Miyakogusa Predicted Gene

Lj3g3v1294540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1294540.1 tr|A7SKU7|A7SKU7_NEMVE Predicted protein
(Fragment) OS=Nematostella vectensis GN=v1g122036 PE=4
SV=1,37.84,1e-18,seg,NULL; CYTOSINE DEAMINASE-RELATED,NULL; CYTOSINE
DEAMINASE,NULL; no description,NULL;
dCMP_cyt_de,NODE_50471_length_1620_cov_20.938272.path1.1
         (270 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103020.1 | cytidine/deoxycytidylate deaminase family prot...   384   e-107
Medtr8g103020.2 | cytidine/deoxycytidylate deaminase family prot...   221   4e-58
Medtr8g103020.3 | cytidine/deoxycytidylate deaminase family prot...   221   4e-58

>Medtr8g103020.1 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr8:43383713-43390354 | 20130731
          Length = 420

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/269 (72%), Positives = 210/269 (78%), Gaps = 13/269 (4%)

Query: 1   MQSAVELATSDGLVVNAAVIVDPSAKQIISSARDQVFAWNTCKDDSFSRKPELLSSHPIS 60
           MQSAVELATSDGLVVNAAVIVDPSAKQI+S+ARD VFAWN CKDDS  RKP+L S+  IS
Sbjct: 154 MQSAVELATSDGLVVNAAVIVDPSAKQIVSTARDLVFAWNPCKDDSCYRKPDLFSAQSIS 213

Query: 61  NRFDPDKPLYSNSSCNQLKQRDTGVACLYPWQWTEXXXXXXXXXDWHPLRHAAIVAIESS 120
           N  DP+KPL+  SSCN LKQ    VACLYPWQW E           HPLRHAAIVAIESS
Sbjct: 214 NSLDPEKPLHL-SSCNHLKQSYRSVACLYPWQWAEQQSHSQSSYYCHPLRHAAIVAIESS 272

Query: 121 AARDRCLFPSEGNSEEKYLEMDHENPSCTSFPAKRQKTV-----------CATVEDNDKL 169
           AARDR LFP+   S EKYLE+DHE+PS TS P KRQKTV              +ED DKL
Sbjct: 273 AARDRHLFPNNEGSREKYLELDHESPS-TSSPLKRQKTVKDDKLNGHSQTSNHIEDGDKL 331

Query: 170 NGHNETSTQLSARPYLCTGYDIYLAWEPCIMCAMALVHQRIRRIFYRFPNPNAGALGSVH 229
           N H++TS  LSARPYLCTGYDIYLAWEPC MCAMALVHQRIRRIFY FPNP  GALGSVH
Sbjct: 332 NIHSQTSDLLSARPYLCTGYDIYLAWEPCTMCAMALVHQRIRRIFYAFPNPKTGALGSVH 391

Query: 230 RLQGEKSLNHHYAVFRVMLPEQTLHKCNT 258
           RLQGEKSLNHHYAVFRV++PE+ LHKC+T
Sbjct: 392 RLQGEKSLNHHYAVFRVLIPEEALHKCHT 420


>Medtr8g103020.2 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr8:43383713-43390354 | 20130731
          Length = 330

 Score =  221 bits (564), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 117/163 (71%), Positives = 126/163 (77%), Gaps = 2/163 (1%)

Query: 1   MQSAVELATSDGLVVNAAVIVDPSAKQIISSARDQVFAWNTCKDDSFSRKPELLSSHPIS 60
           MQSAVELATSDGLVVNAAVIVDPSAKQI+S+ARD VFAWN CKDDS  RKP+L S+  IS
Sbjct: 154 MQSAVELATSDGLVVNAAVIVDPSAKQIVSTARDLVFAWNPCKDDSCYRKPDLFSAQSIS 213

Query: 61  NRFDPDKPLYSNSSCNQLKQRDTGVACLYPWQWTEXXXXXXXXXDWHPLRHAAIVAIESS 120
           N  DP+KPL+  SSCN LKQ    VACLYPWQW E           HPLRHAAIVAIESS
Sbjct: 214 NSLDPEKPLHL-SSCNHLKQSYRSVACLYPWQWAEQQSHSQSSYYCHPLRHAAIVAIESS 272

Query: 121 AARDRCLFPSEGNSEEKYLEMDHENPSCTSFPAKRQKTVCATV 163
           AARDR LFP+   S EKYLE+DHE+PS TS P KRQKTV ATV
Sbjct: 273 AARDRHLFPNNEGSREKYLELDHESPS-TSSPLKRQKTVSATV 314


>Medtr8g103020.3 | cytidine/deoxycytidylate deaminase family protein
           | HC | chr8:43383713-43390354 | 20130731
          Length = 330

 Score =  221 bits (564), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 117/163 (71%), Positives = 126/163 (77%), Gaps = 2/163 (1%)

Query: 1   MQSAVELATSDGLVVNAAVIVDPSAKQIISSARDQVFAWNTCKDDSFSRKPELLSSHPIS 60
           MQSAVELATSDGLVVNAAVIVDPSAKQI+S+ARD VFAWN CKDDS  RKP+L S+  IS
Sbjct: 154 MQSAVELATSDGLVVNAAVIVDPSAKQIVSTARDLVFAWNPCKDDSCYRKPDLFSAQSIS 213

Query: 61  NRFDPDKPLYSNSSCNQLKQRDTGVACLYPWQWTEXXXXXXXXXDWHPLRHAAIVAIESS 120
           N  DP+KPL+  SSCN LKQ    VACLYPWQW E           HPLRHAAIVAIESS
Sbjct: 214 NSLDPEKPLHL-SSCNHLKQSYRSVACLYPWQWAEQQSHSQSSYYCHPLRHAAIVAIESS 272

Query: 121 AARDRCLFPSEGNSEEKYLEMDHENPSCTSFPAKRQKTVCATV 163
           AARDR LFP+   S EKYLE+DHE+PS TS P KRQKTV ATV
Sbjct: 273 AARDRHLFPNNEGSREKYLELDHESPS-TSSPLKRQKTVSATV 314