360 (88%), Positives = 336/360 (93%)

Query: 1   MGAQKSIHAGKAKIDVNVDFTHKLCASLMFPTLRSYENPLRLVIGSLCIKHPNLFGGSEK 60
           MGAQKSIHAGKAKIDVNVDFTHKLC  LM  T RS +NPL LVIGSLCIKHPNLFGGSEK
Sbjct: 1   MGAQKSIHAGKAKIDVNVDFTHKLCTYLMLNTFRSDDNPLSLVIGSLCIKHPNLFGGSEK 60

Query: 61  LDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVN 120
           LDVSWDKGLYDSNIL+AYRRPR E  A QSFV+QHSLSPEI +HGIP+NNFSRSGSGGVN
Sbjct: 61  LDVSWDKGLYDSNILIAYRRPREECFAHQSFVVQHSLSPEIGIHGIPVNNFSRSGSGGVN 120

Query: 121 LSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVV 180
           LS+LSVG+DLKEP S+KWSSTTSIKFEHVRPLNDDGR IS D DGF LTCSGS HDSMVV
Sbjct: 121 LSRLSVGMDLKEPASSKWSSTTSIKFEHVRPLNDDGRNISMDRDGFALTCSGSPHDSMVV 180

Query: 181 LKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGG 240
           LKQESR  KAND SFFHFNLQIEQGIPVLSKWI+FNRFKFVA+KG+KLGP  LLTRLTGG
Sbjct: 181 LKQESRHTKANDHSFFHFNLQIEQGIPVLSKWIIFNRFKFVATKGIKLGPTLLLTRLTGG 240

Query: 241 SIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTD 300
           SIVGDMAPYQAFS+GGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIF+DCGTD
Sbjct: 241 SIVGDMAPYQAFSIGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFMDCGTD 300

Query: 301 LRTGHLVPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360
           LRTG+LVPGNPALR GKPGSGVGLGYGLRFKSQFGHFQVDYA+NAF+Q+TLYFGLSNLAS
Sbjct: 301 LRTGYLVPGNPALRHGKPGSGVGLGYGLRFKSQFGHFQVDYAINAFKQRTLYFGLSNLAS 360


>Medtr1g070230.1 | outer membrane OMP85 family protein | HC |
           chr1:30940841-30944039 | 20130731
          Length = 353

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/349 (57%), Positives = 256/349 (73%), Gaps = 1/349 (0%)

Query: 12  AKIDVNVDFTHKLCASLMFPTLR-SYENPLRLVIGSLCIKHPNLFGGSEKLDVSWDKGLY 70
           +K D+  +F  KLC   +   LR S  NP  L  GSLC+K   LF  S+ LD+SW KGLY
Sbjct: 4   SKFDIGANFIQKLCDFYVPSPLRISSINPFSLASGSLCVKQRELFHNSDMLDISWHKGLY 63

Query: 71  DSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVNLSKLSVGLDL 130
           DSNIL+ YR P+P  L Q S  +QH +SPE+ +HG+P+NNFS+S S G+ LSKLS+GLD 
Sbjct: 64  DSNILIGYRYPKPICLGQHSLTIQHLISPEVGIHGVPMNNFSQSVSQGLRLSKLSIGLDF 123

Query: 131 KEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVVLKQESRFAKA 190
            EP ++ WS++T + F+H R  ND GR+ISRD DGFPLTCSG  +D+M+V+ Q+++F   
Sbjct: 124 NEPSTSNWSTSTGVYFKHNRFSNDSGRSISRDLDGFPLTCSGEPYDNMIVINQKTQFEDV 183

Query: 191 NDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGGSIVGDMAPYQ 250
           ND SF HF+LQ+EQGIP+    + FNRFKF ASKGVKLGP  L + L+GGSIVG +AP+Q
Sbjct: 184 NDHSFTHFSLQMEQGIPLQPNLLTFNRFKFFASKGVKLGPTVLSSWLSGGSIVGSIAPHQ 243

Query: 251 AFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVPGN 310
           AF++GG  SVRGYGEGAVGSG+S L + +EL +PL K LEG  FLDCG+DL + H VPGN
Sbjct: 244 AFAIGGPNSVRGYGEGAVGSGQSYLASKTELAIPLNKKLEGVFFLDCGSDLNSSHRVPGN 303

Query: 311 PALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLA 359
           P  R GKPGSG G+G G+RFK++    + DYA+NAF Q++LYFG+SNL 
Sbjct: 304 PGHRHGKPGSGYGIGCGIRFKTKLAQIKFDYAINAFHQRSLYFGISNLV 352


>Medtr2g098110.1 | outer membrane OMP85 family protein | HC |
           chr2:41921668-41929992 | 20130731
          Length = 672

 Score =  231 bits (589), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 124/323 (38%), Positives = 190/323 (58%), Gaps = 15/323 (4%)

Query: 39  PLRLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWL------AQQSFV 92
           PLR +IGS    H N+FG ++KL+VS ++G  D  +   Y  P   W+         + +
Sbjct: 355 PLRGLIGSFAYSHRNVFGRNQKLNVSLERGQVDLIVRANYTDP---WIQGDDKRTSGTIM 411

Query: 93  LQHSLSPEIAVHGIPINNFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPL 152
           +Q+S +P   VHG      +  G+  + + +++ G++L  P+  KWS T  + F+     
Sbjct: 412 VQNSRTPGTIVHG------NLDGNSSLTIGRITGGVELSRPIRPKWSGTAGLIFQRAGVC 465

Query: 153 NDDGRAISRDYDGFPLTCSGSTHDSMVVLKQESRFAKANDRSFFHFNLQIEQGIPVLSKW 212
           +++G  I RD    PLT SG+THD  ++ K E+ +  + +     F L +EQG+P+L  W
Sbjct: 466 DNNGVPIIRDRYNSPLTASGNTHDDTLLGKIETVYTGSGEHGSSMFVLNMEQGLPLLPDW 525

Query: 213 ILFNRFKFVASKGVKLGPAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGR 272
           + F R    A KGV++GP  L   L+GG +VG+ +PY+AF++GG  SVRGY EG VGSGR
Sbjct: 526 LSFTRVNARARKGVEIGPTRLNLSLSGGHVVGNFSPYEAFAIGGTNSVRGYEEGGVGSGR 585

Query: 273 SCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVPGNPALRQGKPGSGVGLGYGLRFKS 332
           S +V + E++ P+ K +E  IF D GTDL +G  VPG+PA  + KPGSG G G G+R  S
Sbjct: 586 SYVVGSGEISFPMMKPVECVIFSDYGTDLGSGSTVPGDPAGARNKPGSGYGYGLGIRVDS 645

Query: 333 QFGHFQVDYAVNAFQQKTLYFGL 355
             G  +++YA N  ++K  +FG+
Sbjct: 646 PLGPLRLEYAFNDKKEKRFHFGV 668


>Medtr4g064780.1 | translocon at the outer envelope membrane ofs
           protein 75-III | HC | chr4:24172278-24167585 | 20130731
          Length = 804

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 40/253 (15%)

Query: 110 NFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLT 169
           NFSR        SK + GL ++E ++   ++      + V P       IS   DG P T
Sbjct: 558 NFSRQ-------SKFTYGLVMEEIITRDETNHICSNGQRVLP----NGGIS--ADGPPTT 604

Query: 170 CSGSTHDSMVVL-----KQESRF---AKANDRSFFHFNLQIEQGIPVLSKWILFNRFK-- 219
            SG+  D M  L     +  +RF   A    R+ F    Q++QG+ V S +  FNR +  
Sbjct: 605 LSGTGIDKMAFLQANITRDNTRFVNGAIVGSRNMF----QVDQGLGVGSNFPFFNRHQLT 660

Query: 220 ---FVASKGVKLG-----PAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSG 271
              F+  K V+ G     P  L+     G  VGD+  Y AF++GG  SVRGY  G +G+ 
Sbjct: 661 LTQFLQLKSVEEGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAA 720

Query: 272 RSCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVPGNPALRQGKPGSGVGLGYGLRFK 331
           R+ L   +E+ +P+ K      F + GTDL +   V GNP     + G G   G G++  
Sbjct: 721 RNILELAAEVRIPI-KGTHVYAFAEHGTDLGSSKDVKGNPTEVYRRMGQGSSYGAGMK-- 777

Query: 332 SQFGHFQVDYAVN 344
              G  + +YAV+
Sbjct: 778 --LGLVRAEYAVD 788


>Medtr2g097700.1 | translocon at the outer envelope membrane ofs
           protein 75-III | HC | chr2:41741233-41736806 | 20130731
          Length = 781

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 33/241 (13%)

Query: 122 SKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVVL 181
           SK + GL ++E  +    +      + V P    G  IS   DG P +  G+  D M  L
Sbjct: 540 SKFTYGLVMEEITTRDEGNQICANGQRVLP----GGGIS--ADGPPTSLGGTGIDHMAFL 593

Query: 182 -----KQESRF---AKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKL----- 228
                +  +RF   A    R+ F    Q++QG+ + +++  FNR +   ++ ++L     
Sbjct: 594 QANITRDNTRFVNGAVVGARNMF----QVDQGLGIGTQFPFFNRHQLTLTRFIQLMFVEE 649

Query: 229 -----GPAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTL 283
                 P  L+     G  VGD+  Y AF++GG  SVRGY  G +G+ R+ L   +EL +
Sbjct: 650 GAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRI 709

Query: 284 PLTKMLEGAIFLDCGTDLRTGHLVPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAV 343
           P+ K +    F + G DL +   V GNP     + G G   G G    ++ G  + +YA+
Sbjct: 710 PV-KGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVG----AKLGLVRAEYAI 764

Query: 344 N 344
           +
Sbjct: 765 D 765


>Medtr2g087620.1 | hypothetical protein | LC |
           chr2:36865228-36863247 | 20130731
          Length = 215

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 12/53 (22%)

Query: 308 PGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360
             NPALR GKPGSGVG            HFQVDYA+N F+Q+TLYFGLSNLAS
Sbjct: 175 KSNPALRHGKPGSGVG------------HFQVDYAINEFKQRTLYFGLSNLAS 215


>Medtr5g013940.1 | outer membrane OMP85 family protein | LC |
           chr5:4601883-4601007 | 20130731
          Length = 180

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 189 KANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKL----------GPAFLLTRLT 238
           +     F    L+++QG+ + +++  FNR +   ++ ++L           P  L+    
Sbjct: 9   RTRHLCFLLKTLEVDQGLGIGTQFPFFNRHQLTLARFIQLMSMEKGAGKPPPPVLVLHDR 68

Query: 239 GGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLE 290
            G  VGD+  Y AF++GG  S+RGY  G +G+ R+ L   +E  +P+  M E
Sbjct: 69  YGGCVGDLPIYDAFTLGGPYSLRGYNMGELGTARNMLELAAEFWIPVKGMHE 120