Miyakogusa Predicted Gene

Lj3g3v1182350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1182350.2 CUFF.42334.2
         (428 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   610   e-175
Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   434   e-122
Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   429   e-120
Medtr8g026680.1 | Rac GTPase activating protein | HC | chr8:9249...   382   e-106
Medtr1g089500.1 | Rac GTPase activating protein | HC | chr1:3999...   376   e-104
Medtr7g107560.1 | Rac GTPase activating protein | HC | chr7:4387...   342   3e-94
Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   242   5e-64
Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   222   5e-58

>Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr2:36405412-36408662 |
           20130731
          Length = 451

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/401 (74%), Positives = 333/401 (83%), Gaps = 3/401 (0%)

Query: 31  LVTLFRKSFVAAFKSGRKHLCAMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPDVPRRP 90
           LVTLFRKS      SG K LC MDI  PTNVRHVAHVTFDRFNGFLGLP EFEPD PRRP
Sbjct: 51  LVTLFRKSLFPFKSSGNKDLCNMDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPDFPRRP 110

Query: 91  PSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEEN 150
           PSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLY Q GLQVEGIFRIN DNSQEE+
Sbjct: 111 PSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQEGLQVEGIFRINADNSQEEH 170

Query: 151 VRDQLNMGLIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCETEEECVELARNLP 210
           VR+QLNMGL+PE IDVHCLAGLIKAWFRELP+G+LDSLS EQVMQC+TEE+C+EL R+LP
Sbjct: 171 VRNQLNMGLVPEDIDVHCLAGLIKAWFRELPSGVLDSLSQEQVMQCQTEEDCIELVRHLP 230

Query: 211 HTEAALLDWAINLMADVVQQEHVNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLK 270
           H EAALLDWAINLMADVV+ E++NKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLK
Sbjct: 231 HAEAALLDWAINLMADVVEHENLNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLK 290

Query: 271 SLILRTLQERKDSVVESHPKLYPGPSDENGNRTLLESCQQDTMXXXXXXXXXX--XXXXX 328
           +LILRTL+ERKDSVVES+P+L   PSDENG+R L ES Q++                   
Sbjct: 291 TLILRTLRERKDSVVESNPRLNLEPSDENGHRRLFESFQKEDTAAADNKEAKEIFVSEKT 350

Query: 329 XXXCSPEPLQNNTSTGGESDSLVSSSENTICNEDLYCEFPPKGNMGK-GKPAQSSSSNAR 387
              C+PE L+ N+ST  ES SL+ +SEN ICNE+LYCEFPPK NMGK  K  QSSSSNAR
Sbjct: 351 VVECTPESLEKNSSTERESGSLIRTSENPICNEELYCEFPPKKNMGKNNKSGQSSSSNAR 410

Query: 388 KGTKKTRGKQPVVDQTVPAEKRGMRSASNTDSRYERVEAWR 428
           KG+KKTRG+QPV++     EK+GMR+ S+TD+R +RVEAWR
Sbjct: 411 KGSKKTRGQQPVINGKGSVEKKGMRTLSSTDTRSDRVEAWR 451


>Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr4:19175348-19178049 |
           20130731
          Length = 363

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/281 (74%), Positives = 230/281 (81%), Gaps = 4/281 (1%)

Query: 31  LVTLFRKSFVAAFKSGRKHLCAMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPDVPRRP 90
           LVTLFRKS V+          AM+IG PTNVRH+AHVTFDRFNGFLGLP+E  P VP  P
Sbjct: 74  LVTLFRKSLVSCASDAS----AMEIGHPTNVRHLAHVTFDRFNGFLGLPLELVPQVPTTP 129

Query: 91  PSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEEN 150
           PSASATVFGVSTESM+LSYD RGN VPTILLL+Q HLYAQGGLQ EGIFRIN DN QEE 
Sbjct: 130 PSASATVFGVSTESMKLSYDRRGNIVPTILLLIQEHLYAQGGLQAEGIFRINADNRQEEY 189

Query: 151 VRDQLNMGLIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCETEEECVELARNLP 210
           +RDQLN G++PE IDVHCLAGLIKAWFRELP G+LDSLSPEQVM C+TEE+C EL   LP
Sbjct: 190 LRDQLNKGVVPEDIDVHCLAGLIKAWFRELPRGVLDSLSPEQVMTCQTEEDCAELMSQLP 249

Query: 211 HTEAALLDWAINLMADVVQQEHVNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLK 270
           HTEA+LL+W INLMADVVQ+EH+NKMNARNIAMVFAPNMT+MADP TA MYAVQVMNFLK
Sbjct: 250 HTEASLLNWTINLMADVVQEEHLNKMNARNIAMVFAPNMTRMADPLTAFMYAVQVMNFLK 309

Query: 271 SLILRTLQERKDSVVESHPKLYPGPSDENGNRTLLESCQQD 311
           +L+  TL+ER DS VES P+ Y  P DEN   +   S QQD
Sbjct: 310 TLVSMTLKERNDSDVESSPEFYIEPFDENEEHSHCNSFQQD 350


>Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:42531591-42525668 |
           20130731
          Length = 477

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/413 (55%), Positives = 274/413 (66%), Gaps = 25/413 (6%)

Query: 31  LVTLFRKSFVAAFKSGRKHLCAMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPDVPRRP 90
           L+  FRKS +    +G +   +M+IG P+NVRHVAHVTFDRF+GFLGLPVEFEP+VP RP
Sbjct: 75  LIATFRKSLIGCTNTGSELSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPTRP 134

Query: 91  PSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEEN 150
           PSAS +VFGVSTESMQLS+D+RGNSVPTILLLMQRHLYAQGGLQ EGIFRIN +NSQEE 
Sbjct: 135 PSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEF 194

Query: 151 VRDQLNMGLIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCETEEECVELARNLP 210
           VR+QLN G++P GIDVHCLAGLIKAWFRELPTGILD LSPEQVMQ +TEEEC +L R LP
Sbjct: 195 VREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQTEEECAQLVRLLP 254

Query: 211 HTEAALLDWAINLMADVVQQEHVNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLK 270
            TE+ALLDWA+NLMADV Q EH+NKMNARNIAMVFAPNMT M DP TALMYAVQVMNFLK
Sbjct: 255 ATESALLDWAVNLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLK 314

Query: 271 SLILRTLQERKDSVVESHPKLYPGPSDENGNRT---LLESCQQDTMXXXXXXXXXXXXXX 327
           +L+  TL+ER++S+ +S+P       D++G+++   LL   + +                
Sbjct: 315 TLVAMTLKEREESITKSNPSSNLNSFDDDGHQSDSPLLFKDESEYGNDYSDEDTVFVTAE 374

Query: 328 XXXXCSPEPLQNNTSTGGESDSLVSSSENTICNEDLYCEFPPKGN------MGKGKPAQS 381
                     +++  T   S SL +S+EN          F P GN         G  +Q 
Sbjct: 375 PSQQSPTHLFKDDCETESGSKSLQTSTEN----------FIPSGNRLLVDSCPCGVVSQI 424

Query: 382 SSSNARKGTKKTRGKQPVVDQTVPA------EKRGMRSASNTDSRYERVEAWR 428
            S      TK  +  Q     T         + RG+      +SR E  EAWR
Sbjct: 425 CSMAIGDQTKNCKSLQLNTSDTDKCSAGSVEKNRGIALIGRINSRSELAEAWR 477


>Medtr8g026680.1 | Rac GTPase activating protein | HC |
           chr8:9249397-9245785 | 20130731
          Length = 492

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/256 (69%), Positives = 212/256 (82%), Gaps = 4/256 (1%)

Query: 47  RKHLCAMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPDVPRRPPSASATVFGVSTESMQ 106
           R+ + ++DI  PT VRHV+HVTFDRFNGFLGLP EF+P+VP R PSAS  VFGVS +SMQ
Sbjct: 103 REDVSSLDISWPTEVRHVSHVTFDRFNGFLGLPSEFQPEVPTRVPSASVKVFGVSAKSMQ 162

Query: 107 LSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEENVRDQLNMGLIPEGIDV 166
            SYD RGNSVPTILL MQ+ LY++GGL+ EGIFRI  +NSQE  VRDQLN G++P GIDV
Sbjct: 163 CSYDDRGNSVPTILLRMQKQLYSEGGLKAEGIFRITAENSQEAFVRDQLNKGVVPHGIDV 222

Query: 167 HCLAGLIKAWFRELPTGILDSLSPEQVMQCETEEECVELARNLPHTEAALLDWAINLMAD 226
           HCL+GLIKAWFRELPTG+LDSL+PEQVMQC TE++C  L + LP TEAALLDWAINLMAD
Sbjct: 223 HCLSGLIKAWFRELPTGVLDSLTPEQVMQCNTEDDCTNLVKLLPSTEAALLDWAINLMAD 282

Query: 227 VVQQEHVNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKSLILRTLQERKDSV-- 284
           VV+ E  NKMNARN+AMVFAPNMTQMADP TAL++AVQVMNFLK+LIL+ L+ER++S+  
Sbjct: 283 VVENEQFNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKMLREREESIDN 342

Query: 285 --VESHPKLYPGPSDE 298
             + SH   +   +DE
Sbjct: 343 ARLLSHSMDFASCNDE 358


>Medtr1g089500.1 | Rac GTPase activating protein | HC |
           chr1:39993064-39989777 | 20130731
          Length = 483

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/254 (69%), Positives = 213/254 (83%), Gaps = 5/254 (1%)

Query: 35  FRKSFVAAFKSGRKH-----LCAMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPDVPRR 89
            RKS VA       H     +  M+IG PT+V+H+ HVTFDRFNGFLGLPVEFE ++P R
Sbjct: 44  IRKSMVACRVDRPDHEVISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGR 103

Query: 90  PPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEE 149
            PSAS +VFGVS ESMQ SYDS+GNSVPTIL+LMQ  LY+QGGL+ EGIFRINP+NS+EE
Sbjct: 104 VPSASVSVFGVSAESMQCSYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKEE 163

Query: 150 NVRDQLNMGLIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCETEEECVELARNL 209
           +VR+QLN G++P+ IDVHCLAGLIKAWFRELP+G+LD LSPEQV++C TEEE +EL + L
Sbjct: 164 HVRNQLNSGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESIELVKQL 223

Query: 210 PHTEAALLDWAINLMADVVQQEHVNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFL 269
             TE+ALL WAI+LMADVVQ+E  NKMNARNIAMVFAPNMTQM+DP TALM+AVQVMN L
Sbjct: 224 KPTESALLSWAIDLMADVVQEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLL 283

Query: 270 KSLILRTLQERKDS 283
           K+LI++TL+ER+++
Sbjct: 284 KTLIMKTLREREET 297


>Medtr7g107560.1 | Rac GTPase activating protein | HC |
           chr7:43875012-43878185 | 20130731
          Length = 435

 Score =  342 bits (878), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 168/246 (68%), Positives = 205/246 (83%)

Query: 53  MDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPDVPRRPPSASATVFGVSTESMQLSYDSR 112
           M+IG PTNV+HV HVTFDRFNGFLGLP+E E  VP   PSAS +VFGVS ESMQ SYDS+
Sbjct: 60  MEIGWPTNVKHVNHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSK 119

Query: 113 GNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEENVRDQLNMGLIPEGIDVHCLAGL 172
           GNSVPTILLLMQ  LY+QGGL+ EGIFRINP+N +EE++R+QLN G++P  IDVHCLAGL
Sbjct: 120 GNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGL 179

Query: 173 IKAWFRELPTGILDSLSPEQVMQCETEEECVELARNLPHTEAALLDWAINLMADVVQQEH 232
           IKAWFRELP+G+LD LSPE+V++C TEEE VEL + L   E+ALL+WA++LMADVV +E 
Sbjct: 180 IKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKQLKPVESALLNWAVDLMADVVVEEE 239

Query: 233 VNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKSLILRTLQERKDSVVESHPKLY 292
            NKM+ARNIAMVFAPNMTQM+DP TALM+AVQVMN LK+LIL+TL++R+++    +  + 
Sbjct: 240 CNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREETATAEYSSMS 299

Query: 293 PGPSDE 298
              SDE
Sbjct: 300 SHSSDE 305


>Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr5:27034836-27036920 |
           20130731
          Length = 238

 Score =  242 bits (618), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 122/187 (65%), Positives = 143/187 (76%), Gaps = 11/187 (5%)

Query: 73  NGFLGLPVEFEPDVPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGG 132
           +GF+G    F  ++        ATVFGVSTESM+LSYD RGN VPTILLLMQ HLYAQGG
Sbjct: 33  SGFIGSQEPFPLEI------GGATVFGVSTESMKLSYDRRGNIVPTILLLMQEHLYAQGG 86

Query: 133 LQVEGIFRINPDNSQEENVRDQLNMGLIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQ 192
           LQ EGIFRIN DN QEE  RD+LN G++PE IDVHCL GLIK   +    G+LDSLSPEQ
Sbjct: 87  LQAEGIFRINADNRQEEYHRDELNKGVVPEDIDVHCLTGLIKGATK----GVLDSLSPEQ 142

Query: 193 VMQCETEEECVELARNLPHTEAALLDWAINLMADVVQQEHVNKMNARNIAMVFAPNMTQM 252
           VMQC+TEE+C ELA +LPHTEA+LL+W INLMADVVQ+EH+NKMNA NIAMVF  + + +
Sbjct: 143 VMQCQTEEDCAELASHLPHTEASLLNWTINLMADVVQEEHLNKMNACNIAMVFTKHDSDV 202

Query: 253 ADPFTAL 259
             PF  +
Sbjct: 203 R-PFDCI 208


>Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:31295617-31296762 |
           20130731
          Length = 182

 Score =  222 bits (566), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 106/160 (66%), Positives = 131/160 (81%), Gaps = 2/160 (1%)

Query: 92  SASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINPDNSQEENV 151
           + S +VFGVS ESMQ SYDS+GNSVP ILLLMQ  LY+QG  + +GIF IN +N +EE++
Sbjct: 14  AISVSVFGVSVESMQCSYDSKGNSVPAILLLMQERLYSQG--RTKGIFCINLENGEEEHL 71

Query: 152 RDQLNMGLIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCETEEECVELARNLPH 211
           R+Q N G++P  IDVHCLAGLIKAWFRELP+G+LD LSPE+V++C TEEE VEL + L  
Sbjct: 72  REQFNSGIVPIDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEEFVELVKLLKP 131

Query: 212 TEAALLDWAINLMADVVQQEHVNKMNARNIAMVFAPNMTQ 251
            E+ALL+WA++LMADVV +E  NK+NA NIAMVFAPNMTQ
Sbjct: 132 VESALLNWAVDLMADVVVEEEYNKLNAINIAMVFAPNMTQ 171