Miyakogusa Predicted Gene

Lj3g3v1145890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1145890.2 Non Characterized Hit- tr|F6HHH5|F6HHH5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,35.92,7e-16,
,CUFF.42295.2
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086010.1 | histidine containing phosphotransfer protein, ...   133   5e-32
Medtr2g085155.1 | histidine containing phosphotransfer protein, ...   123   5e-29

>Medtr2g086010.1 | histidine containing phosphotransfer protein,
           putative | HC | chr2:36160457-36157114 | 20130731
          Length = 151

 Score =  133 bits (335), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 2/147 (1%)

Query: 3   MRLRIRQGLLQGHLNRMFDEEVVNSQFSTILWCPRNNRDRARDHAVQLIESYLADVDVIL 62
           M + I +GL+QG+L+ + DE VVN +F+ ++    NN    RD  VQ IE+Y ADVD+IL
Sbjct: 1   MTMAILKGLMQGYLSALLDEGVVNDRFNAMV--GLNNTVERRDRVVQQIETYFADVDMIL 58

Query: 63  SELARHVDNSQVDFSMLASLAREVHDKSTSIGTEHMRLASLDVITACDDRRKLRFDHTLP 122
           +E++    NS  DFS  ASLAR+V DKS SIG E+MR+A  + + ACD+  K+  D TL 
Sbjct: 59  AEISLDFANSAFDFSKFASLARQVEDKSESIGAEYMRIACPEFVKACDEMNKIMLDLTLL 118

Query: 123 LLNSEFEYTRRQLSYFVRLERDVIRLE 149
            +  +F  T+R+L  FV++ER +IRLE
Sbjct: 119 WVKHQFATTKRKLETFVQMERRIIRLE 145


>Medtr2g085155.1 | histidine containing phosphotransfer protein,
           putative | LC | chr2:36154734-36152191 | 20130731
          Length = 175

 Score =  123 bits (309), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 26/171 (15%)

Query: 3   MRLRIRQGLLQGHLNRMFDEEVVNSQFSTILWCPRNNRDRARDHAVQLIESYLADVDVIL 62
           M + I +GL+QG+L+ + DE VVN +F+ I+ C  N  +R R+  VQ IE+Y ADVD+IL
Sbjct: 1   MTMAILKGLMQGYLSALLDEGVVNDRFNAIV-CLNNTVER-RERVVQQIETYFADVDMIL 58

Query: 63  SELARHVDNSQVDFSMLASLAREVHDKST------------------------SIGTEHM 98
           +E++  VDNS  DFS LASLAR++ +KS                          IG EHM
Sbjct: 59  TEISLDVDNSAFDFSRLASLARQIEEKSDRNWYINAGKWGRILFDYRTVEALRGIGAEHM 118

Query: 99  RLASLDVITACDDRRKLRFDHTLPLLNSEFEYTRRQLSYFVRLERDVIRLE 149
           RLA  + I ACD+  K     TL  +  EF  T+R+L  FV++ER +IRLE
Sbjct: 119 RLACPEFIKACDEMNKRMLSRTLLWVKHEFANTKRKLEAFVQMERRIIRLE 169