Miyakogusa Predicted Gene

Lj3g3v1149120.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1149120.2 tr|G7ITP8|G7ITP8_MEDTR Histone transcription
regulator HIRA OS=Medicago truncatula GN=MTR_2g086140
P,77.54,0,SUBFAMILY NOT NAMED,NULL; MEMBER OF THE HIR1 FAMILY OF
WD-REPEAT PROTEINS,NULL; Hira,TUP1-like enhan,CUFF.42315.2
         (612 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086140.1 | histone transcription regulator HIRA protein |...   879   0.0  
Medtr4g053675.1 | histone transcription regulator HIRA protein |...   837   0.0  

>Medtr2g086140.1 | histone transcription regulator HIRA protein | HC
           | chr2:36226276-36219828 | 20130731
          Length = 992

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/561 (77%), Positives = 475/561 (84%), Gaps = 3/561 (0%)

Query: 3   KAFVHAGVTTKNVEPQVDDGIKSGGPAGDGSDKVTTSGRISSPVKQREYRRPDGRKRIIP 62
           KA V AG TTKN +PQV D  K GGP G+  + VTT+G IS PVKQ+EYRRPDGRKRIIP
Sbjct: 432 KACVSAGNTTKNSKPQVKDVKKIGGPVGNEPNMVTTTGLISGPVKQKEYRRPDGRKRIIP 491

Query: 63  EAVG--VQQENIS-GQQALDFPFVSSDHRKAPDRAVSNNDDIRASTLGGANFRSSDLKER 119
           E VG  VQ E+IS   Q  DFP VSS+H K+ D+A+S NDDIRASTLGG++ R SDLKER
Sbjct: 492 EVVGGPVQPESISSAAQQFDFPIVSSEHIKSSDKAISTNDDIRASTLGGSHVRHSDLKER 551

Query: 120 SGVTARATISESLVIQKVPASAGDGSINVEQLGNMMTXXXXXXXGATLTIRVFDKKGDDG 179
           SGVTAR TIS+ L+I+KV  ++GDG INV+Q+GN MT        +TL+IRVFDKKG  G
Sbjct: 552 SGVTARVTISDGLIIEKVSDTSGDGGINVQQMGNSMTSNSLAACSSTLSIRVFDKKGGVG 611

Query: 180 TSPILLEARPREHVVTDIAGVGNTSMTKETEILCTRGPHTLWSDRISGKVTVLAGNVNFW 239
           TSP+LLEARPREH V DIAG+ NTSM KETEI+CTRG  TLWSDRISGKVTVLAGNVNFW
Sbjct: 612 TSPVLLEARPREHTVNDIAGLANTSMMKETEIVCTRGDQTLWSDRISGKVTVLAGNVNFW 671

Query: 240 AVGCEDGSLQIYSKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGSLYLWDLFNRTCL 299
           AVGCEDG LQIY+KCGRRAMPTMMMGS+ATFVDCDECW L+LVTRKGSLYLWDL NRTCL
Sbjct: 672 AVGCEDGCLQIYTKCGRRAMPTMMMGSSATFVDCDECWSLMLVTRKGSLYLWDLLNRTCL 731

Query: 300 LQDSLASLVTSSPNSSAKDAGTIKVISAKLSKSGSPLVVLATRHAFLFDMSFKCWLRVAD 359
           LQDSL SLV SSPN S K+ GTIKVISAKLSKSGSPLVVLATRHAFLFDM+ KCWLRVAD
Sbjct: 732 LQDSLTSLVASSPNPSTKNEGTIKVISAKLSKSGSPLVVLATRHAFLFDMNVKCWLRVAD 791

Query: 360 DCFPASNFASSWSLGSIHGGELADLQVDLRKYMARKPGWTRVTDDGVQTRAHLESQLASS 419
           D FPASN +SSWSLGSI  GELA LQVDLRKY+ARKPGWTR+TDDGVQTRAHLE+QLASS
Sbjct: 792 DSFPASNLSSSWSLGSIQSGELAALQVDLRKYLARKPGWTRMTDDGVQTRAHLEAQLASS 851

Query: 420 LALGSPNDYRQCLLSYVRFLAREADESRLREVCESFLGPPTGMAEEASPDSNKLAWDPFV 479
           LALGS N+YRQCLLSYVRFLAREADESRLREVCE FLGPPTGMAEE S DSN LAWDPFV
Sbjct: 852 LALGSANEYRQCLLSYVRFLAREADESRLREVCEGFLGPPTGMAEEPSSDSNNLAWDPFV 911

Query: 480 LGMRKHQLLREDILPSMASNRKVQRLLNEFTDLLSEYDIVDDNQDQRNPMLPKSSSLGTK 539
           LGMRKH+LLREDILPSMASNRKVQRLLNEF DLLSE++IVD NQDQ   +LPKSSS  TK
Sbjct: 912 LGMRKHKLLREDILPSMASNRKVQRLLNEFMDLLSEFEIVDPNQDQMALVLPKSSSPATK 971

Query: 540 PIENGSLAKDHEENSDHAAMD 560
            IEN S+A D E+ +    +D
Sbjct: 972 LIENSSVAIDKEDGAQAKTLD 992


>Medtr4g053675.1 | histone transcription regulator HIRA protein | HC |
            chr4:19445007-19455001 | 20130731
          Length = 1031

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/601 (73%), Positives = 491/601 (81%), Gaps = 19/601 (3%)

Query: 1    MTKAFVHA-----GVTTKNVEPQVDDGIKSGGP-AGDGSDKVTTSGRISSPVKQREYRRP 54
            + KA+V        V  KNVEPQV+   KS GP  GD  +K+TTS RISSPVKQREYRRP
Sbjct: 433  IAKAYVDTRVGAKSVGAKNVEPQVEPNKKSDGPVGGDALNKITTSARISSPVKQREYRRP 492

Query: 55   DGRKRIIPEAVGV--QQENISG---QQALDFPFVSSDHRKAPDRAVSNNDDIRASTLGGA 109
            DGR+RIIPEAVGV  QQENISG    Q L FP +SS+H++  +  VSNND +R STLGGA
Sbjct: 493  DGRRRIIPEAVGVPVQQENISGAVQSQELGFPVMSSEHQRGNNGVVSNNDTVRTSTLGGA 552

Query: 110  NFRSSDLKERSGVTARATISESLVIQKVPASAG-DGSINVEQLGNMMTXXXXXXXGATLT 168
              R+SDLKERSGVTARATISESLVI+KVPAS+G DG+INVEQLGN  T        A L+
Sbjct: 553  PGRNSDLKERSGVTARATISESLVIEKVPASSGRDGTINVEQLGNSTTTGSH----AALS 608

Query: 169  IRVFDKKGDDGTSPILLEARPREHVVTDIAGVGNTSMTKETEILCTRGPHTLWSDRISGK 228
            IR+ DKK  + T PI LEARPREH V DIAGVGN SM +ETEI CTRGP TLWSDRISGK
Sbjct: 609  IRIVDKKSGEDTLPICLEARPREHAVNDIAGVGNASMMRETEIACTRGPQTLWSDRISGK 668

Query: 229  VTVLAGNVNFWAVGCEDGSLQIYSKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGSL 288
            VTVLAGN NF AVGCEDG LQIY+KCGRRAMPTMMMGSAA FVDCDE WKLLLVTRKGSL
Sbjct: 669  VTVLAGNANFLAVGCEDGCLQIYTKCGRRAMPTMMMGSAAIFVDCDESWKLLLVTRKGSL 728

Query: 289  YLWDLFNRTCLLQDSLASLVTSSPNSSAKDAGTIKVISAKLSKSGSPLVVLATRHAFLFD 348
            YLWDLF+RTCLLQDSL SLV SSP+SSAKD GTIKVISAKLSKSGSPLVVLATRHAF+FD
Sbjct: 729  YLWDLFSRTCLLQDSLVSLVASSPSSSAKDTGTIKVISAKLSKSGSPLVVLATRHAFIFD 788

Query: 349  MSFKCWLRVADDCFPASNFASSWSLGSIHGGELADLQVDLRKYMARKPGWTRVTDDGVQT 408
            MS KCWLRVADDCFPASNFASSWSLGSI  GELA LQVD++KY+ARKPGWTR+TDDGVQT
Sbjct: 789  MSLKCWLRVADDCFPASNFASSWSLGSIQSGELAALQVDVKKYLARKPGWTRMTDDGVQT 848

Query: 409  RAHLESQLASSLALGSPNDYRQCLLSYVRFLAREADESRLREVCESFLGPPTGMAEEASP 468
            RAHLE+QLASSLALGSPN+YRQCLLSYVRFLAREADESRLREVCESFLGPPTGMAEEAS 
Sbjct: 849  RAHLEAQLASSLALGSPNEYRQCLLSYVRFLAREADESRLREVCESFLGPPTGMAEEASS 908

Query: 469  DSNKLAWDPFVLGMRKHQLLREDILPSMASNRKVQRLLNEFTDLLSEYDIVDDNQDQRNP 528
            D + LAWDP VLGMRKH+LL EDILP+MASNRKVQRLLNEF DL+SEY+I D N DQRNP
Sbjct: 909  DKS-LAWDPVVLGMRKHKLLIEDILPAMASNRKVQRLLNEFMDLVSEYEIADTNHDQRNP 967

Query: 529  MLPKSSSLGTKPIENGSLAKDHEENSDHAAMDCQDNTLDQTRVLPNEASSDAHMTDQVNQ 588
            +L K+SS  T  IE+G L   +  ++   +MD  +  + ++R     A+++A   DQV Q
Sbjct: 968  VLLKTSSPVTNLIESGPLGT-YVNDTPEDSMD-NNTRVVESRENFTTAANEASAHDQVVQ 1025

Query: 589  D 589
            D
Sbjct: 1026 D 1026