Miyakogusa Predicted Gene

Lj3g3v1010920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1010920.1 Non Characterized Hit- tr|I3SMY8|I3SMY8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.46,0,coiled-coil,NULL; Ligand-binding domain in the NO
signalling and Golgi transport,NO signalling/Golgi,CUFF.42177.1
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g081170.1 | trafficking protein particle complex subunit-l...   363   e-101
Medtr8g027700.1 | trafficking protein particle complex subunit-l...   359   1e-99
Medtr8g027700.2 | trafficking protein particle complex subunit-l...   261   3e-70
Medtr4g027400.1 | trafficking protein particle complex subunit, ...    87   6e-18

>Medtr4g081170.1 | trafficking protein particle complex subunit-like
           protein | HC | chr4:31425435-31428399 | 20130731
          Length = 186

 Score =  363 bits (932), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/186 (94%), Positives = 180/186 (96%)

Query: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MAPVAPR+GDAIFANIERVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRTGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 60

Query: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDF 120
           +DEFLAKSNVSRCVDFRET DVIAKVGFKMFLGVTASVTNWDAEGT CSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCVDFRETADVIAKVGFKMFLGVTASVTNWDAEGTTCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKQVPEEY 180
           VELPD  QGLYYCNILSGVIRGALDMVSMK EVTWLRD LRGDDVFELQVKLLKQVPEEY
Sbjct: 121 VELPDNYQGLYYCNILSGVIRGALDMVSMKAEVTWLRDALRGDDVFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 186
           PYKDDE
Sbjct: 181 PYKDDE 186


>Medtr8g027700.1 | trafficking protein particle complex subunit-like
           protein | HC | chr8:9998867-10005069 | 20130731
          Length = 186

 Score =  359 bits (921), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 173/186 (93%), Positives = 179/186 (96%)

Query: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MAPVAPRSGDAIFANIE VNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRSGDAIFANIEHVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 60

Query: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDF 120
           +DEFLAKSNVS CVDFRET +VIAKVG KMF+GVTASVTNW+AEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNVSSCVDFRETAEVIAKVGLKMFIGVTASVTNWNAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKQVPEEY 180
           VELPDT QGL+YCNILSGVIRGALDMVSMK EVTWLRD LRGDDVFELQVKLLKQVPEEY
Sbjct: 121 VELPDTYQGLHYCNILSGVIRGALDMVSMKAEVTWLRDALRGDDVFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 186
           PYKDDE
Sbjct: 181 PYKDDE 186


>Medtr8g027700.2 | trafficking protein particle complex subunit-like
           protein | HC | chr8:9998876-10005069 | 20130731
          Length = 135

 Score =  261 bits (666), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 124/135 (91%), Positives = 129/135 (95%)

Query: 52  MGYNIGIRLVDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIV 111
           MGYNIGIRL+DEFLAKSNVS CVDFRET +VIAKVG KMF+GVTASVTNW+AEGTCCSIV
Sbjct: 1   MGYNIGIRLIDEFLAKSNVSSCVDFRETAEVIAKVGLKMFIGVTASVTNWNAEGTCCSIV 60

Query: 112 LEDNPLVDFVELPDTCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVK 171
           LEDNPLVDFVELPDT QGL+YCNILSGVIRGALDMVSMK EVTWLRD LRGDDVFELQVK
Sbjct: 61  LEDNPLVDFVELPDTYQGLHYCNILSGVIRGALDMVSMKAEVTWLRDALRGDDVFELQVK 120

Query: 172 LLKQVPEEYPYKDDE 186
           LLKQVPEEYPYKDDE
Sbjct: 121 LLKQVPEEYPYKDDE 135


>Medtr4g027400.1 | trafficking protein particle complex subunit,
          putative | LC | chr4:9470750-9472320 | 20130731
          Length = 93

 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 43/47 (91%)

Query: 1  MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNK 47
          MAPVAPRSGDAIFANIE VNAELFTLTYG IV QLLTDL+EVEE +K
Sbjct: 1  MAPVAPRSGDAIFANIEHVNAELFTLTYGTIVHQLLTDLKEVEESSK 47