Miyakogusa Predicted Gene

Lj3g3v1059130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1059130.1 CUFF.42088.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R...   127   4e-30
Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...   117   3e-27

>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:6917300-6911610 | 20130731
          Length = 634

 Score =  127 bits (320), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 3/160 (1%)

Query: 2   LNEGLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKIXXXXXXXXXXXXXXXX 61
           LN+G+SGY +L L  KL LL FICDE L + K+RSYI+ +N+ +                
Sbjct: 438 LNKGISGYNDLDLPKKLILLNFICDEALGTMKLRSYIDDQNAILAEEMKAAKSKVAEAKE 497

Query: 62  XVNSLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQAHSEMLEAKEKIPKR-K 120
              SLKQKLQ+E AK   S+G   S +E DA V K +  E A+AHSE+LEAK  IPKR +
Sbjct: 498 KEKSLKQKLQDEMAKAAISNGTNLSISEYDALVSK-IKIEAAKAHSELLEAKGTIPKRNQ 556

Query: 121 ISDATRIEPHFVDGR-KVFWKFKCFEGEDTLLLQDIKVQE 159
             DA RIEP ++D     FWK K + GE   LLQD+K+ +
Sbjct: 557 CCDAVRIEPEYLDNSGNAFWKLKSYNGEYAFLLQDVKIHD 596


>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score =  117 bits (294), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 3/160 (1%)

Query: 2   LNEGLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKIXXXXXXXXXXXXXXXX 61
           LN+G+SGY +L LS KL LL FICDE L++ K+R++I+ +N++                 
Sbjct: 538 LNKGISGYYDLDLSKKLILLNFICDEALSTMKLRNFIDDQNARFAEEKKAAKSKVSDAKE 597

Query: 62  XVNSLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQAHSEMLEAKEKIPKR-K 120
              SLKQKLQ+E A  + SSG   S +E DA + K + +E  +AH+E++EAK  IPKR +
Sbjct: 598 KERSLKQKLQDEIANAVVSSGASLSISEHDALLAK-IKSEATKAHTELIEAKGTIPKRNR 656

Query: 121 ISDATRIEPHFVDGR-KVFWKFKCFEGEDTLLLQDIKVQE 159
             D  RIEP ++D   K FWK +    E   +LQD+K+ +
Sbjct: 657 HCDTVRIEPEYLDSNGKTFWKLRSCNDEYAFMLQDLKIHD 696