Miyakogusa Predicted Gene

Lj3g3v1133730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1133730.1 Non Characterized Hit- tr|A2XT48|A2XT48_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,64.41,0.000000000000004,seg,NULL; Transcrip_act,Golgin,
RAB6-interacting; SUBFAMILY NOT NAMED,NULL; NTKL-BINDING PROTEIN
1,G,CUFF.42279.1
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g085025.1 | transcriptional activator | HC | chr2:36084531...   256   5e-69
Medtr7g104020.1 | transcriptional activator | HC | chr7:42066185...   201   4e-52
Medtr7g104020.2 | transcriptional activator | HC | chr7:42066183...   196   1e-50
Medtr1g492930.1 | transcriptional activator | HC | chr1:41674617...   167   4e-42

>Medtr2g085025.1 | transcriptional activator | HC |
           chr2:36084531-36082513 | 20130731
          Length = 174

 Score =  256 bits (655), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 142/177 (80%), Positives = 156/177 (88%), Gaps = 3/177 (1%)

Query: 1   MATPKRSYSYDLXXXXXXXXXXVKNSGMISSDQSPRIDDKEEEMSRSALAMFRAKEEEIE 60
           MATPKRSY              VKNSGMI++ QSPR D+KEEEMSRS LAMFR KEEEIE
Sbjct: 1   MATPKRSYDQ---QQQLQIVQHVKNSGMINNIQSPRRDEKEEEMSRSVLAMFREKEEEIE 57

Query: 61  RRKMEVRDKVHAHLGRVETETKRLAEIREELEGFTDPMRKEVGIVRKKIDMVNKELKPLG 120
           RRK+EVRDKVHAHLGRVE ETKRLAEIREE+EGFTDP RK+V IVRK+IDMVNKELKPLG
Sbjct: 58  RRKLEVRDKVHAHLGRVEKETKRLAEIREEIEGFTDPKRKDVAIVRKRIDMVNKELKPLG 117

Query: 121 QTCQKKEREYHEALEAFNDKNREKAQLVTKLVELVTESERLRMKKLDELSKNIDTLH 177
           QTCQKKEREY+EALEAFN+KN+EKAQLVTKLVELVTESER+RMKKL++LSKNID+LH
Sbjct: 118 QTCQKKEREYNEALEAFNEKNKEKAQLVTKLVELVTESERIRMKKLEDLSKNIDSLH 174


>Medtr7g104020.1 | transcriptional activator | HC |
           chr7:42066185-42063589 | 20130731
          Length = 168

 Score =  201 bits (510), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 2/155 (1%)

Query: 23  VKNSGMISSDQSPRIDDKEEEMSRSALAMFRAKEEEIERRKMEVRDKVHAHLGRVETETK 82
           V+NSG +S   S  +  ++EEMSRSAL+ FRAKEEEIE++KMEVRDKV   LGRVE ETK
Sbjct: 14  VQNSGSLSF--SSHLSKEDEEMSRSALSTFRAKEEEIEKKKMEVRDKVQFQLGRVEEETK 71

Query: 83  RLAEIREELEGFTDPMRKEVGIVRKKIDMVNKELKPLGQTCQKKEREYHEALEAFNDKNR 142
           RLA IREELE   DPMRKEV +VRK+ID VNKELKPLG TCQKKE+EY +ALEAFN+KNR
Sbjct: 72  RLATIREELEALADPMRKEVSLVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKNR 131

Query: 143 EKAQLVTKLVELVTESERLRMKKLDELSKNIDTLH 177
           EK QL+TKL+ELV ESERLRMKKL+ELSKNID++ 
Sbjct: 132 EKVQLITKLMELVGESERLRMKKLEELSKNIDSMQ 166


>Medtr7g104020.2 | transcriptional activator | HC |
           chr7:42066183-42063701 | 20130731
          Length = 171

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/158 (71%), Positives = 131/158 (82%), Gaps = 5/158 (3%)

Query: 23  VKNSGMISSDQSPRIDDKEEEMSRSALAMFRAKEEEIERRKMEVRDKVHAHLGRVETETK 82
           V+NSG +S   S  +  ++EEMSRSAL+ FRAKEEEIE++KMEVRDKV   LGRVE ETK
Sbjct: 14  VQNSGSLSF--SSHLSKEDEEMSRSALSTFRAKEEEIEKKKMEVRDKVQFQLGRVEEETK 71

Query: 83  RLAEIREE---LEGFTDPMRKEVGIVRKKIDMVNKELKPLGQTCQKKEREYHEALEAFND 139
           RLA IREE   LE   DPMRKEV +VRK+ID VNKELKPLG TCQKKE+EY +ALEAFN+
Sbjct: 72  RLATIREEYQELEALADPMRKEVSLVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNE 131

Query: 140 KNREKAQLVTKLVELVTESERLRMKKLDELSKNIDTLH 177
           KNREK QL+TKL+ELV ESERLRMKKL+ELSKNID++ 
Sbjct: 132 KNREKVQLITKLMELVGESERLRMKKLEELSKNIDSMQ 169


>Medtr1g492930.1 | transcriptional activator | HC |
           chr1:41674617-41673441 | 20130731
          Length = 162

 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 118/157 (75%), Gaps = 5/157 (3%)

Query: 23  VKNSGMISSDQSPRIDDKE---EEMSRSALAMFRAKEEEIERRKMEVRDKVHAHLGRVET 79
           +KN G I S  S R   +E   E++S+ A++  +AKEEEIERRKMEV+++V   LGR E 
Sbjct: 4   MKNLGSIGS--SGRFSTEECEDEDVSKLAISTLQAKEEEIERRKMEVKERVELQLGRAEE 61

Query: 80  ETKRLAEIREELEGFTDPMRKEVGIVRKKIDMVNKELKPLGQTCQKKEREYHEALEAFND 139
           ET+RLA I EELE   DPMRKEV +VRKKID+ NK++K LGQ  QKKE+EY EALEAFN+
Sbjct: 62  ETRRLAHIWEELEVMEDPMRKEVAMVRKKIDLANKDVKQLGQNYQKKEKEYKEALEAFNE 121

Query: 140 KNREKAQLVTKLVELVTESERLRMKKLDELSKNIDTL 176
           KN+EK  LV  L E++ ESER+RMKKL+EL K I+++
Sbjct: 122 KNKEKNHLVATLTEMLAESERIRMKKLEELCKTIESV 158