Miyakogusa Predicted Gene

Lj3g3v1170190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1170190.1 Non Characterized Hit- tr|B9SCS5|B9SCS5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,60.26,1e-16,BZIP,Basic-leucine zipper domain; no description,NULL;
seg,NULL; SUBFAMILY NOT NAMED,NULL; CAMP-RESP,CUFF.42322.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086340.1 | bZIP transcription factor | HC | chr2:36304919...    74   4e-14
Medtr2g086390.1 | ABA response element-binding factor | HC | chr...    49   7e-07

>Medtr2g086340.1 | bZIP transcription factor | HC |
           chr2:36304919-36306544 | 20130731
          Length = 324

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 45/78 (57%)

Query: 1   MLKNREXXXXXXXXXXXYTVXXXXXXXXXXXXXXXXXXILAEAERKRKQEILQRKHSTAA 60
           MLKNRE           YTV                  +LAEAE KRKQE+LQRKHST A
Sbjct: 247 MLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQVLAEAESKRKQELLQRKHSTKA 306

Query: 61  QKRTEKLRAIKRPLSTTW 78
           QK  EKLRA++RP+STTW
Sbjct: 307 QKGAEKLRAMRRPISTTW 324


>Medtr2g086390.1 | ABA response element-binding factor | HC |
           chr2:36319785-36322071 | 20130731
          Length = 288

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 1   MLKNREXXXXXXXXXXXYTVXXXXXXXXXXXXXXXXXXILAEAERKRKQEILQRKHSTAA 60
           M+KNRE           YT+                   LAEAERKRKQE+LQRK S   
Sbjct: 216 MMKNRESAARSRARKQAYTIELEAELNLLQEENKQLKQFLAEAERKRKQELLQRKQSAKV 275

Query: 61  QKRTEKLRAIKRPLSTTW 78
           QK TEK  +     STTW
Sbjct: 276 QKGTEKSSS-----STTW 288