Miyakogusa Predicted Gene

Lj3g3v1101550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1101550.1 tr|A9RY74|A9RY74_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_206826,32.5,6e-19,seg,NULL; DUF716,Protein of unknown
function DUF716, TMEM45; SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL
ME,NODE_26858_length_1180_cov_47.900002.path1.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g027180.1 | transmembrane 45B-like protein | HC | chr5:112...   264   3e-71
Medtr5g027180.2 | transmembrane 45B-like protein | HC | chr5:112...   264   3e-71
Medtr8g071150.1 | transmembrane 45B-like protein | HC | chr8:301...   248   3e-66
Medtr8g071150.2 | transmembrane 45B-like protein | HC | chr8:301...   248   3e-66
Medtr8g071140.1 | transmembrane 45B-like protein | LC | chr8:301...   220   6e-58
Medtr4g068340.1 | T1.3 protein | HC | chr4:25626826-25625439 | 2...    73   2e-13
Medtr1g112160.1 | T1.3 protein | HC | chr1:50718071-50718826 | 2...    69   4e-12
Medtr2g021690.1 | T1.3 protein | HC | chr2:7380379-7382066 | 201...    51   7e-07

>Medtr5g027180.1 | transmembrane 45B-like protein | HC |
           chr5:11271754-11267763 | 20130731
          Length = 278

 Score =  264 bits (675), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 126/196 (64%), Positives = 143/196 (72%)

Query: 1   MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
           +C+E  YSTHLKIFVGGVLNPSHMNDFEHSGML MFFI GVV +L+EKTRF+PL EG   
Sbjct: 67  LCVEFLYSTHLKIFVGGVLNPSHMNDFEHSGMLLMFFIYGVVALLSEKTRFLPLQEGVLC 126

Query: 61  XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
                           HST+HKGLEG YHTLLV+ IGLCILSS+AGALLP +FP DL  G
Sbjct: 127 FLAAMAFSAEYLLFSFHSTSHKGLEGYYHTLLVFQIGLCILSSIAGALLPNNFPADLSNG 186

Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
           IA+ LQGIWFYQTAFVLYGPMLPDGCKI+DN I C+S DSE+RGE               
Sbjct: 187 IALALQGIWFYQTAFVLYGPMLPDGCKIKDNKIMCNSVDSEIRGELLANFQLFVAILAVL 246

Query: 181 XGTLASYAYAASKYGN 196
            GT+A+Y +AAS+Y N
Sbjct: 247 VGTVAAYVFAASRYAN 262


>Medtr5g027180.2 | transmembrane 45B-like protein | HC |
           chr5:11270980-11267763 | 20130731
          Length = 278

 Score =  264 bits (675), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 126/196 (64%), Positives = 143/196 (72%)

Query: 1   MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
           +C+E  YSTHLKIFVGGVLNPSHMNDFEHSGML MFFI GVV +L+EKTRF+PL EG   
Sbjct: 67  LCVEFLYSTHLKIFVGGVLNPSHMNDFEHSGMLLMFFIYGVVALLSEKTRFLPLQEGVLC 126

Query: 61  XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
                           HST+HKGLEG YHTLLV+ IGLCILSS+AGALLP +FP DL  G
Sbjct: 127 FLAAMAFSAEYLLFSFHSTSHKGLEGYYHTLLVFQIGLCILSSIAGALLPNNFPADLSNG 186

Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
           IA+ LQGIWFYQTAFVLYGPMLPDGCKI+DN I C+S DSE+RGE               
Sbjct: 187 IALALQGIWFYQTAFVLYGPMLPDGCKIKDNKIMCNSVDSEIRGELLANFQLFVAILAVL 246

Query: 181 XGTLASYAYAASKYGN 196
            GT+A+Y +AAS+Y N
Sbjct: 247 VGTVAAYVFAASRYAN 262


>Medtr8g071150.1 | transmembrane 45B-like protein | HC |
           chr8:30189066-30192021 | 20130731
          Length = 269

 Score =  248 bits (632), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 117/196 (59%), Positives = 140/196 (71%)

Query: 1   MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
           +C+EL  +T LK FVGGVLN +++N+FEHSGML MF I GVV +L+EKTR++PLPEG   
Sbjct: 67  LCVELLVATQLKFFVGGVLNSTYLNNFEHSGMLLMFLIFGVVSLLSEKTRYIPLPEGALC 126

Query: 61  XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
                           HS THKGLEG YH LL +LIGLCILSS+AGA+LPT FPVDL KG
Sbjct: 127 LIAATAFTAEYLLFNFHSATHKGLEGYYHVLLAFLIGLCILSSIAGAVLPTCFPVDLSKG 186

Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
           I ITLQGIWFYQTAFVL+GPMLP GC ++DN +TCHS +SEVRGE               
Sbjct: 187 IGITLQGIWFYQTAFVLFGPMLPSGCSMKDNVVTCHSKESEVRGELLANVQLFSAVLAVH 246

Query: 181 XGTLASYAYAASKYGN 196
            GT+AS+ +AAS+YGN
Sbjct: 247 VGTIASFGFAASRYGN 262


>Medtr8g071150.2 | transmembrane 45B-like protein | HC |
           chr8:30189649-30192021 | 20130731
          Length = 269

 Score =  248 bits (632), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 117/196 (59%), Positives = 140/196 (71%)

Query: 1   MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
           +C+EL  +T LK FVGGVLN +++N+FEHSGML MF I GVV +L+EKTR++PLPEG   
Sbjct: 67  LCVELLVATQLKFFVGGVLNSTYLNNFEHSGMLLMFLIFGVVSLLSEKTRYIPLPEGALC 126

Query: 61  XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
                           HS THKGLEG YH LL +LIGLCILSS+AGA+LPT FPVDL KG
Sbjct: 127 LIAATAFTAEYLLFNFHSATHKGLEGYYHVLLAFLIGLCILSSIAGAVLPTCFPVDLSKG 186

Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
           I ITLQGIWFYQTAFVL+GPMLP GC ++DN +TCHS +SEVRGE               
Sbjct: 187 IGITLQGIWFYQTAFVLFGPMLPSGCSMKDNVVTCHSKESEVRGELLANVQLFSAVLAVH 246

Query: 181 XGTLASYAYAASKYGN 196
            GT+AS+ +AAS+YGN
Sbjct: 247 VGTIASFGFAASRYGN 262


>Medtr8g071140.1 | transmembrane 45B-like protein | LC |
           chr8:30184509-30186960 | 20130731
          Length = 366

 Score =  220 bits (561), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 108/196 (55%), Positives = 130/196 (66%)

Query: 1   MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
           +C+EL   T LKIF GG+LN +++N+FEHSG +   FI G V +L+E TR+V +PEG   
Sbjct: 164 LCVELLIGTQLKIFDGGILNATYLNNFEHSGTMLFSFIFGFVTLLSENTRYVTVPEGALC 223

Query: 61  XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
                           HSTTH GLEG YH LL +L+ LCILS++AGALLPTSFPVDLC  
Sbjct: 224 FIFSTAFSTEYILFYYHSTTHIGLEGYYHILLGFLVRLCILSTIAGALLPTSFPVDLCSS 283

Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
           I ITLQGIW YQTAFVLYGPML  GC +RDN ITCHS++SE+ GE               
Sbjct: 284 ITITLQGIWLYQTAFVLYGPMLLAGCTMRDNIITCHSNESEIHGELLANFQLFFAVLVVL 343

Query: 181 XGTLASYAYAASKYGN 196
            GT ASY +AAS+YGN
Sbjct: 344 VGTTASYGFAASRYGN 359


>Medtr4g068340.1 | T1.3 protein | HC | chr4:25626826-25625439 |
           20130731
          Length = 293

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 24  MNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKG 83
           +++FEH+ M     +     +LTE T  + L  G                   HST H G
Sbjct: 84  LDNFEHATMFIHLALFAGFSLLTELTDSLELFSGFVAILVSSVFSQELFLLHFHSTDHVG 143

Query: 84  LEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLYGP-ML 142
            EG YH LL  ++ + +++S+A A+ P SF   +   I++  QG WF    F+LY P  +
Sbjct: 144 PEGHYHWLLQLIVFVSLIASLAAAVFPNSFNAAIVLSISLIFQGCWFINMGFMLYIPTFV 203

Query: 143 PDGCKI---RDN------SITCHSDDSEVRGE 165
           P+GC +   R++      ++TC S +++ R +
Sbjct: 204 PEGCVMNLARESASEIHGAVTCGSKEADFRAK 235


>Medtr1g112160.1 | T1.3 protein | HC | chr1:50718071-50718826 |
           20130731
          Length = 251

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 2/132 (1%)

Query: 17  GVLNPSHMNDFEHSGMLFMFFILGV-VIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXX 75
           G +  +H+++FEHS M   F +     +IL  K+                          
Sbjct: 27  GTIPSNHLHNFEHSSMALSFLVYATFAMILDRKSTSTKSQNEITHLLAAIAFAQQFLLIH 86

Query: 76  XHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAF 135
            HS  H G+EG YH LL  LI +C ++++ G   P SF V   + ++IT QG+W      
Sbjct: 87  LHSRDHMGIEGQYHYLLQVLISICFVTTLMGIGYPMSFLVSFVRSVSITFQGLWLMFMGL 146

Query: 136 VLYGP-MLPDGC 146
           +L+ P   P GC
Sbjct: 147 MLFTPGFEPKGC 158


>Medtr2g021690.1 | T1.3 protein | HC | chr2:7380379-7382066 |
           20130731
          Length = 318

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 8/171 (4%)

Query: 1   MCIELFY--STHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGX 58
           + +ELF   + H      G +   H+++FEH+ +   FF      I+ +K          
Sbjct: 63  ISMELFIGPARHQPFDTDGTIPSYHLHNFEHALISMAFFAYAASSIILDKIE-NQAKLAL 121

Query: 59  XXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLC 118
                             HS  H G EG YH LL  L+ + + +++ G  +  SF V   
Sbjct: 122 TQFLASMAFFQQLLLFHLHSADHMGPEGQYHLLLQVLVFVSLSTTLLGIPMQKSFLVSFV 181

Query: 119 KGIAITLQGIWFYQTAFVLYGP-MLPDGCKIRDNS----ITCHSDDSEVRG 164
           + ++I  QG+W     ++L+ P ++  GC +        + C  ++S  R 
Sbjct: 182 RSLSIFFQGLWLMVMGYMLWTPSLIAKGCFMNSEEGHKVVRCSDEESLHRA 232