Miyakogusa Predicted Gene

Lj3g3v1131280.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1131280.2 Non Characterized Hit- tr|I1LTQ5|I1LTQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1492
PE=,96.28,0,Adaptin_N,Clathrin/coatomer adaptor, adaptin-like,
N-terminal; no description,Armadillo-like helical,CUFF.42271.2
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084610.1 | adaptor protein complex AP-2, alpha subunit | ...   432   e-122
Medtr5g034780.1 | AP-1 complex subunit gamma-2 | HC | chr5:15085...   132   2e-31
Medtr8g063690.1 | AP-1 complex subunit gamma-2 | HC | chr8:26695...   123   1e-28
Medtr8g072250.1 | AP-4 complex subunit epsilon | HC | chr8:30504...    84   7e-17

>Medtr2g084610.1 | adaptor protein complex AP-2, alpha subunit | HC
           | chr2:35817582-35830646 | 20130731
          Length = 1026

 Score =  432 bits (1112), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/216 (95%), Positives = 212/216 (98%)

Query: 1   MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSL 60
           MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQII+SL
Sbjct: 310 MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIITSL 369

Query: 61  TDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD 120
            DPDISIRRRALDLLYGMCDV+NAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD
Sbjct: 370 KDPDISIRRRALDLLYGMCDVTNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD 429

Query: 121 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVK 180
           LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDL+PYAA KAREYLD PAIHETMVK
Sbjct: 430 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAAAKAREYLDKPAIHETMVK 489

Query: 181 VSAYILGEFGHLLVRRPGCSPKEIFNIIHEKLPTVS 216
           VSAY+LGEFGHLL RRPGCSPKEIF+IIHEKLPTVS
Sbjct: 490 VSAYLLGEFGHLLGRRPGCSPKEIFSIIHEKLPTVS 525


>Medtr5g034780.1 | AP-1 complex subunit gamma-2 | HC |
           chr5:15085660-15099803 | 20130731
          Length = 872

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 116/185 (62%), Gaps = 2/185 (1%)

Query: 14  VALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALD 73
           + +LG+F++ R+ NIRY+ L NM    +  D Q  ++RH+A I+  + D D SIR+RAL+
Sbjct: 314 INILGRFLSNRDNNIRYVAL-NMLMRAVTADAQ-AVQRHRATILECVKDLDASIRKRALE 371

Query: 74  LLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLID 133
           L+Y + + +N K +V++L+ YL  ++   R +L+ K   +  KF+P+  WY+D +L+++ 
Sbjct: 372 LVYVLVNETNVKPLVKDLVDYLEVSDLDFRGDLTTKICSIVAKFSPEKIWYIDQMLKVLT 431

Query: 134 KAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVKVSAYILGEFGHLL 193
           +AG+FV D++W+ ++  ++N  +L  Y+           A  ET+V+V+ + +GE+G +L
Sbjct: 432 EAGNFVKDEVWYALIVVISNASELHGYSVRALYRAFQTSAEQETLVRVTVWCIGEYGDML 491

Query: 194 VRRPG 198
           V   G
Sbjct: 492 VHNVG 496


>Medtr8g063690.1 | AP-1 complex subunit gamma-2 | HC |
           chr8:26695004-26682711 | 20130731
          Length = 855

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 109/181 (60%), Gaps = 2/181 (1%)

Query: 14  VALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALD 73
           + +LG+F++ R+ N RY+ L NM    +  D Q  ++RH+A I+  + D D SIR+RAL+
Sbjct: 314 INILGRFLSNRDNNTRYVAL-NMLMKAVSADTQ-AVQRHRATILECVKDSDASIRKRALE 371

Query: 74  LLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLID 133
           L+Y + + +N K + +EL+ YL  ++   RE+L+ K   +  KF+ +  WY+D +++++ 
Sbjct: 372 LIYVLVNETNVKPLTKELVDYLEVSDQDFREDLTTKICSIVSKFSLEKIWYIDQMVKVLS 431

Query: 134 KAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVKVSAYILGEFGHLL 193
           KAG+F+ D++W  ++  ++N   L  Y      +        ET V+V+ + LGE+G LL
Sbjct: 432 KAGNFLKDEVWHALIVVISNASKLHGYTVRALYKAFQTSTEQETFVRVAMWCLGEYGDLL 491

Query: 194 V 194
           +
Sbjct: 492 I 492


>Medtr8g072250.1 | AP-4 complex subunit epsilon | HC |
           chr8:30504786-30516981 | 20130731
          Length = 978

 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 104/193 (53%), Gaps = 12/193 (6%)

Query: 8   EMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISI 67
           +++     ++ KF+     N++Y+G++ + R++ ++ +  I ++HQ  +I  L DPD ++
Sbjct: 321 KLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPL--IAEQHQLAVIDCLEDPDDTL 378

Query: 68  RRRALDLLYGMCDVSNAKDIVEELLQYL-STAEFAMREELSLKAAILAEKFAPDLSWYVD 126
           +R+  +LLY M   SN + IV+ +++Y+ S ++   +  ++ +   LAE+FAP   W++ 
Sbjct: 379 KRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQ 438

Query: 127 VILQLIDKAGDFVSDDIWFRVVQFVTN--NED-------LRPYAAVKAREYLDNPAIHET 177
            + ++ + AGD V+  +   +++ +     ED       LR  A       +  P +   
Sbjct: 439 TMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAAYSQLRSSAVESYLRIIGEPKLPSV 498

Query: 178 MVKVSAYILGEFG 190
            ++V  ++LGE+G
Sbjct: 499 FLQVICWVLGEYG 511