Miyakogusa Predicted Gene

Lj3g3v1238810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1238810.1 Non Characterized Hit- tr|F6HYA9|F6HYA9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.85,8e-17,seg,NULL,NODE_46642_length_363_cov_69.446281.path1.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g014050.1 | casein kinase I-like protein | HC | chr8:43667...    57   5e-09
Medtr3g110240.1 | casein kinase I-like protein | HC | chr3:51437...    51   2e-07
Medtr7g006030.1 | casein kinase I-like protein | HC | chr7:47375...    50   7e-07

>Medtr8g014050.1 | casein kinase I-like protein | HC |
           chr8:4366739-4373009 | 20130731
          Length = 691

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)

Query: 76  VVAEKQMD--DSGGRSNDKAVAGEDESTALVIPDKVQVGNSPLYKVEKK 122
           ++ EKQM+  + GG S DKA AGE++S   VIP+KVQV  SPLYK EKK
Sbjct: 85  MIEEKQMEEFNRGGHSIDKANAGEEDSNGFVIPEKVQVSTSPLYKTEKK 133


>Medtr3g110240.1 | casein kinase I-like protein | HC |
           chr3:51437862-51442661 | 20130731
          Length = 681

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 5/55 (9%)

Query: 73  EKEVVA---EKQMD--DSGGRSNDKAVAGEDESTALVIPDKVQVGNSPLYKVEKK 122
           EK VV    E+ MD  DSGGRS DKA   E+E +A  +P+K+QVG SPLY++++K
Sbjct: 72  EKSVVRVSREEAMDEYDSGGRSADKAPGAEEEGSATPLPEKIQVGGSPLYRLDRK 126


>Medtr7g006030.1 | casein kinase I-like protein | HC |
           chr7:473752-481448 | 20130731
          Length = 599

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 83  DDSGGRSNDKAVAGEDESTALVIPDKVQVGNSPLYKVEKK 122
           D+SGG S +K VA EDE      P++VQVG SP++KVE+K
Sbjct: 3   DESGGLSANKGVAQEDEGNTTPFPERVQVGGSPMFKVERK 42