Miyakogusa Predicted Gene

Lj3g3v1059100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1059100.1 tr|G7IKS1|G7IKS1_MEDTR Syntaxin-71 OS=Medicago
truncatula GN=MTR_2g093800 PE=4 SV=1,66.67,0.000000000000002,seg,NULL;
SUBFAMILY NOT NAMED,NULL; SYNTAXIN,NULL,gene.g46750.t1.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g093800.1 | syntaxin of plants protein | HC | chr2:4000871...   206   6e-54
Medtr1g066460.1 | syntaxin of plants protein | HC | chr1:2851277...   168   2e-42
Medtr1g066460.2 | syntaxin of plants protein | HC | chr1:2851277...   168   2e-42
Medtr7g100980.1 | syntaxin of plants protein | HC | chr7:4072795...   163   6e-41

>Medtr2g093800.1 | syntaxin of plants protein | HC |
           chr2:40008710-40011407 | 20130731
          Length = 262

 Score =  206 bits (524), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 101/147 (68%), Positives = 116/147 (78%), Gaps = 3/147 (2%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           MSV+++ FRVD IC+KYDKYDIDKQR+LNAYGD  FARLY  V+S IQ ALNKSEAAS E
Sbjct: 1   MSVIDILFRVDDICKKYDKYDIDKQRELNAYGDDGFARLYAAVDSTIQQALNKSEAASKE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
            N              KGRLMDE+PKL KLVNKKVKGL++E++ IR DLV+ALPERI +I
Sbjct: 61  TNRAVAAAWNAEVRRAKGRLMDEVPKLTKLVNKKVKGLSSEDIAIRNDLVLALPERILSI 120

Query: 121 PDGITAAANHTGGWDATSSHPHIKFDS 147
           PDGIT+AA+HTGG   TSSHPHIKFDS
Sbjct: 121 PDGITSAASHTGG---TSSHPHIKFDS 144


>Medtr1g066460.1 | syntaxin of plants protein | HC |
           chr1:28512776-28508155 | 20130731
          Length = 265

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/149 (53%), Positives = 100/149 (67%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           MSV++L  RVD IC+KYDKYD+DKQ   N  GD +F RLY +V+S I+A L K+E AS E
Sbjct: 1   MSVIDLLTRVDSICKKYDKYDLDKQNNANVSGDDAFVRLYASVDSDIEALLQKAEKASNE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
           +               K RL++E+PKL++L  KKVKGL ++E   R DLV+ALPERIQAI
Sbjct: 61  RGKASAVAINAEIRRTKARLLEEVPKLQRLALKKVKGLESQEFAARNDLVLALPERIQAI 120

Query: 121 PDGITAAANHTGGWDATSSHPHIKFDSSG 149
           PDG   A   TGGW +++S P IKFDS G
Sbjct: 121 PDGTPVAPKQTGGWASSASRPEIKFDSDG 149


>Medtr1g066460.2 | syntaxin of plants protein | HC |
           chr1:28512776-28509818 | 20130731
          Length = 261

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/149 (53%), Positives = 100/149 (67%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           MSV++L  RVD IC+KYDKYD+DKQ   N  GD +F RLY +V+S I+A L K+E AS E
Sbjct: 1   MSVIDLLTRVDSICKKYDKYDLDKQNNANVSGDDAFVRLYASVDSDIEALLQKAEKASNE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
           +               K RL++E+PKL++L  KKVKGL ++E   R DLV+ALPERIQAI
Sbjct: 61  RGKASAVAINAEIRRTKARLLEEVPKLQRLALKKVKGLESQEFAARNDLVLALPERIQAI 120

Query: 121 PDGITAAANHTGGWDATSSHPHIKFDSSG 149
           PDG   A   TGGW +++S P IKFDS G
Sbjct: 121 PDGTPVAPKQTGGWASSASRPEIKFDSDG 149


>Medtr7g100980.1 | syntaxin of plants protein | HC |
           chr7:40727955-40730728 | 20130731
          Length = 261

 Score =  163 bits (412), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 77/149 (51%), Positives = 100/149 (67%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           MSV+E+  RVD IC+KYD+YD+ K    N   D +FA+LY   ++ I+AAL K+E AS E
Sbjct: 1   MSVIEILTRVDTICKKYDRYDVVKHNDANVSADDAFAKLYAIFDANIEAALQKAETASKE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
           KN              K RL++EIPKL++L  KKVKGL+ +E + R DLV++LPERIQAI
Sbjct: 61  KNRASTVAINAEIRRTKARLLEEIPKLQRLAVKKVKGLSLQEFSTRNDLVLSLPERIQAI 120

Query: 121 PDGITAAANHTGGWDATSSHPHIKFDSSG 149
           PDG  AA   TGGW A+++ P IKFDS G
Sbjct: 121 PDGTPAAPKQTGGWGASATRPEIKFDSDG 149