Miyakogusa Predicted Gene

Lj3g3v1113580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1113580.1 Non Characterized Hit- tr|K3YI25|K3YI25_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013894,45.16,0.00003,no description,Zinc finger
C2H2-type/integrase DNA-binding domain; C2H2 and C2HC zinc
fingers,NULL; ,CUFF.42233.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |...   104   1e-22
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003...   103   3e-22
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ...   102   5e-22
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1...   100   3e-21
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1...   100   3e-21
Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193...   100   4e-21
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289...    98   2e-20
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1...    97   4e-20
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158...    97   4e-20
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |...    96   8e-20
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289...    92   1e-18
Medtr2g084360.1 | hypothetical protein | HC | chr2:35535966-3553...    91   2e-18
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1...    89   5e-18

>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
           chr8:5790010-5786899 | 20130731
          Length = 517

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 18/159 (11%)

Query: 215 DNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVG 274
           D ++I +    LLAK    C +C KGF+RD NL++H R H   +K     SK I K    
Sbjct: 74  DAEVIAMSPKSLLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRK---- 129

Query: 275 SENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQ 334
                     K Y CP+  C     H   +AL  +   K H+ R H  K + C++C+ K+
Sbjct: 130 ----------KVYVCPEPTCV---HHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCS-KK 175

Query: 335 FSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
           ++V SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 176 YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 214


>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
           chr2:40039886-40042385 | 20130731
          Length = 414

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 26/180 (14%)

Query: 215 DNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVG 274
           D+++I L    L+      C VC KGFKRD NL++H R H              +  K+ 
Sbjct: 44  DSEVIALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGHN-------------LPWKLK 90

Query: 275 SENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQ 334
             N L  ++ K Y CP+  C     H   +AL  +   K H+ R H  K + C +C+ K+
Sbjct: 91  QRNKLEVIRKKVYVCPEKSC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCS-KK 146

Query: 335 FSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM---------FVGHHPAAMNSF 385
           ++V SD + H K CG  +++C CGT FSRKD  + H A           +G  PA +++F
Sbjct: 147 YAVQSDWKAHSKICGTKEYRCDCGTLFSRKDSFLTHRAFCESLVEGSARIGSVPAVISNF 206


>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
           | chr4:22086566-22083892 | 20130731
          Length = 495

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 17/159 (10%)

Query: 215 DNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVG 274
           +++++ +    L+A     C +C KGF+RD NL++H R H   +K     +K  I+ KV 
Sbjct: 50  ESEVVAMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRANKDQIRKKV- 108

Query: 275 SENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQ 334
                       Y CP+  C     H   +AL  +   K HY R H  K + C++C++K 
Sbjct: 109 ------------YVCPEKTCV---HHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKK- 152

Query: 335 FSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
           ++V SD + H K CG  +++C CGT FSRKD  + H A 
Sbjct: 153 YAVQSDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAF 191


>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
           chr1:50790900-50782752 | 20130731
          Length = 571

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 18/159 (11%)

Query: 215 DNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVG 274
           D ++I L    L+A     C VC KGF+R+ NL++H R H   +K         +K K  
Sbjct: 56  DAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK---------LKQKTT 106

Query: 275 SENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQ 334
            E      K K Y CP+  C     H   +AL  +   K HY R H  K + C +C++K 
Sbjct: 107 KE-----PKRKVYLCPEPTCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKK- 157

Query: 335 FSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
           ++V SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 158 YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 196


>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
           chr1:50789869-50782797 | 20130731
          Length = 582

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 18/159 (11%)

Query: 215 DNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVG 274
           D ++I L    L+A     C VC KGF+R+ NL++H R H   +K         +K K  
Sbjct: 67  DAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK---------LKQKTT 117

Query: 275 SENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQ 334
            E      K K Y CP+  C     H   +AL  +   K HY R H  K + C +C++K 
Sbjct: 118 KE-----PKRKVYLCPEPTCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKK- 168

Query: 335 FSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
           ++V SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 169 YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 207


>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
           chr1:41939075-41940250 | 20130731
          Length = 294

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 89/169 (52%), Gaps = 12/169 (7%)

Query: 224 ADLLAKYTHY-CHVCGKGFKRDANLRMHMRAHGDEY-KTSAALSKPIIKHKVGSENSLMS 281
           A +L   T + C VC K F R  N++MHM  HG +Y K   +L  P    K  S +S++ 
Sbjct: 106 AQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGP----KPASSSSMLK 161

Query: 282 VKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQFSVLSDL 341
           +    Y C + GCR N  + + + LK     + HYKR H  K + C++C +K F+V  D 
Sbjct: 162 LP--CYCCAE-GCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKC-RKTFAVRGDW 217

Query: 342 RTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAMFV-GHHPAAMNSFSCSG 389
           RTHEK+CG L W C CG+ F  K  L  HV  F  GH P  + S S  G
Sbjct: 218 RTHEKNCGKL-WFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFDG 265


>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 468

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 18/157 (11%)

Query: 217 DIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVGSE 276
           ++I L    L+A     C +C KGF+RD NL++H R H   +K         +K +  +E
Sbjct: 60  EVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWK---------LKQRTSNE 110

Query: 277 NSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQFS 336
                ++ K Y CP+  C     H   +AL  +   K H+ R H  K + C +C++K ++
Sbjct: 111 -----IRKKVYVCPEPTCV---HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKK-YA 161

Query: 337 VLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
           V SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 162 VQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 198


>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
           chr1:42286106-42289867 | 20130731
          Length = 539

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 18/159 (11%)

Query: 215 DNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVG 274
           D ++I L    L+A     C VC KGF+R+ NL++H R H   +K         +K K  
Sbjct: 59  DAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK---------LKQKSN 109

Query: 275 SENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQ 334
            E      + K Y CP+  C     H   +AL  +   K H+ R H  K + C++C++K 
Sbjct: 110 KE-----PRRKVYLCPEPTCV---HHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKK- 160

Query: 335 FSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
           ++V SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 161 YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 199


>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
           chr1:4158857-4161721 | 20130731
          Length = 452

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 17/156 (10%)

Query: 218 IIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVGSEN 277
           ++ L    LLA     C +C KGF+RD NL++H R H   +K        II+ KV    
Sbjct: 56  VLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKKRNVNEIIRKKV---- 111

Query: 278 SLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQFSV 337
                    Y CP+  C     H   +AL  +   K H+ R H  K + C++C+ K+++V
Sbjct: 112 ---------YVCPEPTC---VHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCS-KRYAV 158

Query: 338 LSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
            SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 159 QSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAF 194


>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
           chr2:38896799-38894235 | 20130731
          Length = 429

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 18/172 (10%)

Query: 202 MSPGDGHEPVDTDDNDIIELDVADLLAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTS 261
           +S G  HE     + ++I L    L+A     C +C K F+RD NL++H R H   +K  
Sbjct: 6   ISNGFLHENTTNPEAEVISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKLK 65

Query: 262 AALSKPIIKHKVGSENSLMSVKPKKYSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHC 321
              SK I K              + Y CP+  C  N      +AL  +   K H+ R H 
Sbjct: 66  QRTSKEIRK--------------RVYVCPEKTCVHNHPS---RALGDLTGIKKHFCRKHG 108

Query: 322 PKMYVCKRCNQKQFSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVAM 373
            K + C++C  K ++V SD + H K CG  +++C CGT FSR+D  + H A 
Sbjct: 109 EKKWKCEKC-SKFYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFVTHRAF 159


>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 399

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 18/147 (12%)

Query: 227 LAKYTHYCHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVGSENSLMSVKPKK 286
           +A     C +C KGF+RD NL++H R H   +K         +K +  +E     ++ K 
Sbjct: 1   MATNRFICEICNKGFQRDQNLQLHKRGHNLPWK---------LKQRTSNE-----IRKKV 46

Query: 287 YSCPQLGCRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQFSVLSDLRTHEK 346
           Y CP+  C     H   +AL  +   K H+ R H  K + C +C++K ++V SD + H K
Sbjct: 47  YVCPEPTCV---HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKK-YAVQSDWKAHSK 102

Query: 347 HCGDLKWQCSCGTTFSRKDKLMGHVAM 373
            CG  +++C CGT FSR+D  + H A 
Sbjct: 103 TCGTREYRCDCGTLFSRRDSFITHRAF 129


>Medtr2g084360.1 | hypothetical protein | HC |
           chr2:35535966-35536556 | 20130731
          Length = 196

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 71/123 (57%), Gaps = 10/123 (8%)

Query: 51  VLKEKLNQVQTLVGIILSPNQTLPESTSLAISSMNTTIQEIIVTATSMMFXXXXXXXXXX 110
            LK+KLNQVQ LVG+ILSPNQ    STS+A+S+ N+TIQEIIVT+TSMMF          
Sbjct: 34  TLKDKLNQVQNLVGVILSPNQQ-DSSTSMALSTTNSTIQEIIVTSTSMMFTCQQIALSFP 92

Query: 111 XXXXXXXXXXXXXXXXXXXKVPPSNFGNYRDVLSNIGTDIRSGQSLFSNTESEALDSWFG 170
                                  SNFGN   ++     D+R GQS+FSN ESE LD WFG
Sbjct: 93  QGTTSIKCTNQEFQKQQSNI--QSNFGNNDTII-----DLR-GQSIFSNNESEPLD-WFG 143

Query: 171 ESY 173
           ESY
Sbjct: 144 ESY 146


>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
           chr1:42286195-42289752 | 20130731
          Length = 522

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 18/140 (12%)

Query: 234 CHVCGKGFKRDANLRMHMRAHGDEYKTSAALSKPIIKHKVGSENSLMSVKPKKYSCPQLG 293
           C VC KGF+R+ NL++H R H   +K         +K K   E      + K Y CP+  
Sbjct: 61  CEVCNKGFQREQNLQLHRRGHNLPWK---------LKQKSNKE-----PRRKVYLCPEPT 106

Query: 294 CRWNQKHAKFQALKSMICAKNHYKRSHCPKMYVCKRCNQKQFSVLSDLRTHEKHCGDLKW 353
           C     H   +AL  +   K H+ R H  K + C++C++K ++V SD + H K CG  ++
Sbjct: 107 CV---HHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKK-YAVQSDWKAHSKTCGTREY 162

Query: 354 QCSCGTTFSRKDKLMGHVAM 373
           +C CGT FSR+D  + H A 
Sbjct: 163 RCDCGTLFSRRDSFITHRAF 182