Miyakogusa Predicted Gene

Lj3g3v1193490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1193490.1 Non Characterized Hit- tr|I1M4B4|I1M4B4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.73,0,seg,NULL;
FAD/NAD(P)-binding domain,NULL; Lycopene_cycl,Lycopene cyclase-type,
FAD-binding; no descr,CUFF.42348.1
         (309 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast pr...   459   e-129
Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast pr...   404   e-113
Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC | chr7:...   300   1e-81
Medtr2g040060.1 | lycopene epsilon cyclase | HC | chr2:17570312-...   154   9e-38

>Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36455122-36457181 | 20130731
          Length = 502

 Score =  459 bits (1180), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/313 (71%), Positives = 249/313 (79%), Gaps = 8/313 (2%)

Query: 1   MDTRFLLFSPPPPTNLHHRHRLLRSPKPSTTIHHNXXXXXXXXXXXXXXXIHSKFGNFLD 60
           M T  +L SPPPPT     H+L  S  P    H                    KFGNFLD
Sbjct: 1   MGTSLMLISPPPPTK---THQLTPSTFPFLKTHQTISLPSSRKTNTMINST-KKFGNFLD 56

Query: 61  MMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDPLSI 120
           +  EYQPEALDFDLPW HPSDR++FDVII+GAGPAGIRLAEQVS YGIKVCCVDP+PLS+
Sbjct: 57  LKSEYQPEALDFDLPWHHPSDRSQFDVIIVGAGPAGIRLAEQVSLYGIKVCCVDPNPLSM 116

Query: 121 WPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGC 180
           WPNNYGVW DEFE LGLEDCLDKTW MAS++ID+ KTKYLDRCYGRVSRKKLKE+LV+GC
Sbjct: 117 WPNNYGVWLDEFEGLGLEDCLDKTWPMASIYIDDNKTKYLDRCYGRVSRKKLKEKLVKGC 176

Query: 181 VSNGVRFHKAKAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYD----KVRNC 236
           V NGVRF+KAK W+I H EFES+++CDDGT+LKGSL+VDASGFGS+F  YD    + +N 
Sbjct: 177 VFNGVRFYKAKVWEIKHHEFESIVVCDDGTKLKGSLVVDASGFGSNFTDYDNHKLRKKNY 236

Query: 237 GCQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVF 296
           GCQIAHGVL EV+ HPFDLDKMVLMDWRDSHLGNEP LR  N K PTFLYAMPFSSNL+F
Sbjct: 237 GCQIAHGVLVEVDGHPFDLDKMVLMDWRDSHLGNEPYLRDGNSKFPTFLYAMPFSSNLIF 296

Query: 297 LEETSLVSRPVLS 309
           LEETSLVSRPVLS
Sbjct: 297 LEETSLVSRPVLS 309


>Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36463401-36461725 | 20130731
          Length = 490

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/320 (65%), Positives = 240/320 (75%), Gaps = 34/320 (10%)

Query: 1   MDTRFLLFSPP-------PPTNLHHRHRLLRSPKPSTTIHHNXXXXXXXXXXXXXXXIHS 53
           M+T  +LFSPP       P    HH     R+  PS+   H                IH+
Sbjct: 1   MNTSVMLFSPPITTPSIFPLPKTHHN----RTSLPSSRKQHQGR-------------IHN 43

Query: 54  --KFGNFLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVC 111
             KFGNFLD+  EYQPEALDFDLP  HPSD   F+VIIIGAGPAGIRLAEQVS YG+KVC
Sbjct: 44  TRKFGNFLDLKSEYQPEALDFDLPLFHPSDHTCFNVIIIGAGPAGIRLAEQVSLYGMKVC 103

Query: 112 CVDPDPLSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKK 171
           CVDP+PLSIWPNNYGVW DEFE LGLEDCLDKTW + S++ID+  TKYLDRCYGRV+++K
Sbjct: 104 CVDPNPLSIWPNNYGVWFDEFEGLGLEDCLDKTWPITSIYIDDRTTKYLDRCYGRVNKRK 163

Query: 172 LKERLVEGCVSNGVRFHKAKAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYD 231
           LKE LV+GCV NGVRF+KAKA +I H EFES+++CDDG +LKGSL+VDASGFGS F++YD
Sbjct: 164 LKENLVKGCVFNGVRFYKAKAMQIEHHEFESIVVCDDGVDLKGSLVVDASGFGSKFIEYD 223

Query: 232 --KVRNCGCQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMP 289
             KV+N G QIA+GVLAEV+ HPFDLDK+VLMDWRDSH       R  N K  TF+YAMP
Sbjct: 224 DHKVKNYGFQIAYGVLAEVDAHPFDLDKVVLMDWRDSH------CRDGNAKSSTFMYAMP 277

Query: 290 FSSNLVFLEETSLVSRPVLS 309
           FSSNL+FLEETSLVSRP LS
Sbjct: 278 FSSNLIFLEETSLVSRPALS 297


>Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC |
           chr7:35385688-35387184 | 20130731
          Length = 498

 Score =  300 bits (768), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 138/251 (54%), Positives = 194/251 (77%)

Query: 58  FLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDP 117
            L+++PE++ E LDF+LP    +     D++++G GPAG+ +A+QVS  G+ VC +DP+P
Sbjct: 55  LLELVPEFKKENLDFELPLYDSTKGTVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPNP 114

Query: 118 LSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLV 177
             IWPNNYGVW DEFE++ L DCLDKTW+ A V+ID+   K LDR YGRV+RK LK +++
Sbjct: 115 RLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKML 174

Query: 178 EGCVSNGVRFHKAKAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCG 237
           + C++NGV+FH+AK  K++H+E +SML+C+DG  ++ ++++DA+GF    V+YDK  N G
Sbjct: 175 QKCIANGVKFHQAKVIKVIHEESKSMLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPG 234

Query: 238 CQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFL 297
            Q+A+G+LAEVE+HPFD+DKM+ MDWRDSHL N+  L+  N K+PTFLYAMPFSS  +FL
Sbjct: 235 YQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNDLKLKERNSKIPTFLYAMPFSSTKIFL 294

Query: 298 EETSLVSRPVL 308
           EETSLV+RP L
Sbjct: 295 EETSLVARPGL 305


>Medtr2g040060.1 | lycopene epsilon cyclase | HC |
           chr2:17570312-17577439 | 20130731
          Length = 531

 Score =  154 bits (390), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 130/228 (57%), Gaps = 10/228 (4%)

Query: 85  FDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPD-PLSIWPNNYGVWCDEFESLGLEDCLDK 143
            D+++IG GPAG+ LA +  + G+KV  + PD P +   NNYGVW DEF+ LGLE C++ 
Sbjct: 110 LDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFT---NNYGVWEDEFKGLGLEGCIEH 166

Query: 144 TWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVSNGVRFHKAKAWKIVH-QEFES 202
            W    V+ID      + R YGRVSR  L E L+  CV +GV +  +K  +IV      +
Sbjct: 167 VWKDTVVYIDNKNPISIGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHN 226

Query: 203 MLLCDDGTELKGSLIVDASGFGS-DFVKYDKVRNCGC-QIAHGVLAEVEDHPFDLDKMVL 260
            ++C+  T +   L   ASG  S   ++Y+      C Q A+GV  EVE+ P+D + MV 
Sbjct: 227 HVVCEYDTVVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVF 286

Query: 261 MDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVL 308
           MD+RD    N  +L A   K PTFLYAMP S + VF EET L S+  +
Sbjct: 287 MDYRDYMKNNVQSLEA---KYPTFLYAMPMSRSKVFFEETCLASKDAM 331