Miyakogusa Predicted Gene
- Lj3g3v1261190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1261190.1 tr|Q2HSH7|Q2HSH7_MEDTR Histone deacetylase
OS=Medicago truncatula GN=MTR_2g087270 PE=4
SV=1,86.23,0,Arginase/deacetylase,NULL; HDASUPER,Histone deacetylase
superfamily; no description,Histone deacetyl,CUFF.42389.1
(385 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g087270.1 | histone deacetylase superfamily protein | HC |... 636 0.0
Medtr4g111985.2 | histone deacetylase superfamily protein | HC |... 134 2e-31
Medtr4g111985.5 | histone deacetylase superfamily protein | HC |... 134 2e-31
Medtr4g111985.1 | histone deacetylase superfamily protein | HC |... 133 3e-31
Medtr4g111985.3 | histone deacetylase superfamily protein | HC |... 132 6e-31
Medtr4g111985.4 | histone deacetylase superfamily protein | HC |... 132 6e-31
Medtr4g109500.2 | histone deacetylase superfamily protein | HC |... 132 7e-31
Medtr4g109500.1 | histone deacetylase superfamily protein | HC |... 132 8e-31
Medtr8g093800.1 | histone deacetylase superfamily protein | HC |... 131 1e-30
Medtr3g077160.1 | histone deacetylase family protein | HC | chr3... 88 1e-17
Medtr4g055080.1 | histone deacetylase family protein | HC | chr4... 87 2e-17
Medtr4g055080.2 | histone deacetylase family protein | HC | chr4... 87 2e-17
Medtr3g118535.1 | histone deacetylase family protein | HC | chr3... 87 3e-17
Medtr5g004640.2 | histone deacetylase family protein | HC | chr5... 84 3e-16
Medtr5g004640.1 | histone deacetylase family protein | HC | chr5... 84 3e-16
Medtr1g016440.1 | histone deacetylase superfamily protein | HC |... 50 4e-06
>Medtr2g087270.1 | histone deacetylase superfamily protein | HC |
chr2:36680260-36677137 | 20130731
Length = 386
Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/385 (79%), Positives = 337/385 (87%), Gaps = 1/385 (0%)
Query: 1 MATDTDAAS-SSMVNRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNM 59
MAT+ DAA+ SS VN+++VFWHEGML HDTG+GVFD+GI+PGFLD+LEKHPENSDRVKNM
Sbjct: 1 MATNRDAAAESSSVNKIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNM 60
Query: 60 VSILKRGPISPYISWNIGRSALIHELHSFHSPEYVNELVEADKEGGKTLCSGTFLNPGSW 119
VSILKRGPISPY+SW++GR ALI EL SFH+PEY+NELV+ADK+G K LC+GTFLNPGSW
Sbjct: 61 VSILKRGPISPYVSWHLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSW 120
Query: 120 DXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDS 179
D GTTLSSMKHLLDG+GKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDS
Sbjct: 121 DAALLAAGTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDS 180
Query: 180 GCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXX 239
GCKKVAVIDIDVHYGNGTAEGFY S+KVLT+SLHMNHGSWGPSHPQSGS+D
Sbjct: 181 GCKKVAVIDIDVHYGNGTAEGFYSSNKVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYG 240
Query: 240 XXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGY 299
IPLPNGTGD GYVYAFNELVVPSI KF PD+IVLV+GQDSSAFDPNGRQCLTMEGY
Sbjct: 241 YNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGY 300
Query: 300 REIGRIVHGLAAKHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXXXXIAYYPE 359
REIGRIVHGLA +HSDGRLLIVQEGGYHVTYSAYCLHATLEGV +AYYPE
Sbjct: 301 REIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPE 360
Query: 360 DETFPVKVIEAIKNYMKDEVHLWKA 384
D+TF VKVIEA++NY+ D++ LWK
Sbjct: 361 DKTFSVKVIEAVQNYVTDKMPLWKT 385
>Medtr4g111985.2 | histone deacetylase superfamily protein | HC |
chr4:46338588-46328537 | 20130731
Length = 599
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 49 HPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGGKT 107
HPE DR++ + + L R I P +I R EL HS E++ + K
Sbjct: 218 HPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSY 277
Query: 108 LCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLN 167
S T+ N S G ++ G K +ALVRPPGHHA G+C N
Sbjct: 278 FTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHN 337
Query: 168 NAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSG 227
NA +A A +G +KV ++D DVH+GNGT E F ++ VL ISLH + G +P +G
Sbjct: 338 NAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHED--GTFYPGTG 395
Query: 228 SVDXXXXXXXXXXXXXIPLPN-GTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAF 286
IP G GD Y++AF +V+P +F PD ++ G D++
Sbjct: 396 GAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARG 455
Query: 287 DPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
DP G +T GY ++ +++ L S G++L++ EGGY++
Sbjct: 456 DPLGGCDITPSGYAQMTHMLNAL----SGGKMLVILEGGYNL 493
>Medtr4g111985.5 | histone deacetylase superfamily protein | HC |
chr4:46338860-46328537 | 20130731
Length = 599
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 49 HPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGGKT 107
HPE DR++ + + L R I P +I R EL HS E++ + K
Sbjct: 218 HPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSY 277
Query: 108 LCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLN 167
S T+ N S G ++ G K +ALVRPPGHHA G+C N
Sbjct: 278 FTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHN 337
Query: 168 NAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSG 227
NA +A A +G +KV ++D DVH+GNGT E F ++ VL ISLH + G +P +G
Sbjct: 338 NAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHED--GTFYPGTG 395
Query: 228 SVDXXXXXXXXXXXXXIPLPN-GTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAF 286
IP G GD Y++AF +V+P +F PD ++ G D++
Sbjct: 396 GAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARG 455
Query: 287 DPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
DP G +T GY ++ +++ L S G++L++ EGGY++
Sbjct: 456 DPLGGCDITPSGYAQMTHMLNAL----SGGKMLVILEGGYNL 493
>Medtr4g111985.1 | histone deacetylase superfamily protein | HC |
chr4:46339481-46328880 | 20130731
Length = 640
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 49 HPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGGKT 107
HPE DR++ + + L R I P +I R EL HS E++ + K
Sbjct: 257 HPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSY 316
Query: 108 LCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLN 167
S T+ N S G ++ G K +ALVRPPGHHA G+C N
Sbjct: 317 FTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHN 376
Query: 168 NAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSG 227
NA +A A +G +KV ++D DVH+GNGT E F ++ VL ISLH + G +P +G
Sbjct: 377 NAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHED--GTFYPGTG 434
Query: 228 SVDXXXXXXXXXXXXXIPLPN-GTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAF 286
IP G GD Y++AF +V+P +F PD ++ G D++
Sbjct: 435 GAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARG 494
Query: 287 DPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
DP G +T GY ++ +++ L S G++L++ EGGY++
Sbjct: 495 DPLGGCDITPSGYAQMTHMLNAL----SGGKMLVILEGGYNL 532
>Medtr4g111985.3 | histone deacetylase superfamily protein | HC |
chr4:46338755-46328564 | 20130731
Length = 512
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 49 HPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGGKT 107
HPE DR++ + + L R I P +I R EL HS E++ + K
Sbjct: 218 HPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSY 277
Query: 108 LCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLN 167
S T+ N S G ++ G K +ALVRPPGHHA G+C N
Sbjct: 278 FTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHN 337
Query: 168 NAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSG 227
NA +A A +G +KV ++D DVH+GNGT E F ++ VL ISLH + G +P +G
Sbjct: 338 NAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHED--GTFYPGTG 395
Query: 228 SVDXXXXXXXXXXXXXIPLPN-GTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAF 286
IP G GD Y++AF +V+P +F PD ++ G D++
Sbjct: 396 GAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARG 455
Query: 287 DPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGY 326
DP G +T GY ++ +++ L S G++L++ EGG+
Sbjct: 456 DPLGGCDITPSGYAQMTHMLNAL----SGGKMLVILEGGF 491
>Medtr4g111985.4 | histone deacetylase superfamily protein | HC |
chr4:46338588-46328564 | 20130731
Length = 512
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 49 HPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGGKT 107
HPE DR++ + + L R I P +I R EL HS E++ + K
Sbjct: 218 HPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSY 277
Query: 108 LCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLN 167
S T+ N S G ++ G K +ALVRPPGHHA G+C N
Sbjct: 278 FTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHN 337
Query: 168 NAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSG 227
NA +A A +G +KV ++D DVH+GNGT E F ++ VL ISLH + G +P +G
Sbjct: 338 NAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHED--GTFYPGTG 395
Query: 228 SVDXXXXXXXXXXXXXIPLPN-GTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAF 286
IP G GD Y++AF +V+P +F PD ++ G D++
Sbjct: 396 GAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARG 455
Query: 287 DPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGY 326
DP G +T GY ++ +++ L S G++L++ EGG+
Sbjct: 456 DPLGGCDITPSGYAQMTHMLNAL----SGGKMLVILEGGF 491
>Medtr4g109500.2 | histone deacetylase superfamily protein | HC |
chr4:45499722-45507261 | 20130731
Length = 650
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 33/350 (9%)
Query: 4 DTDAASSSMVNRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNMVSIL 63
+T +S+ RV + + E M H +D ++HPE +R++ + L
Sbjct: 7 ETRIKTSNQQRRVGLLYDERMCKH------YDPDD--------DRHPETPNRIRAIWDKL 52
Query: 64 KRGPISPYISWNIGRSALIHELHSFHSPEYVNELVEAD------KEGGKTLCSGTFLNPG 117
+ I+ + A L + H+ +VN + + + + N G
Sbjct: 53 QTTGITDRCLLLDAKEADDKHLLAVHTKNHVNLIKNISYKSYNSRSNAAAKLNSIYFNEG 112
Query: 118 SWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLAL 177
S G+ + ++K + + A A+VRPPGHH + +A G+C NN +A L
Sbjct: 113 STKSAYLAAGSAIEAVKRVASKELQSAVAIVRPPGHHCEQHKAMGFCLFNNVAVAASYLL 172
Query: 178 DS----GCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHP--QSGSVDX 231
+ G KK+ ++D DVH+GNGT + F+ +VL S+H + +G +P G +
Sbjct: 173 NDSPELGVKKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHE--FGRFYPCGDDGFYNM 230
Query: 232 XXXXXXXXXXXXIPLPNG-TGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNG 290
+P NG GD Y A++ +++P ++F PDII++ G D++ DP G
Sbjct: 231 TGEGDGAGYNINVPWENGRCGDTDYFAAWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLG 290
Query: 291 RQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHVTYSAYCLHATLE 340
C+T GY + + + A +GR+++V EGGY++ A +HA +E
Sbjct: 291 GCCITPFGYSLLLKKLMNFA----EGRIVLVLEGGYNLDSIAKSMHACVE 336
>Medtr4g109500.1 | histone deacetylase superfamily protein | HC |
chr4:45499722-45507261 | 20130731
Length = 655
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 33/350 (9%)
Query: 4 DTDAASSSMVNRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNMVSIL 63
+T +S+ RV + + E M H +D ++HPE +R++ + L
Sbjct: 7 ETRIKTSNQQRRVGLLYDERMCKH------YDPDD--------DRHPETPNRIRAIWDKL 52
Query: 64 KRGPISPYISWNIGRSALIHELHSFHSPEYVNELVEAD------KEGGKTLCSGTFLNPG 117
+ I+ + A L + H+ +VN + + + + N G
Sbjct: 53 QTTGITDRCLLLDAKEADDKHLLAVHTKNHVNLIKNISYKSYNSRSNAAAKLNSIYFNEG 112
Query: 118 SWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLAL 177
S G+ + ++K + + A A+VRPPGHH + +A G+C NN +A L
Sbjct: 113 STKSAYLAAGSAIEAVKRVASKELQSAVAIVRPPGHHCEQHKAMGFCLFNNVAVAASYLL 172
Query: 178 DS----GCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHP--QSGSVDX 231
+ G KK+ ++D DVH+GNGT + F+ +VL S+H + +G +P G +
Sbjct: 173 NDSPELGVKKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHE--FGRFYPCGDDGFYNM 230
Query: 232 XXXXXXXXXXXXIPLPNG-TGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNG 290
+P NG GD Y A++ +++P ++F PDII++ G D++ DP G
Sbjct: 231 TGEGDGAGYNINVPWENGRCGDTDYFAAWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLG 290
Query: 291 RQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHVTYSAYCLHATLE 340
C+T GY + + + A +GR+++V EGGY++ A +HA +E
Sbjct: 291 GCCITPFGYSLLLKKLMNFA----EGRIVLVLEGGYNLDSIAKSMHACVE 336
>Medtr8g093800.1 | histone deacetylase superfamily protein | HC |
chr8:39251957-39246652 | 20130731
Length = 420
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 142/314 (45%), Gaps = 23/314 (7%)
Query: 47 EKHPENSDRVKNMVSILKRGPI------SPYISWNIGRSALIHELHSFHSPEYVN---EL 97
E HPE+ RV +V+ L++ + S I A ++ S H+ YV+ ++
Sbjct: 75 ESHPESHFRVPAIVTALQQMKLTSKFRGSEVIELQNFEPASTDDIASVHARAYVSGLEKV 134
Query: 98 VEADKEGGKTLCSG---TFLNPGSWDXXXXXXGTTLSSMKHLLDGNG-----KVAYALVR 149
++ E G + G T+ ++ G L+ + ++ + +AL+R
Sbjct: 135 MDQALEKGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDSVVAASKIMKDPPTGFALIR 194
Query: 150 PPGHHAQPSQADGYCFLNNAGLAVQLALD-SGCKKVAVIDIDVHYGNGTAEGFYRSDKVL 208
PPGHHA P G+C N +A + A G K+V +ID DVH+GNGT + FY V
Sbjct: 195 PPGHHAIPKGPMGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVF 254
Query: 209 TISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQ 268
+S H + S+P +G D +PLP G+GD F+E+VVP Q
Sbjct: 255 FLSFHQDG-----SYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQ 309
Query: 269 KFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
+F PDII++ G D DP LT Y + + LA GR + EGGY++
Sbjct: 310 RFKPDIILVSAGYDGHVLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNL 369
Query: 329 TYSAYCLHATLEGV 342
+Y + T +
Sbjct: 370 KSLSYSVADTFRAL 383
>Medtr3g077160.1 | histone deacetylase family protein | HC |
chr3:34636818-34643051 | 20130731
Length = 476
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HHA+ ++A G+C++N+ L + L L ++V +DIDVH+G+G E FY +D+V+T+S
Sbjct: 161 HHAKKAEASGFCYVNDIVLGI-LELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 219
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGP 272
H +G P +G + +PL +G D+ + F ++ + + P
Sbjct: 220 H----KFGDFFPGTGHIKDTGVGPGKDYALNVPLNDGMDDENFRALFRPIMQKVMDVYQP 275
Query: 273 DIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHVTYSA 332
D +VL G DS + D G L+++G+ + R + L+++ GGY V A
Sbjct: 276 DAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVP-----LMVLGGGGYTVRNVA 330
Query: 333 YC 334
C
Sbjct: 331 RC 332
>Medtr4g055080.1 | histone deacetylase family protein | HC |
chr4:20032485-20022768 | 20130731
Length = 430
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 23/262 (8%)
Query: 84 ELHSFHSPEYVNEL---------VEADKEGGKTLCSGTFLNPGSWDXXXXXXGTTLSSMK 134
EL FHS +YV L + +D+ L + ++ G T+ + +
Sbjct: 59 ELAQFHSADYVEFLHRITPDTQHLFSDELAKYNLGEDCPVFDNLFEFCQMYAGGTIDAAR 118
Query: 135 HLLDGNGKVAYALVRPPG--HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVH 192
L N K+ + G HHA+ +A G+C++N+ L + L L +V IDIDVH
Sbjct: 119 RL---NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI-LELLKHHPRVLYIDIDVH 174
Query: 193 YGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGD 252
+G+G E FY +D+V+T+S H + P +G +PL +G D
Sbjct: 175 HGDGVEEAFYFTDRVMTVSSHKYGDLFFPG---TGDAKEIGEREGKFYAINVPLKDGIDD 231
Query: 253 KGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAK 312
+ F ++ ++ + P IVL G DS A D G L+++G+ E R V K
Sbjct: 232 SSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV-----K 286
Query: 313 HSDGRLLIVQEGGYHVTYSAYC 334
+ LL+ GGY A C
Sbjct: 287 KFNVPLLVTGGGGYTKENVARC 308
>Medtr4g055080.2 | histone deacetylase family protein | HC |
chr4:20028709-20022768 | 20130731
Length = 405
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 23/262 (8%)
Query: 84 ELHSFHSPEYVNEL---------VEADKEGGKTLCSGTFLNPGSWDXXXXXXGTTLSSMK 134
EL FHS +YV L + +D+ L + ++ G T+ + +
Sbjct: 34 ELAQFHSADYVEFLHRITPDTQHLFSDELAKYNLGEDCPVFDNLFEFCQMYAGGTIDAAR 93
Query: 135 HLLDGNGKVAYALVRPPG--HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVH 192
L N K+ + G HHA+ +A G+C++N+ L + L L +V IDIDVH
Sbjct: 94 RL---NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI-LELLKHHPRVLYIDIDVH 149
Query: 193 YGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGD 252
+G+G E FY +D+V+T+S H + P +G +PL +G D
Sbjct: 150 HGDGVEEAFYFTDRVMTVSSHKYGDLFFPG---TGDAKEIGEREGKFYAINVPLKDGIDD 206
Query: 253 KGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAK 312
+ F ++ ++ + P IVL G DS A D G L+++G+ E R V K
Sbjct: 207 SSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV-----K 261
Query: 313 HSDGRLLIVQEGGYHVTYSAYC 334
+ LL+ GGY A C
Sbjct: 262 KFNVPLLVTGGGGYTKENVARC 283
>Medtr3g118535.1 | histone deacetylase family protein | HC |
chr3:55483175-55497394 | 20130731
Length = 498
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HHA+ +A G+C++N+ LA+ L L ++V +DID+H+G+G E FY +D+V+T+S
Sbjct: 149 HHAKKCEASGFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 207
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGP 272
H +G P +G + +PL +G D+ Y F L+ ++ F P
Sbjct: 208 H----KFGDYFPGTGDLRDIGYGKGKYYSLNVPLDDGIDDESYHLLFKPLICKVMEIFRP 263
Query: 273 DIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGL 309
+VL G DS + D G L++ G+ E R +
Sbjct: 264 GAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSF 300
>Medtr5g004640.2 | histone deacetylase family protein | HC |
chr5:52671-45920 | 20130731
Length = 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HHA+ +A G+C++N+ LA+ L L ++V +DID+H+G+G E FY +D+V+T+S
Sbjct: 152 HHAKKCEASGFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 210
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGP 272
H +G P +G V +PL +G D+ Y F L+ ++ F P
Sbjct: 211 H----KFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMGKVMEVFRP 266
Query: 273 DIIVLVIGQDSSAFDPNGRQCLTMEGYRE 301
+VL G DS + D G L+++G+ E
Sbjct: 267 GAVVLQCGADSLSGDRLGCFNLSIKGHAE 295
>Medtr5g004640.1 | histone deacetylase family protein | HC |
chr5:52671-45920 | 20130731
Length = 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HHA+ +A G+C++N+ LA+ L L ++V +DID+H+G+G E FY +D+V+T+S
Sbjct: 152 HHAKKCEASGFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 210
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGP 272
H +G P +G V +PL +G D+ Y F L+ ++ F P
Sbjct: 211 H----KFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMGKVMEVFRP 266
Query: 273 DIIVLVIGQDSSAFDPNGRQCLTMEGYRE 301
+VL G DS + D G L+++G+ E
Sbjct: 267 GAVVLQCGADSLSGDRLGCFNLSIKGHAE 295
>Medtr1g016440.1 | histone deacetylase superfamily protein | HC |
chr1:4371842-4377658 | 20130731
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLA-LDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTIS 211
HH G+C + L + A + +V +ID+D H GNG F ++V +
Sbjct: 159 HHCSAENGGGFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILD 218
Query: 212 LHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFG 271
++ N G + H ++ + + +GT + Y+ +E + + ++F
Sbjct: 219 MY-NPGIYPLDHEARSYINQK-----------VEVKSGTRTEEYLLKLDEALEVAGRRFN 266
Query: 272 PDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGY 326
P+++V G D DP GR ++ +G V A K + ++++ GGY
Sbjct: 267 PELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFARK-KNIPIVMLTSGGY 320