Miyakogusa Predicted Gene

Lj3g3v0951090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0951090.1 tr|Q655Z1|Q655Z1_ORYSJ Epstein-Barr virus
EBNA-1-like OS=Oryza sativa subsp. japonica
GN=P0633E08.30,68.18,4e-19,seg,NULL; coiled-coil,NULL,CUFF.41839.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0167s0040.1 | hypothetical protein | HC | scaffold0167:1673...    55   2e-08

>Medtr0167s0040.1 | hypothetical protein | HC |
           scaffold0167:16732-26266 | 20130731
          Length = 141

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 28/31 (90%)

Query: 76  HMEFQDLSNEDYFAKNNEFATWLKEEKNVFF 106
           +M FQ+LS +DYFAKN EFATWLKEEKNVF+
Sbjct: 76  NMNFQELSGDDYFAKNIEFATWLKEEKNVFY 106