Miyakogusa Predicted Gene

Lj3g3v1126810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1126810.1 Non Characterized Hit- tr|A5AU85|A5AU85_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.37,0.00000000001,seg,NULL,CUFF.42246.1
         (505 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084580.1 | ARM repeat-like protein | HC | chr2:35781712-3...   729   0.0  

>Medtr2g084580.1 | ARM repeat-like protein | HC |
           chr2:35781712-35788279 | 20130731
          Length = 524

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/525 (72%), Positives = 417/525 (79%), Gaps = 25/525 (4%)

Query: 1   MAVPADPAIXXXXXXXH-----SGPTHHPSAPSHEFFDLSTTVDPSYIISLIRKLLPSDS 55
           MAV  +P+I             +GPTHHPS PSHEFFDLSTTVDPSYIISLIRKLLP DS
Sbjct: 1   MAVQTNPSIEEEEEEEEHEHEHNGPTHHPSPPSHEFFDLSTTVDPSYIISLIRKLLPLDS 60

Query: 56  AS----------------EEGDAPPSASAANGEHIESSMKKSENMDVDVSSEFSDRRREC 99
           +S                ++ +  PSAS  N EHIE S   SENMDVDVS E S  R EC
Sbjct: 61  SSVNQVVSDDPNRGSITDDKEEEAPSASICNNEHIELSKSTSENMDVDVSCESSHTRGEC 120

Query: 100 QGRGDDGFGVRNSGVSVGEDPWEECGCVLWDLAASRTHAELMVENLILEVLLANLGVCNS 159
           Q  GD   GV   G SVGED WEE GC+LWDLAAS+THAELMVENLILEVL ANL  C S
Sbjct: 121 QDTGD---GVERFGASVGEDAWEEYGCILWDLAASKTHAELMVENLILEVLYANLIACKS 177

Query: 160 MRVTEISIGIIGNLACHEVPMKHIVSTKGLIDTIVDKLFLDDPQGLCETCRLLTVGLQSG 219
            RVTEISIGIIGNLACHEVP+  IVSTKGLI+ IV+KLFLDDPQ LCETCRLLTVGLQSG
Sbjct: 178 ERVTEISIGIIGNLACHEVPLNQIVSTKGLIEIIVEKLFLDDPQCLCETCRLLTVGLQSG 237

Query: 220 ESITWAEALQSEHILCQILWIAENTLNLQLLEKSVGLILAILEGQAKVVDALLPPLMKLG 279
           ESI WAEALQSEHILCQILWIAENTLNLQLLEKSVGLILAILE Q K +D LLPP++KLG
Sbjct: 238 ESIRWAEALQSEHILCQILWIAENTLNLQLLEKSVGLILAILESQQKALDELLPPMLKLG 297

Query: 280 LASILINLLTFEISKLT-SERIPERYSVLDLILRAIEAISIIDDHSQEICSSEELFRLIC 338
           LASILINLLTFEISKL   ERIPERYSVLD ILRAIE +S+ID+HSQEICS++ELF L+C
Sbjct: 298 LASILINLLTFEISKLKRDERIPERYSVLDSILRAIEGLSVIDEHSQEICSNKELFHLVC 357

Query: 339 DLVKFPDKVEVGNCCVTAGVLLANILSDVADHASEVSQDSCLLAGLLDIFPFASDDLEAT 398
           D+VKFPDKVEVGNCCVTA VL+ANILSDVAD ASE+S DSCLL GL+DIFPFASDDLEA 
Sbjct: 358 DMVKFPDKVEVGNCCVTAAVLIANILSDVADRASEISHDSCLLGGLIDIFPFASDDLEAR 417

Query: 399 NAIWNAIARILVRIRETEMSPPSVCNYVSVLVGRIDLIEDELLNQQESLSSPGSTADAIN 458
           NA+WN +ARI VRI ETEM+  S+ + VSVLV RIDLIEDELLNQQ   SSPGSTAD   
Sbjct: 418 NALWNVLARIFVRIHETEMNSSSLFHLVSVLVRRIDLIEDELLNQQCVDSSPGSTADPRK 477

Query: 459 TSLRRIISILNQWTAAKENTESNGNAEVLVSEADINKLLNCCRKF 503
           TSL RI SI+NQW A KE+ E+NGNAE  VSE D+ KLL+CC KF
Sbjct: 478 TSLMRITSIVNQWIAVKEDAENNGNAEGPVSEIDVKKLLDCCHKF 522