Miyakogusa Predicted Gene

Lj3g3v1131280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1131280.1 Non Characterized Hit- tr|I1LTQ5|I1LTQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1492 PE=,97.86,0,ARM
repeat,Armadillo-type fold; Adaptin_N,Clathrin/coatomer adaptor,
adaptin-like, N-terminal; no de,CUFF.42271.1
         (481 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084610.1 | adaptor protein complex AP-2, alpha subunit | ...   961   0.0  
Medtr5g034780.1 | AP-1 complex subunit gamma-2 | HC | chr5:15085...   247   2e-65
Medtr8g063690.1 | AP-1 complex subunit gamma-2 | HC | chr8:26695...   240   2e-63
Medtr8g072250.1 | AP-4 complex subunit epsilon | HC | chr8:30504...   183   4e-46
Medtr8g104380.1 | adaptin amine-terminal region protein | HC | c...    95   2e-19

>Medtr2g084610.1 | adaptor protein complex AP-2, alpha subunit | HC
           | chr2:35817582-35830646 | 20130731
          Length = 1026

 Score =  961 bits (2484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/465 (98%), Positives = 463/465 (99%)

Query: 1   MAMSGMRGLSVFISDIRNCQNKDQERLRVDKELGNIRTRFKNEKALTPYEKKKYVWKMLY 60
           MAMSGMRGLSVFISDIRNCQNK+QERLRVDKELGNIRTRFKNEKALTPYEKKKYVWKMLY
Sbjct: 1   MAMSGMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKNEKALTPYEKKKYVWKMLY 60

Query: 61  IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRN 120
           IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRN
Sbjct: 61  IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRN 120

Query: 121 ETFQCLALTMVGNIGGREFAESLAPDVQKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVN 180
           ETFQCLALTMVGNIGGREFAESLAPDVQKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVN
Sbjct: 121 ETFQCLALTMVGNIGGREFAESLAPDVQKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVN 180

Query: 181 VDGWADRMAQLLDERDLGVLTSSMSLLVALVSNQHEGYWSCLPKCVKTLERLARNQDIPQ 240
           VDGWADRMAQLLDERDLGVLTSSMSLLVALVSNQHE YWSCLPKCVKTLERLARNQDIPQ
Sbjct: 181 VDGWADRMAQLLDERDLGVLTSSMSLLVALVSNQHEAYWSCLPKCVKTLERLARNQDIPQ 240

Query: 241 EYTYYGIPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHA 300
           EYTYYGIPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHA
Sbjct: 241 EYTYYGIPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHA 300

Query: 301 VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKR 360
           VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKR
Sbjct: 301 VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKR 360

Query: 361 HQAQIISSLTDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAA 420
           HQAQII+SL DPDISIRRRALDLLYGMCDV+NAKDIVEELLQYLSTAEFAMREELSLKAA
Sbjct: 361 HQAQIITSLKDPDISIRRRALDLLYGMCDVTNAKDIVEELLQYLSTAEFAMREELSLKAA 420

Query: 421 ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNED 465
           ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNED
Sbjct: 421 ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNED 465


>Medtr5g034780.1 | AP-1 complex subunit gamma-2 | HC |
           chr5:15085660-15099803 | 20130731
          Length = 872

 Score =  247 bits (631), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 261/464 (56%), Gaps = 23/464 (4%)

Query: 4   SGMRGLSVFISDIRNCQNKDQERLRVDKELGNIRTRF-KNEKALTPYEKKKYVWKMLYIY 62
           SG R L   I  IR C+   +ER  V KE   IR    +N++      + + + K+++I+
Sbjct: 6   SGTR-LRDMIRAIRACKTAAEERGVVRKECAAIRASINENDQDY----RHRNMAKLMFIH 60

Query: 63  MLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRNET 122
           MLGY   FG ME + LI++P +PEK++GY+    LL+E  + L L  N+++ D+   N+ 
Sbjct: 61  MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQY 120

Query: 123 FQCLALTMVGNIGGREFAESLAPDVQKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVNVD 182
              LAL  +GNI   E A  LAP+V++LL      P +RKKAALC +R+ +K PD+   +
Sbjct: 121 IVGLALCALGNICSAEMARDLAPEVERLLQFRD--PNIRKKAALCSIRIIKKVPDLA--E 176

Query: 183 GWADRMAQLLDERDLGVLTSSMSLLVALVSNQHEGYWSCLPKC----VKTLERLARNQDI 238
            + +    LL E+  GVL + + L   L     E       KC    V+TL+ LA +   
Sbjct: 177 NFINPATSLLREKHHGVLITGVQLCTDLCKTSTEALEHIRKKCTDGLVRTLKDLANSPYS 236

Query: 239 PQEYTYYGIPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNAS 298
           P EY   GI  P+L ++ ++ L+      D +   S+ ++L ++   T+  K      A 
Sbjct: 237 P-EYDIAGITDPFLHIRLLKLLRVLGE-GDADASDSMNDILAQVATKTESNKV-----AG 289

Query: 299 HAVLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDII 358
           +A+L+E +  +M ++    +    + +LG+F++ R+ NIRY+ L NM    +  D Q  +
Sbjct: 290 NAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVAL-NMLMRAVTADAQ-AV 347

Query: 359 KRHQAQIISSLTDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLK 418
           +RH+A I+  + D D SIR+RAL+L+Y + + +N K +V++L+ YL  ++   R +L+ K
Sbjct: 348 QRHRATILECVKDLDASIRKRALELVYVLVNETNVKPLVKDLVDYLEVSDLDFRGDLTTK 407

Query: 419 AAILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTN 462
              +  KF+P+  WY+D +L+++ +AG+FV D++W+ ++  ++N
Sbjct: 408 ICSIVAKFSPEKIWYIDQMLKVLTEAGNFVKDEVWYALIVVISN 451


>Medtr8g063690.1 | AP-1 complex subunit gamma-2 | HC |
           chr8:26695004-26682711 | 20130731
          Length = 855

 Score =  240 bits (612), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 255/456 (55%), Gaps = 22/456 (4%)

Query: 12  FISDIRNCQNKDQERLRVDKELGNIRTRF-KNEKALTPYEKKKYVWKMLYIYMLGYDVDF 70
            I  IR C+   +ER  V KE   IR    +N++    + + + + K+++I+MLGY   F
Sbjct: 13  MIRAIRACKTAAEERTVVRKECAAIRASIDENDQ----HYRHRNMSKLMFIHMLGYPTHF 68

Query: 71  GHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRNETFQCLALTM 130
           G ME + LIS+P +PEK++GY+    L++E  + L L  N+++ D+   N+    LAL  
Sbjct: 69  GQMECLKLISSPGFPEKRIGYLGLMLLVDERQEVLMLVTNSLKQDLNHTNQYIVGLALCA 128

Query: 131 VGNIGGREFAESLAPDVQKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVNVDGWADRMAQ 190
           +GNI   E A  LAP+V++LL      P +RKKAALC +R+ +K PD+   + + +    
Sbjct: 129 LGNICSAEMARDLAPEVERLLQFRD--PNIRKKAALCSIRIIKKVPDLA--ENFVNPATG 184

Query: 191 LLDERDLGVLTSSMSLLVALVSNQHEGYWSCLPKC----VKTLERLARNQDIPQEYTYYG 246
           LL E+  GVL + + L   L     E       KC    V+TL+ LA +   P EY   G
Sbjct: 185 LLREKHHGVLITGVQLCTELCKISSEALEHIRKKCTEGLVRTLKDLANSSYSP-EYDIAG 243

Query: 247 IPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHAVLFEAL 306
           I  P+L +K +R L+      D +   S+ ++L ++   T+  K      A +A+L+E +
Sbjct: 244 ITDPFLHIKLLRLLREL-GEGDADASDSMNDILAQVATKTESNKV-----AGNAILYECV 297

Query: 307 ALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQII 366
             +M ++    +    + +LG+F++ R+ N RY+ L NM    +  D Q  ++RH+A I+
Sbjct: 298 QTIMSIEDNGGLRVLAINILGRFLSNRDNNTRYVAL-NMLMKAVSADTQ-AVQRHRATIL 355

Query: 367 SSLTDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKF 426
             + D D SIR+RAL+L+Y + + +N K + +EL+ YL  ++   RE+L+ K   +  KF
Sbjct: 356 ECVKDSDASIRKRALELIYVLVNETNVKPLTKELVDYLEVSDQDFREDLTTKICSIVSKF 415

Query: 427 APDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTN 462
           + +  WY+D +++++ KAG+F+ D++W  ++  ++N
Sbjct: 416 SLEKIWYIDQMVKVLSKAGNFLKDEVWHALIVVISN 451


>Medtr8g072250.1 | AP-4 complex subunit epsilon | HC |
           chr8:30504786-30516981 | 20130731
          Length = 978

 Score =  183 bits (464), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 244/453 (53%), Gaps = 19/453 (4%)

Query: 12  FISDIRNCQNKDQERLRVDKELGNIRTRFKNEKALTPYEKKKYVWKMLYIYMLGYDVDFG 71
            I  I   ++K +E   V +E+  ++ R  +E  +   + K+Y+ ++LY+ MLG+D  FG
Sbjct: 28  LIKSIGESRSKAEEDRIVIREIETLKRRI-SEPDIPKRKMKEYIIRLLYVEMLGHDASFG 86

Query: 72  HMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRNETFQCLALTMV 131
           ++ AV +      P K+ GY+  +  LN++HD + L +NT++ D+   N    C AL  V
Sbjct: 87  YIHAVKMTHDDNLPSKRTGYLAVTLFLNDDHDLIILIVNTIQKDLKSDNYLVVCAALNAV 146

Query: 132 GNIGGREFAESLAPDVQKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVN--VDGWADRMA 189
             +   E   ++ P V +LL  S  +  VRKKA + L   +RK+   V+  V  +  R+ 
Sbjct: 147 CRLINEETIPAVLPLVVELL--SHGKEAVRKKAVMALHSFHRKSSSSVSHLVANFRKRLC 204

Query: 190 QLLDERDLGVLTSSMSLLVALVSNQHEGYWSCLPKCVKTLERLARNQDIPQEYTYYGIPS 249
               + D GV+ +++  L  L+++    Y   +   V  L+++A ++ +P+ Y Y+ +P+
Sbjct: 205 ----DNDPGVMGATLCPLFDLITDDPNPYKDLVVSFVSILKQVAEHR-LPKSYDYHQMPA 259

Query: 250 PWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHAVLFEALALV 309
           P++Q+K ++ L    +  D ++   ++ V+  I+   D   N+      +A+L+E++  V
Sbjct: 260 PFVQIKLLKILALLGS-GDKSSSEHMYTVIGDIIRKGDSSSNIG-----NAILYESIRCV 313

Query: 310 MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSL 369
             +    +++     ++ KF+     N++Y+G++ + R++ ++ +  I ++HQ  +I  L
Sbjct: 314 SSIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPL--IAEQHQLAVIDCL 371

Query: 370 TDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYL-STAEFAMREELSLKAAILAEKFAP 428
            DPD +++R+  +LLY M   SN + IV+ +++Y+ S ++   +  ++ +   LAE+FAP
Sbjct: 372 EDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAP 431

Query: 429 DLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVT 461
              W++  + ++ + AGD V+  +   +++ + 
Sbjct: 432 SNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIA 464


>Medtr8g104380.1 | adaptin amine-terminal region protein | HC |
           chr8:43962481-43965819 | 20130731
          Length = 968

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 178/422 (42%), Gaps = 49/422 (11%)

Query: 29  VDKELGNIRTRFKNEKALTPYEKKKYVWKMLYIYML-GYDVDFGHMEAVSLISAPKYPEK 87
           + K +  IR   K   +  P  K   + K+ Y+  + G D+ +     V ++S+  +  K
Sbjct: 36  ISKSIEEIRREIK---STDPQTKSTALQKLTYLSSIHGIDMSWASFHVVEVMSSSLFLHK 92

Query: 88  QVGYIVTSSLLNENHDFLRLAINTVRNDIIGRNETFQCLALTMVGNIGGREFAESLAPDV 147
           ++GY   S   N++   L L  N +R D+   N     LAL  +  I   + A  L PD+
Sbjct: 93  RIGYHAASVSFNDSTPVLLLITNQLRKDLSSTNHFHASLALHCLSTIATLDLARDLTPDI 152

Query: 148 QKLLLSSSCRPLVRKKAALCLLRLYRKNPDVVNVDGWADRMAQLLDERDLGVLTSSMSLL 207
             LL  SS R  +R KA   +LR++ K PD V V     R+ + L+  D  V+ + + + 
Sbjct: 153 FNLL--SSSRVFIRNKAIAVVLRVFDKYPDAVRV--CFKRLVENLESSDPKVVIAVIGVF 208

Query: 208 VALVSNQHEGYWSCLPKCVKTLERLARNQDIPQEYTYYGIPSPWLQVKTMRALQYFPTIE 267
             L S     Y    P+  + L     N               W+ +K ++       +E
Sbjct: 209 CELSSKDPRSYLPLAPEFYRILVDSKNN---------------WVLIKVLKIFARLAPLE 253

Query: 268 DPNTRRSLFEVLQRILMGTDVVKNVNKNNASHAVLFEAL-ALVMHLDAEKEMMSQCVALL 326
               +R +  + + I           + + + +++FE +  ++  L   +  +   V  +
Sbjct: 254 PRLGKRIVEPICEHI-----------RRSGAKSLVFECVRTVITSLSDHESAVKLAVTKI 302

Query: 327 GKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALDLLYG 386
            + +  ++PN+RYLGL  ++ +     +  +++   A +I SL D D +I+  +L LL  
Sbjct: 303 RELLVDQDPNLRYLGLHALS-VAAPKHLWAVLENKDA-VIKSLDDEDSNIKIESLRLLMA 360

Query: 387 MCDVSNAKDIVEELLQYL--STAEFAMREELSLKAAILAE------KFAPDLSWYVDVIL 438
           M   SN  +I   LL Y   S  EF       +  +IL        +   D  WYV ++ 
Sbjct: 361 MVSESNVVEISRVLLNYALKSDPEFCNE----ILGSILTTCGRNLYEIIVDFDWYVSLLG 416

Query: 439 QL 440
           ++
Sbjct: 417 EM 418