Miyakogusa Predicted Gene

Lj3g3v0965840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0965840.2 Non Characterized Hit- tr|I1KU39|I1KU39_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,94.19,0,GTP_EFTU,Elongation factor, GTP-binding domain;
eIF2_C,Translation initiation factor 2, gamma subuni,CUFF.41904.2
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g069440.2 | eukaryotic translation initiation factor 2 EIF...   904   0.0  
Medtr2g069440.1 | eukaryotic translation initiation factor 2 EIF...   903   0.0  
Medtr2g075870.1 | eukaryotic translation initiation factor 2 EIF...   895   0.0  
Medtr2g021300.1 | GTP-binding elongation factor Tu family protei...    78   2e-14
Medtr7g094460.1 | GTP-binding elongation factor Tu family protei...    75   2e-13
Medtr3g076660.1 | elongation factor Tu protein | HC | chr3:34457...    71   2e-12

>Medtr2g069440.2 | eukaryotic translation initiation factor 2
           EIF2-gamma-II | HC | chr2:28871269-28865988 | 20130731
          Length = 466

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/465 (94%), Positives = 451/465 (96%)

Query: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+R+GLMEQDLS LDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARRGLMEQDLSTLDVNKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLLR 120
           KNELERNITIKLGYANAKIYKCEDERC RPMSY+AYGSGKED+PMC+VPGFEN KMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNKVDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240
           QNKVDLIQENVAINQHE IQKFI+GTVAD APVVPISAQLKYNIDVVCEYIVKKIPIPER
Sbjct: 181 QNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240

Query: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGN 300
           NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPG++ KDESGN
Sbjct: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGN 300

Query: 301 IRCTPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF 360
           IRCTPIYSRIVSL AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLP+VF
Sbjct: 301 IRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVF 360

Query: 361 VELEVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKLQ 420
           VELEVNFFLLRRLLGVRTKG+ERQGKV+KLTK E LMLNIGSMSTG KV AVKNDLAKLQ
Sbjct: 361 VELEVNFFLLRRLLGVRTKGSERQGKVSKLTKSEILMLNIGSMSTGAKVTAVKNDLAKLQ 420

Query: 421 LTGPVCTSQGEKIALSRRVEKHWRLIGWGQIQAGITLAVPPAPVL 465
           LT PVCTS+GEKIALSRRVEKHWRLIGWGQIQAGITL VPPAP+L
Sbjct: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPLL 465


>Medtr2g069440.1 | eukaryotic translation initiation factor 2
           EIF2-gamma-II | HC | chr2:28873685-28866179 | 20130731
          Length = 643

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/465 (94%), Positives = 451/465 (96%)

Query: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+R+GLMEQDLS LDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 178 MARRGLMEQDLSTLDVNKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 237

Query: 61  KNELERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLLR 120
           KNELERNITIKLGYANAKIYKCEDERC RPMSY+AYGSGKED+PMC+VPGFEN KMKLLR
Sbjct: 238 KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 297

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
Sbjct: 298 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 357

Query: 181 QNKVDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240
           QNKVDLIQENVAINQHE IQKFI+GTVAD APVVPISAQLKYNIDVVCEYIVKKIPIPER
Sbjct: 358 QNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPER 417

Query: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGN 300
           NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPG++ KDESGN
Sbjct: 418 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGN 477

Query: 301 IRCTPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF 360
           IRCTPIYSRIVSL AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLP+VF
Sbjct: 478 IRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVF 537

Query: 361 VELEVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKLQ 420
           VELEVNFFLLRRLLGVRTKG+ERQGKV+KLTK E LMLNIGSMSTG KV AVKNDLAKLQ
Sbjct: 538 VELEVNFFLLRRLLGVRTKGSERQGKVSKLTKSEILMLNIGSMSTGAKVTAVKNDLAKLQ 597

Query: 421 LTGPVCTSQGEKIALSRRVEKHWRLIGWGQIQAGITLAVPPAPVL 465
           LT PVCTS+GEKIALSRRVEKHWRLIGWGQIQAGITL VPPAP+L
Sbjct: 598 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPLL 642


>Medtr2g075870.1 | eukaryotic translation initiation factor 2
           EIF2-gamma-II | HC | chr2:31743648-31750055 | 20130731
          Length = 466

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/465 (93%), Positives = 448/465 (96%)

Query: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MSRKGLMEQDLSKLDVTKL+PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MSRKGLMEQDLSKLDVTKLNPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLLR 120
           KNELERNITIKLGYANAK+YKCEDERC RPMSY+AYGSGKED PMC+V GFENCKMKLLR
Sbjct: 61  KNELERNITIKLGYANAKLYKCEDERCPRPMSYKAYGSGKEDNPMCDVAGFENCKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNKVDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240
           QNKVDLIQENVAINQHE IQ+FIEGTVAD APVVPISAQLKYNID VCEYIVKKIPIPER
Sbjct: 181 QNKVDLIQENVAINQHEAIQRFIEGTVADGAPVVPISAQLKYNIDAVCEYIVKKIPIPER 240

Query: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGN 300
           NF+SPPNMIVIRSFDVNKPG+EVDEIKGGVAGGSILRGVLKVNQFIEVRPG++ KDE GN
Sbjct: 241 NFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDEDGN 300

Query: 301 IRCTPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF 360
           +RCTPIYSRIVSL AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVG VLGEVGSLPEVF
Sbjct: 301 MRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGHVLGEVGSLPEVF 360

Query: 361 VELEVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKLQ 420
           VELEVNFFLLRRLLGVRTKG+E+QGKVAKLTK E LMLNIGSMSTG KV AVKNDLAKLQ
Sbjct: 361 VELEVNFFLLRRLLGVRTKGSEKQGKVAKLTKSEILMLNIGSMSTGAKVTAVKNDLAKLQ 420

Query: 421 LTGPVCTSQGEKIALSRRVEKHWRLIGWGQIQAGITLAVPPAPVL 465
           LT PVCTS+GEKIALSRRVEKHWRLIGWGQIQAGITL VPP P+L
Sbjct: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLEVPPTPIL 465


>Medtr2g021300.1 | GTP-binding elongation factor Tu family protein |
           HC | chr2:7236483-7239439 | 20130731
          Length = 436

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 156/364 (42%), Gaps = 72/364 (19%)

Query: 33  INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCSRPMS 92
           +N+GTIGHV HGK+T+  AI+ V                 G   AK    +D    +   
Sbjct: 51  VNVGTIGHVDHGKTTLTAAITKVLA---------------GEGKAKAIAFDD--IDKAPE 93

Query: 93  YRAYGSGKEDAPMCEVPGFENCKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIA 152
            +A G     A +     +E  K    RH + VDCPGH   +  M+ GAA MDG +L+++
Sbjct: 94  EKARGITIATAHVE----YETEK----RHYAHVDCPGHADYVKNMITGAAQMDGGILVVS 145

Query: 153 ANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQ-----ENVAINQHEVIQKFIEGTV 207
           A +  P PQT EH+     + +  ++   NKVD++      E V +   E++  +     
Sbjct: 146 AADG-PMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPDLLELVEMELRELLTFY--KFP 202

Query: 208 ADKAPVVPISA-----QLKYNI---------DVVCEYIVKKIPIPERNFISPPNMIVIRS 253
            D+ P+V  SA        Y +         D V EYI + +   ++ F+ P   I    
Sbjct: 203 GDEIPIVRGSALHALQGTNYELGKKAILELMDAVDEYISEPVRQLDKPFLMPIEDI---- 258

Query: 254 FDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGNIRCTPIYSRIVSL 313
           F +          +G VA G + +G +KV + +E+          G  +  P+ + + S+
Sbjct: 259 FSIQG--------RGTVATGRVEQGTIKVGEEVEIL---------GLKQGEPLKTTVTSV 301

Query: 314 CAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRL 373
              +  +     G  +G+   +   L R D   G V+ + G+L + + + E   ++L + 
Sbjct: 302 ETFKKTMDKGEGGDNVGL---LLRGLKRGDVQRGMVIAKPGTL-KTYKKFEAEIYVLSKD 357

Query: 374 LGVR 377
            G R
Sbjct: 358 EGGR 361


>Medtr7g094460.1 | GTP-binding elongation factor Tu family protein |
           HC | chr7:37594338-37599430 | 20130731
          Length = 449

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 116/286 (40%), Gaps = 81/286 (28%)

Query: 33  INIGTIGHVAHGKSTVVKAISGV-------QTVRFKN------ELERNITIKLGYANAKI 79
           +N+GTIGHV HGK+T+  AI+ V       + V F        E +R ITI   +     
Sbjct: 64  VNVGTIGHVDHGKTTLTAAITRVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVE--- 120

Query: 80  YKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLLRHVSFVDCPGHDILMATMLN 139
                                          +E  K    RH + VDCPGH   +  M+ 
Sbjct: 121 -------------------------------YETAK----RHYAHVDCPGHADYVKNMIT 145

Query: 140 GAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEVI 199
           GAA MDG +L+++A +  P PQT EH+     + +  ++   NKVD + +   +   E+ 
Sbjct: 146 GAAQMDGGILVVSAPDG-PMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEME 204

Query: 200 QKFIEGTV---ADKAPVV---PISAQLKYN-----------IDVVCEYIVKKIPIPERNF 242
            + +        D  P++    +SA    N           +D V EY    IP P R  
Sbjct: 205 LRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGRKAILKLMDAVDEY----IPDPVRQL 260

Query: 243 ISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEV 288
             P  M +   F +          +G VA G + +G++K+   +EV
Sbjct: 261 EKPFLMPIEDVFSIQG--------RGTVATGRVEQGIIKIGDEVEV 298


>Medtr3g076660.1 | elongation factor Tu protein | HC |
           chr3:34457933-34460232 | 20130731
          Length = 489

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 55/281 (19%)

Query: 29  RQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCS 88
           ++  +NIGTIGHV HGK+T+  A++                  LG +  K Y   DE  +
Sbjct: 89  KKPHLNIGTIGHVDHGKTTLTAALTMALA-------------SLGNSAPKKY---DEIDA 132

Query: 89  RPMSYRAYGSGKEDAPMCEVPGFENCKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGAL 148
            P   RA G     A +     +E       RH + VDCPGH   +  M+ GAA MDGA+
Sbjct: 133 AP-EERARGITINTATVE----YETET----RHYAHVDCPGHADYVKNMITGAAQMDGAI 183

Query: 149 LLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEVIQKFIEGTV- 207
           L+++  +  P PQT EH+   + + +  +++  NK D + +   +   E+  + +  +  
Sbjct: 184 LVVSGADG-PMPQTKEHILLAKQVGVPSVVVFLNKQDQVDDEELLELVELEVRELLSSYE 242

Query: 208 --ADKAPVVPISA-----------QLKYNIDVVCEYIVK-------KIPIPERNFISPPN 247
              D  P+V  SA            +K   +   + I K        IPIP+R    P  
Sbjct: 243 FPGDDIPIVSGSALLALEALVANPTIKRGDNEWVDKIYKLMDEVDNYIPIPQRQTELPFL 302

Query: 248 MIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEV 288
           + +   F +          +G VA G I RG++KV   +++
Sbjct: 303 LAIEDVFSITG--------RGTVATGRIERGLVKVGDVVDL 335