Miyakogusa Predicted Gene

Lj3g3v1011010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1011010.1 tr|G7JFG9|G7JFG9_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_4g130200 PE=4
SV=1,61.96,3e-19,FBD,FBD,CUFF.41991.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130200.1 | F-box/RNI/FBD-like domain protein | LC | chr4:...   101   1e-22
Medtr4g080590.1 | F-box/RNI/FBD-like domain protein | HC | chr4:...    97   3e-21
Medtr4g080787.2 | F-box/RNI/FBD-like domain protein | LC | chr4:...    91   3e-19
Medtr4g080787.1 | F-box/RNI/FBD-like domain protein | LC | chr4:...    91   3e-19
Medtr4g080773.4 | F-box/RNI/FBD-like domain protein | LC | chr4:...    90   5e-19
Medtr4g080773.2 | F-box/RNI/FBD-like domain protein | LC | chr4:...    90   5e-19
Medtr4g080773.3 | F-box/RNI/FBD-like domain protein | LC | chr4:...    90   5e-19
Medtr4g080773.1 | F-box/RNI/FBD-like domain protein | LC | chr4:...    90   5e-19
Medtr3g048290.1 | F-box/RNI/FBD-like domain protein | LC | chr3:...    87   3e-18
Medtr7g023330.1 | F-box/RNI/FBD-like domain protein | LC | chr7:...    87   4e-18
Medtr4g080807.1 | F-box/RNI/FBD-like domain protein | LC | chr4:...    81   3e-16
Medtr7g023310.1 | F-box/RNI/FBD-like domain protein | LC | chr7:...    80   3e-16
Medtr5g039950.1 | F-box/RNI/FBD-like domain protein | LC | chr5:...    79   8e-16
Medtr4g081030.1 | F-box/RNI/FBD-like domain protein | LC | chr4:...    51   3e-07
Medtr3g094980.1 | FBD protein | LC | chr3:43358937-43360241 | 20...    48   2e-06

>Medtr4g130200.1 | F-box/RNI/FBD-like domain protein | LC |
           chr4:54221385-54218954 | 20130731
          Length = 392

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           +DIL+KTPKLEVLHI  G      +D ED   +S+PCC K SLK  S S FDG E EIQL
Sbjct: 286 VDILRKTPKLEVLHISKG--DCTALDNEDLTSDSLPCCIKSSLKLCSFSDFDGDEIEIQL 343

Query: 61  LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           LK L ENATVLE I IFCS  LSSNLKK  ++ N
Sbjct: 344 LKCLTENATVLEAINIFCSGGLSSNLKKLTDVRN 377


>Medtr4g080590.1 | F-box/RNI/FBD-like domain protein | HC |
           chr4:31220054-31216957 | 20130731
          Length = 456

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 2/93 (2%)

Query: 2   DILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQLL 61
           DIL+K+PKLE LHI  G    + +D ED   +S+PCCFK SLKS  IS F G EAEI+L+
Sbjct: 347 DILRKSPKLEFLHIYGG--SYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLV 404

Query: 62  KFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           KFLLEN T+L E+ I+C+  LS   KK A++ N
Sbjct: 405 KFLLENVTLLREMNIYCTGYLSKKSKKLADVRN 437


>Medtr4g080787.2 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31257182-31252958 | 20130731
          Length = 494

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 8/97 (8%)

Query: 1   MDILQKTPKLEVLHIP---MGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAE 57
           M IL+KTPKLEVL IP   + +     +D ED ILNSVPCCFK SL   S   F G E E
Sbjct: 358 MHILRKTPKLEVLEIPRVVLNY-----LDSEDLILNSVPCCFKSSLSRLSFLNFYGNEYE 412

Query: 58  IQLLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           IQ + F+L+NA  LEEI I CS+ LS++++K  +  N
Sbjct: 413 IQFVTFILKNAPYLEEINIHCSRRLSADMEKLDDARN 449


>Medtr4g080787.1 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31257182-31252958 | 20130731
          Length = 494

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 8/97 (8%)

Query: 1   MDILQKTPKLEVLHIP---MGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAE 57
           M IL+KTPKLEVL IP   + +     +D ED ILNSVPCCFK SL   S   F G E E
Sbjct: 358 MHILRKTPKLEVLEIPRVVLNY-----LDSEDLILNSVPCCFKSSLSRLSFLNFYGNEYE 412

Query: 58  IQLLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           IQ + F+L+NA  LEEI I CS+ LS++++K  +  N
Sbjct: 413 IQFVTFILKNAPYLEEINIHCSRRLSADMEKLDDARN 449


>Medtr4g080773.4 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31240480-31235653 | 20130731
          Length = 497

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           M+ILQKTPKLEVL IP        +DGED ILNSVPCCF  SL     S F G E EIQ 
Sbjct: 361 MNILQKTPKLEVLEIPAAVLNY--LDGEDLILNSVPCCFNSSLNRLCFSNFYGNEYEIQF 418

Query: 61  LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           + F+L+NA  L +I I CS+ L ++++K  ++ N
Sbjct: 419 VTFILKNAPYLRKIDIHCSRRLIADIEKLDDVCN 452


>Medtr4g080773.2 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31240480-31235653 | 20130731
          Length = 497

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           M+ILQKTPKLEVL IP        +DGED ILNSVPCCF  SL     S F G E EIQ 
Sbjct: 361 MNILQKTPKLEVLEIPAAVLNY--LDGEDLILNSVPCCFNSSLNRLCFSNFYGNEYEIQF 418

Query: 61  LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           + F+L+NA  L +I I CS+ L ++++K  ++ N
Sbjct: 419 VTFILKNAPYLRKIDIHCSRRLIADIEKLDDVCN 452


>Medtr4g080773.3 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31240480-31235653 | 20130731
          Length = 497

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           M+ILQKTPKLEVL IP        +DGED ILNSVPCCF  SL     S F G E EIQ 
Sbjct: 361 MNILQKTPKLEVLEIPAAVLNY--LDGEDLILNSVPCCFNSSLNRLCFSNFYGNEYEIQF 418

Query: 61  LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           + F+L+NA  L +I I CS+ L ++++K  ++ N
Sbjct: 419 VTFILKNAPYLRKIDIHCSRRLIADIEKLDDVCN 452


>Medtr4g080773.1 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31240025-31236290 | 20130731
          Length = 503

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           M+ILQKTPKLEVL IP        +DGED ILNSVPCCF  SL     S F G E EIQ 
Sbjct: 361 MNILQKTPKLEVLEIPAAVLNY--LDGEDLILNSVPCCFNSSLNRLCFSNFYGNEYEIQF 418

Query: 61  LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           + F+L+NA  L +I I CS+ L ++++K  ++ N
Sbjct: 419 VTFILKNAPYLRKIDIHCSRRLIADIEKLDDVCN 452


>Medtr3g048290.1 | F-box/RNI/FBD-like domain protein | LC |
           chr3:16129714-16134119 | 20130731
          Length = 482

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 8/97 (8%)

Query: 1   MDILQKTPKLEVLHIP---MGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAE 57
           MDIL+KTPKLE L IP   + +     +D +D ILNS+PCCFK SLK      F G   E
Sbjct: 359 MDILRKTPKLEDLTIPGVVLNY-----LDSDDLILNSLPCCFKSSLKRLCFLNFHGNVHE 413

Query: 58  IQLLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           I+ + F+LENA  LEEI+I CS+ LS++++K  ++ N
Sbjct: 414 IKFVTFILENAPYLEEIKIHCSRHLSADMEKLDDVRN 450


>Medtr7g023330.1 | F-box/RNI/FBD-like domain protein | LC |
           chr7:7638315-7639977 | 20130731
          Length = 396

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           MDIL KTP L+ LH  +G    I ++ +D  L SVPCCFKYSLKSF +S F G E  IQ 
Sbjct: 292 MDILLKTPNLKALHFHVGSVSFIHLE-DDWPLLSVPCCFKYSLKSFCVSDFRGLEQHIQF 350

Query: 61  LKFLLENATVLEEIRIFCSKTLSS---NLKKQAE 91
           + F+L+NA VLEEIRI CS  +++   N++ Q +
Sbjct: 351 INFVLKNAKVLEEIRIVCSSDITTYLDNIRSQLQ 384


>Medtr4g080807.1 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31268960-31267199 | 20130731
          Length = 418

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 1   MDILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQL 60
           MDIL+KTPKLEVL IP        + GED +LNSVPCCFK SL    I  F G E EI+ 
Sbjct: 226 MDILRKTPKLEVLEIPGVVHNY--LGGEDLMLNSVPCCFKSSLNRLCIFNFYGDEYEIKF 283

Query: 61  LKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           L F+L+N   L +I+I  S+ L+++ +K  ++ N
Sbjct: 284 LTFMLKNCQYLGDIKIHSSRHLTADAEKLDDVRN 317


>Medtr7g023310.1 | F-box/RNI/FBD-like domain protein | LC |
           chr7:7631602-7633260 | 20130731
          Length = 457

 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 4/92 (4%)

Query: 3   ILQKTPKLEVLHIPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQLLK 62
           IL KTP L+ LHI   F+  + ++ +D  L SVP CF+YSLKSF +S F G E  IQ +K
Sbjct: 355 ILLKTPNLKALHIHTRFESFMDLE-DDWTLLSVPYCFEYSLKSFCVSDFLGLEQHIQFIK 413

Query: 63  FLLENATVLEEIRIFCSK---TLSSNLKKQAE 91
           F+L+NA VLEEIRI CS    T   N+K Q E
Sbjct: 414 FVLKNARVLEEIRIVCSSDILTDRDNIKSQLE 445


>Medtr5g039950.1 | F-box/RNI/FBD-like domain protein | LC |
           chr5:17585103-17586764 | 20130731
          Length = 420

 Score = 79.0 bits (193), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 6/95 (6%)

Query: 2   DILQKTPKLEVLHIPMGFDPQICMD--GEDGILNSVPCCFKYSLKSFSISYFDGGEAEIQ 59
           DIL KTPKLEVL IPM +    C+    E+  +NSVPCCFK SLK   IS F+G + E+Q
Sbjct: 315 DILHKTPKLEVLGIPMVY----CLHLVDEEVTINSVPCCFKSSLKFLWISDFNGYKYEVQ 370

Query: 60  LLKFLLENATVLEEIRIFCSKTLSSNLKKQAEISN 94
           ++  L+E  T+LEE++I  S  LS  L+++  + N
Sbjct: 371 MISLLVEKFTILEEMKISFSGFLSDCLEEETAVKN 405


>Medtr4g081030.1 | F-box/RNI/FBD-like domain protein | LC |
           chr4:31278741-31277464 | 20130731
          Length = 388

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 15  IPMGFDPQICMDGEDGILNSVPCCFKYSLKSFSIS--YFDGGEAEIQLLKFLLENATVLE 72
           + +  D   C+      L+ +PC    +L + ++S  YF    A+I+LLK LLE A+VLE
Sbjct: 292 LSLTIDTLECLSYTKDTLHLLPCFCNLTLLNVNLSTPYFGEEIAKIELLKILLEKASVLE 351

Query: 73  EIRIFCSKTLSSNLKKQAEISN 94
           +I IFCS++L ++L+ Q  I N
Sbjct: 352 KIEIFCSESLLADLEMQKYIRN 373


>Medtr3g094980.1 | FBD protein | LC | chr3:43358937-43360241 |
           20130731
          Length = 173

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)

Query: 34  SVPCCFKYSLKSFSISYFDGGEAEIQLLKFLLENATVLEEIRIFCSKTLSSNLKKQAEIS 93
           SVP C    LK+ ++ YF G   E+QL  ++L NA VL+ ++I C  +    LKK+ E+S
Sbjct: 75  SVPRCISLHLKTCTLWYFRGQHGEVQLATYILNNARVLQTMKICCCDS----LKKEREVS 130