Miyakogusa Predicted Gene

Lj3g3v1061480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1061480.1 Non Characterized Hit- tr|I1LV74|I1LV74_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,68.12,4e-18,
,CUFF.42105.1
         (69 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g076020.2 | transmembrane protein, putative | HC | chr2:31...    74   3e-14
Medtr2g076020.1 | transmembrane protein, putative | HC | chr2:31...    74   3e-14

>Medtr2g076020.2 | transmembrane protein, putative | HC |
          chr2:31820399-31822037 | 20130731
          Length = 72

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 3/72 (4%)

Query: 1  MTGEEVSGPAGPKLVRLIWFVGAAVICTMGTNKWLEYEKKTII---QQQQGAKAVAETPI 57
          MTGEE SGP GPKL+RL++FVGAAV  T+  NKW E+E K+II   QQQ+G K VAE P 
Sbjct: 1  MTGEEYSGPPGPKLMRLVYFVGAAVAVTVAINKWREFESKSIIQQQQQQKGVKVVAEIPN 60

Query: 58 SSESVDMHKALK 69
          SS+SV +HKALK
Sbjct: 61 SSDSVAVHKALK 72


>Medtr2g076020.1 | transmembrane protein, putative | HC |
          chr2:31820384-31825526 | 20130731
          Length = 72

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 3/72 (4%)

Query: 1  MTGEEVSGPAGPKLVRLIWFVGAAVICTMGTNKWLEYEKKTII---QQQQGAKAVAETPI 57
          MTGEE SGP GPKL+RL++FVGAAV  T+  NKW E+E K+II   QQQ+G K VAE P 
Sbjct: 1  MTGEEYSGPPGPKLMRLVYFVGAAVAVTVAINKWREFESKSIIQQQQQQKGVKVVAEIPN 60

Query: 58 SSESVDMHKALK 69
          SS+SV +HKALK
Sbjct: 61 SSDSVAVHKALK 72