Miyakogusa Predicted Gene

Lj3g3v1145880.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1145880.3 Non Characterized Hit- tr|F6HHH5|F6HHH5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,41.67,8e-17,no
description,Signal transduction histidine kinase, phosphotransfer
(Hpt) domain; Histidine-contain,CUFF.42290.3
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086010.1 | histidine containing phosphotransfer protein, ...   115   9e-27
Medtr2g085155.1 | histidine containing phosphotransfer protein, ...   114   2e-26
Medtr1g082290.1 | histidine phosphotransfer protein | HC | chr1:...    57   4e-09
Medtr2g020770.1 | histidine phosphotransfer protein | HC | chr2:...    50   4e-07
Medtr2g020770.2 | histidine phosphotransfer protein | HC | chr2:...    49   1e-06
Medtr7g114020.1 | histidine phosphotransfer protein | HC | chr7:...    47   4e-06
Medtr7g114020.2 | histidine phosphotransfer protein | HC | chr7:...    47   4e-06

>Medtr2g086010.1 | histidine containing phosphotransfer protein,
           putative | HC | chr2:36160457-36157114 | 20130731
          Length = 151

 Score =  115 bits (288), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%)

Query: 14  RDHAVQLIETYLADVDMILSELSLHVDNSQVDLYMLATLAHEIQDKSTSIGAEHMTVACF 73
           RD  VQ IETY ADVDMIL+E+SL   NS  D    A+LA +++DKS SIGAE+M +AC 
Sbjct: 40  RDRVVQQIETYFADVDMILAEISLDFANSAFDFSKFASLARQVEDKSESIGAEYMRIACP 99

Query: 74  DVIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLVQMEKR 114
           + +KAC+E  K     TL W+KH+F  TK KL + VQME+R
Sbjct: 100 EFVKACDEMNKIMLDLTLLWVKHQFATTKRKLETFVQMERR 140


>Medtr2g085155.1 | histidine containing phosphotransfer protein,
           putative | LC | chr2:36154734-36152191 | 20130731
          Length = 175

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 24/125 (19%)

Query: 14  RDHAVQLIETYLADVDMILSELSLHVDNSQVDLYMLATLAHEIQDKS------------- 60
           R+  VQ IETY ADVDMIL+E+SL VDNS  D   LA+LA +I++KS             
Sbjct: 40  RERVVQQIETYFADVDMILTEISLDVDNSAFDFSRLASLARQIEEKSDRNWYINAGKWGR 99

Query: 61  -----------TSIGAEHMTVACFDVIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLV 109
                        IGAEHM +AC + IKAC+E  K+  S+TL W+KHEF NTK KL + V
Sbjct: 100 ILFDYRTVEALRGIGAEHMRLACPEFIKACDEMNKRMLSRTLLWVKHEFANTKRKLEAFV 159

Query: 110 QMEKR 114
           QME+R
Sbjct: 160 QMERR 164


>Medtr1g082290.1 | histidine phosphotransfer protein | HC |
           chr1:36582989-36581199 | 20130731
          Length = 152

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 58/108 (53%)

Query: 6   ECLMRDRARDHAVQLIETYLADVDMILSELSLHVDNSQVDLYMLATLAHEIQDKSTSIGA 65
           E L  ++  D  VQ+I  +  D + +L EL+  +   ++D   +    H+++  S+SIGA
Sbjct: 32  EQLQDEKNPDFVVQVITLFFDDAERLLKELTTSLSQEKIDFKRMDAHVHQLKGSSSSIGA 91

Query: 66  EHMTVACFDVIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLVQMEK 113
           + +  AC      C E+  +   ++L  +KHE+   K+KL +L +ME+
Sbjct: 92  QRVQKACISFRDFCTEQNVEGCLKSLQQVKHEYSLVKSKLQTLFKMEE 139


>Medtr2g020770.1 | histidine phosphotransfer protein | HC |
           chr2:6971467-6968954 | 20130731
          Length = 153

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%)

Query: 15  DHAVQLIETYLADVDMILSELSLHVDNSQVDLYMLATLAHEIQDKSTSIGAEHMTVACFD 74
           +   +++  +  D + IL +LS  VD   +D   +    H+ +  S SIGA+ +  +C  
Sbjct: 40  EFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKNSCVA 99

Query: 75  VIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLVQMEKR 114
               CEE+      + L  +K E+   KNKL +L+++E++
Sbjct: 100 FRNFCEEQNIDACRRCLQQVKQEYLLVKNKLETLLRLEQQ 139


>Medtr2g020770.2 | histidine phosphotransfer protein | HC |
           chr2:6971467-6968958 | 20130731
          Length = 144

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%)

Query: 15  DHAVQLIETYLADVDMILSELSLHVDNSQVDLYMLATLAHEIQDKSTSIGAEHMTVACFD 74
           +   +++  +  D + IL +LS  VD   +D   +    H+ +  S SIGA+ +  +C  
Sbjct: 40  EFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKNSCVA 99

Query: 75  VIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLVQMEK 113
               CEE+      + L  +K E+   KNKL +L+++ K
Sbjct: 100 FRNFCEEQNIDACRRCLQQVKQEYLLVKNKLETLLRVSK 138


>Medtr7g114020.1 | histidine phosphotransfer protein | HC |
           chr7:47026918-47029559 | 20130731
          Length = 147

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 8   LMRDRARDH-AVQLIETYLADVDMILSELSLHVDN-SQVDLYMLATLAHEIQDKSTSIGA 65
           L++D +  +  V+++  +  D + +L++L   +   + +D   +  L H+++  S+SIGA
Sbjct: 29  LLQDESNPNFVVEVVTLFFEDAEKLLNQLEKEIGQENNIDFKRVDALVHQLKGSSSSIGA 88

Query: 66  EHMTVACFDVIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLVQMEKR 114
           + +   C      CEE+  +   ++L  +K E+   K K  +L +ME++
Sbjct: 89  QRVQRVCIAFKNYCEEKNIEGCFKSLQDIKQEYTLVKTKFETLFKMEQQ 137


>Medtr7g114020.2 | histidine phosphotransfer protein | HC |
           chr7:47026918-47029678 | 20130731
          Length = 147

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 8   LMRDRARDH-AVQLIETYLADVDMILSELSLHVDN-SQVDLYMLATLAHEIQDKSTSIGA 65
           L++D +  +  V+++  +  D + +L++L   +   + +D   +  L H+++  S+SIGA
Sbjct: 29  LLQDESNPNFVVEVVTLFFEDAEKLLNQLEKEIGQENNIDFKRVDALVHQLKGSSSSIGA 88

Query: 66  EHMTVACFDVIKACEERRKKRFSQTLTWLKHEFDNTKNKLSSLVQMEKR 114
           + +   C      CEE+  +   ++L  +K E+   K K  +L +ME++
Sbjct: 89  QRVQRVCIAFKNYCEEKNIEGCFKSLQDIKQEYTLVKTKFETLFKMEQQ 137