Miyakogusa Predicted Gene

Lj3g3v1128930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1128930.1 tr|Q9ZUY6|Q9ZUY6_ARATH At2g27860/F15K20.4
OS=Arabidopsis thaliana GN=AXS1 PE=2 SV=1,93.33,5e-18,
,NODE_17711_length_517_cov_780.570618.path1.1
         (45 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g056100.1 | UDP-D-apiose/UDP-D-xylose synthase | HC | chr4...    87   2e-18
Medtr1g108530.1 | UDP-D-apiose/UDP-D-xylose synthase | HC | chr1...    83   6e-17
Medtr4g053420.1 | UDP-D-apiose/UDP-D-xylose synthase | HC | chr4...    68   2e-12
Medtr1g107455.1 | UDP-D-apiose/UDP-D-xylose synthase | HC | chr1...    61   3e-10

>Medtr4g056100.1 | UDP-D-apiose/UDP-D-xylose synthase | HC |
           chr4:20490832-20487612 | 20130731
          Length = 390

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/45 (88%), Positives = 43/45 (95%)

Query: 1   MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKAIAKPIAS 45
           MTIIN+QL WNPKTSLWDLLESTLTYQHRTYAEA+KK IA+PIAS
Sbjct: 346 MTIINKQLEWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAQPIAS 390


>Medtr1g108530.1 | UDP-D-apiose/UDP-D-xylose synthase | HC |
           chr1:49051517-49052689 | 20130731
          Length = 372

 Score = 82.8 bits (203), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/45 (84%), Positives = 42/45 (93%)

Query: 1   MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKAIAKPIAS 45
           MTIIN+QLGWNPKTSL DLLESTLTYQH+TYAEA+KK IA+ IAS
Sbjct: 328 MTIINKQLGWNPKTSLEDLLESTLTYQHKTYAEAIKKVIAQTIAS 372


>Medtr4g053420.1 | UDP-D-apiose/UDP-D-xylose synthase | HC |
           chr4:19388173-19390689 | 20130731
          Length = 381

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/42 (69%), Positives = 36/42 (85%)

Query: 1   MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKAIAKP 42
           MTII +QLGW PKTSL DLL+STL YQH+TY+ A+KK ++KP
Sbjct: 338 MTIITKQLGWKPKTSLDDLLDSTLQYQHQTYSHAIKKELSKP 379


>Medtr1g107455.1 | UDP-D-apiose/UDP-D-xylose synthase | HC |
           chr1:48752813-48754015 | 20130731
          Length = 377

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/29 (89%), Positives = 28/29 (96%)

Query: 1   MTIINRQLGWNPKTSLWDLLESTLTYQHR 29
           MTIIN+QLGWNPKTSL DLLESTLTYQH+
Sbjct: 346 MTIINKQLGWNPKTSLEDLLESTLTYQHK 374