Miyakogusa Predicted Gene

Lj3g3v1010900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1010900.1 Non Characterized Hit- tr|I3T7E0|I3T7E0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.9,0,FAD/NAD(P)-binding domain,NULL; no description,NULL;
Thi4,NULL; TIGR00292: thiazole biosynthesis enz,CUFF.42169.1
         (364 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g081130.1 | thiazole biosynthetic enzyme | HC | chr4:31409...   558   e-159
Medtr1g105480.1 | thiazole biosynthetic enzyme | HC | chr1:47482...   537   e-153

>Medtr4g081130.1 | thiazole biosynthetic enzyme | HC |
           chr4:31409158-31406252 | 20130731
          Length = 350

 Score =  558 bits (1438), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/334 (83%), Positives = 297/334 (88%), Gaps = 11/334 (3%)

Query: 23  IPTPSSL----SSFNKPLTFQSMKPSLRKLCMSMXXXXXXXXXXXYDLGSFKFAPIKESI 78
           + TPSSL    SSFN+ L+    KP   +  +S+           YDL +FKFAPIKESI
Sbjct: 13  LSTPSSLTEKPSSFNQTLSL-GFKP---RHSISVSASAAPSPPPSYDLNAFKFAPIKESI 68

Query: 79  VSREMTRRYMTDMVTFADTDVVIVGAGSAGLTCAYELSKNPNVQVAIIEQSVSPGGGAWL 138
           V+REMTRRYMTDMVT ADTDVVIVGAGSAGL+CAYELSKNPNV++AIIEQSVSPGGGAWL
Sbjct: 69  VAREMTRRYMTDMVTHADTDVVIVGAGSAGLSCAYELSKNPNVKIAIIEQSVSPGGGAWL 128

Query: 139 GGQLFSAMVVRKPAHLFLNELGVDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAV 198
           GGQLFSAMVVRKPAH FL+EL ++YDEQD+YVVIKHAALFTSTIMSKLLARPNVKLFNAV
Sbjct: 129 GGQLFSAMVVRKPAHHFLDELEIEYDEQDDYVVIKHAALFTSTIMSKLLARPNVKLFNAV 188

Query: 199 AAEDLIVKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL 258
           AAEDLIVKN RVGGVVTNWALVSMNHDTQSCMDPNVME+KVVVSSCGHDGPFGATGVKRL
Sbjct: 189 AAEDLIVKNERVGGVVTNWALVSMNHDTQSCMDPNVMESKVVVSSCGHDGPFGATGVKRL 248

Query: 259 KSIGLIDRVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMI 318
           KSIGLID VPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMI
Sbjct: 249 KSIGLIDTVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMI 308

Query: 319 SGQKAAHLALRSLGLPNAVDKNNAAGKIHPELVL 352
           SGQKAAHLALR+LGLPNAVD    AG IHPELVL
Sbjct: 309 SGQKAAHLALRALGLPNAVDH---AGNIHPELVL 339


>Medtr1g105480.1 | thiazole biosynthetic enzyme | HC |
           chr1:47482381-47480089 | 20130731
          Length = 349

 Score =  537 bits (1384), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/332 (79%), Positives = 293/332 (88%), Gaps = 13/332 (3%)

Query: 25  TPSSLSSFN-KPLTFQS---MKPSLRKLCMSMXXXXXXXXXXXYDLGSFKFAPIKESIVS 80
           TP S S FN +P+  ++   +K + +K+ MS+           YD+ +FKFAPIKESIVS
Sbjct: 16  TPKS-SFFNGRPIATRTSTIIKSTPQKITMSLTTPP-------YDINTFKFAPIKESIVS 67

Query: 81  REMTRRYMTDMVTFADTDVVIVGAGSAGLTCAYELSKNPNVQVAIIEQSVSPGGGAWLGG 140
           REMTRRYMTDM+T+ADTDVVIVGAGSAGL+CAYELSKNPN+ +AIIEQSVSPGGGAWLGG
Sbjct: 68  REMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKNPNISIAIIEQSVSPGGGAWLGG 127

Query: 141 QLFSAMVVRKPAHLFLNELGVDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAA 200
           QLFSAMVVRKPAHLFL+E+GV+YDEQ++YVVIKHAALFTSTIMSKLLA+PNVKLFNAVAA
Sbjct: 128 QLFSAMVVRKPAHLFLDEIGVEYDEQEDYVVIKHAALFTSTIMSKLLAKPNVKLFNAVAA 187

Query: 201 EDLIVKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKS 260
           EDLIVK  RV GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKS
Sbjct: 188 EDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKS 247

Query: 261 IGLIDRVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISG 320
           IG+ID VPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISG
Sbjct: 248 IGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISG 307

Query: 321 QKAAHLALRSLGLPNAVDKNNAAGKIHPELVL 352
           QKAAHLAL++LG  NA+D    +    PEL+L
Sbjct: 308 QKAAHLALKALGRNNAIDGTCESAS-EPELIL 338